RNA–Protein interactions for RNA: ENST00000506573.1

DDR1-258, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-258ENST00000506573 EMILIN3Q9NT22 766 aa18.67■□□□□ 0.58
DDR1-258ENST00000506573 GABRQQ9UN88 632 aa18.67■□□□□ 0.58
DDR1-258ENST00000506573 PDE4DIPQ5VU43 2346 aa18.66■□□□□ 0.58
DDR1-258ENST00000506573 GLRX3O76003 335 aaKnown RBP18.66■□□□□ 0.58
DDR1-258ENST00000506573 CCL5P13501 91 aa18.66■□□□□ 0.58
DDR1-258ENST00000506573 MAPK4P31152 587 aa18.66■□□□□ 0.58
DDR1-258ENST00000506573 SHROOM1Q2M3G4 852 aaPredicted RBP18.66■□□□□ 0.58
DDR1-258ENST00000506573 ARHGEF10LQ9HCE6 1279 aa18.66■□□□□ 0.58
DDR1-258ENST00000506573 ARPP21Q9UBL0 812 aaPredicted RBP18.66■□□□□ 0.58
DDR1-258ENST00000506573 PCDHB15Q9Y5E8 787 aa18.66■□□□□ 0.58
DDR1-258ENST00000506573 NAV1Q8NEY1 1877 aa18.65■□□□□ 0.58
DDR1-258ENST00000506573 GJB1P08034 283 aa18.65■□□□□ 0.58
DDR1-258ENST00000506573 GNAT2P19087 354 aa18.65■□□□□ 0.58
DDR1-258ENST00000506573 SOCS4Q8WXH5 440 aa18.65■□□□□ 0.58
DDR1-258ENST00000506573 GCC1Q96CN9 775 aa18.65■□□□□ 0.58
DDR1-258ENST00000506573 RBBP6Q7Z6E9 1792 aaKnown RBP18.65■□□□□ 0.58
DDR1-258ENST00000506573 USP17L12C9JPN9 530 aa18.64■□□□□ 0.57
DDR1-258ENST00000506573 USP17L21D6R901 530 aa18.64■□□□□ 0.57
DDR1-258ENST00000506573 RNF113AO15541 343 aaKnown RBP18.64■□□□□ 0.57
DDR1-258ENST00000506573 PRKAB2O43741 272 aa18.64■□□□□ 0.57
DDR1-258ENST00000506573 SEPT2Q15019 361 aa18.64■□□□□ 0.57
DDR1-258ENST00000506573 C12orf60Q5U649 245 aa18.64■□□□□ 0.57
DDR1-258ENST00000506573 GIMAP6Q6P9H5 292 aa18.64■□□□□ 0.57
DDR1-258ENST00000506573 TRMT44Q8IYL2 757 aaKnown RBP18.64■□□□□ 0.57
DDR1-258ENST00000506573 APPBP2Q92624 585 aa18.64■□□□□ 0.57
DDR1-258ENST00000506573 PAGR1Q9BTK6 254 aa18.64■□□□□ 0.57
DDR1-258ENST00000506573 ZNF287Q9HBT7 754 aa18.64■□□□□ 0.57
DDR1-258ENST00000506573 RABGAP1Q9Y3P9 1069 aa18.64■□□□□ 0.57
DDR1-258ENST00000506573 KIAA0100Q14667 2235 aaKnown RBP18.64■□□□□ 0.57
DDR1-258ENST00000506573 ZSWIM8A7E2V4 1837 aa18.63■□□□□ 0.57
DDR1-258ENST00000506573 INHAP05111 366 aa18.63■□□□□ 0.57
DDR1-258ENST00000506573 CYP2D6P10635 497 aa18.63■□□□□ 0.57
DDR1-258ENST00000506573 VCAM1P19320 739 aa18.63■□□□□ 0.57
DDR1-258ENST00000506573 GJA8P48165 433 aa18.63■□□□□ 0.57
DDR1-258ENST00000506573 ERVK-9P63128 1117 aa18.63■□□□□ 0.57
DDR1-258ENST00000506573 ERVK-24P63145 666 aa18.63■□□□□ 0.57
DDR1-258ENST00000506573 MTFR1Q15390 333 aa18.63■□□□□ 0.57
DDR1-258ENST00000506573 CATSPERGQ6ZRH7 1159 aa18.63■□□□□ 0.57
DDR1-258ENST00000506573 CRBNQ96SW2 442 aa18.63■□□□□ 0.57
DDR1-258ENST00000506573 NUDT12Q9BQG2 462 aa18.63■□□□□ 0.57
DDR1-258ENST00000506573 PUS7LQ9H0K6 701 aaKnown RBP18.63■□□□□ 0.57
DDR1-258ENST00000506573 HMGCRP04035 888 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 APPP05067 770 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 ELNP15502 786 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 MX1P20591 662 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 CDK8P49336 464 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 ICA1Q05084 483 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 SLFNL1Q499Z3 407 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 C16orf86Q6ZW13 317 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 ACER1Q8TDN7 264 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 LPAR1Q92633 364 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 DYNLL2Q96FJ2 89 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 STRBPQ96SI9 672 aaKnown RBP18.62■□□□□ 0.57
DDR1-258ENST00000506573 NACAP1Q9BZK3 213 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 RPAP3Q9H6T3 665 aaPredicted RBP18.62■□□□□ 0.57
DDR1-258ENST00000506573 HOXC10Q9NYD6 342 aa18.62■□□□□ 0.57
DDR1-258ENST00000506573 MGAMO43451 1857 aa18.61■□□□□ 0.57
DDR1-258ENST00000506573 ANKRD45Q5TZF3 282 aa18.61■□□□□ 0.57
DDR1-258ENST00000506573 TSHZ3Q63HK5 1081 aa18.61■□□□□ 0.57
DDR1-258ENST00000506573 CTR9Q6PD62 1173 aa18.61■□□□□ 0.57
DDR1-258ENST00000506573 FSD1Q9BTV5 496 aa18.61■□□□□ 0.57
DDR1-258ENST00000506573 TANGO6Q9C0B7 1094 aa18.61■□□□□ 0.57
DDR1-258ENST00000506573 MKNK2Q9HBH9 465 aa18.61■□□□□ 0.57
DDR1-258ENST00000506573 RBPJLQ9UBG7 517 aa18.61■□□□□ 0.57
DDR1-258ENST00000506573 DDX60LQ5H9U9 1706 aaKnown RBP18.6■□□□□ 0.57
DDR1-258ENST00000506573 GUCY1A2P33402 732 aa18.6■□□□□ 0.57
DDR1-258ENST00000506573 TDO2P48775 406 aa18.6■□□□□ 0.57
DDR1-258ENST00000506573 HDAC1Q13547 482 aaPredicted RBP18.6■□□□□ 0.57
DDR1-258ENST00000506573 COG2Q14746 738 aa18.6■□□□□ 0.57
DDR1-258ENST00000506573 SBK1Q52WX2 424 aa18.6■□□□□ 0.57
DDR1-258ENST00000506573 PLEKHH3Q7Z736 793 aa18.6■□□□□ 0.57
DDR1-258ENST00000506573 SLC44A5Q8NCS7 719 aa18.6■□□□□ 0.57
DDR1-258ENST00000506573 HTATIP2Q9BUP3 242 aa18.6■□□□□ 0.57
DDR1-258ENST00000506573 KANSL2Q9H9L4 492 aa18.6■□□□□ 0.57
DDR1-258ENST00000506573 IVNS1ABPQ9Y6Y0 642 aa18.6■□□□□ 0.57
DDR1-258ENST00000506573 GPAA1O43292 621 aa18.59■□□□□ 0.57
DDR1-258ENST00000506573 TFRCP02786 760 aaKnown RBP18.59■□□□□ 0.57
DDR1-258ENST00000506573 SLC3A2P08195 630 aaKnown RBP18.59■□□□□ 0.57
DDR1-258ENST00000506573 XRCC5P13010 732 aaKnown RBP18.59■□□□□ 0.57
DDR1-258ENST00000506573 RGS2P41220 211 aa18.59■□□□□ 0.57
DDR1-258ENST00000506573 WDR78Q5VTH9 848 aa18.59■□□□□ 0.57
DDR1-258ENST00000506573 LBX2Q6XYB7 198 aa18.59■□□□□ 0.57
DDR1-258ENST00000506573 U2AF1L4Q8WU68 220 aaKnown RBP18.59■□□□□ 0.57
DDR1-258ENST00000506573 UNC93B1Q9H1C4 597 aa18.59■□□□□ 0.57
DDR1-258ENST00000506573 RWDD1Q9H446 243 aaPredicted RBP18.59■□□□□ 0.57
DDR1-258ENST00000506573 TXNRD2Q9NNW7 524 aa18.59■□□□□ 0.57
DDR1-258ENST00000506573 CYP2D7A0A087X1C5 515 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 MINDY4BA8MYZ0 360 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 SGPL1O95470 568 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 AKR1B1P15121 316 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 ATP2B2Q01814 1243 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 GPR142Q7Z601 462 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 MB21D1Q8N884 522 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 OSBP2Q969R2 916 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 GOPCQ9HD26 462 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 HMX1Q9NP08 348 aaPredicted RBP18.58■□□□□ 0.56
DDR1-258ENST00000506573 GJD2Q9UKL4 321 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 TMX2Q9Y320 296 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 BRCA2P51587 3418 aa18.58■□□□□ 0.56
DDR1-258ENST00000506573 MYH7P12883 1935 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms