RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 RILPL1Q5EBL4 403 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 MPRIPQ6WCQ1 1025 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 ANGEL1Q9UNK9 670 aaKnown RBP17.95■□□□□ 0.46
SCLT1-208ENST00000506368 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 METAP2P50579 478 aaKnown RBP eCLIP17.95■□□□□ 0.46
SCLT1-208ENST00000506368 WWC2Q6AWC2 1192 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 TTLL5Q6EMB2 1281 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 CNPY4Q8N129 248 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 ZCRB1Q8TBF4 217 aaKnown RBP17.95■□□□□ 0.46
SCLT1-208ENST00000506368 MYD88Q99836 296 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 SAMSN1Q9NSI8 373 aaKnown RBP17.95■□□□□ 0.46
SCLT1-208ENST00000506368 DONSONQ9NYP3 566 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 CEP83Q9Y592 693 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 FAM169AQ9Y6X4 670 aa17.95■□□□□ 0.46
SCLT1-208ENST00000506368 ZC3H4Q9UPT8 1303 aaKnown RBP17.95■□□□□ 0.46
SCLT1-208ENST00000506368 IFIT1P09914 478 aaKnown RBP17.94■□□□□ 0.46
SCLT1-208ENST00000506368 DDR1Q08345 913 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 AIMP1Q12904 312 aaKnown RBP17.94■□□□□ 0.46
SCLT1-208ENST00000506368 UBE3BQ7Z3V4 1068 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 NDUFB9Q9Y6M9 179 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 SYNRGQ9UMZ2 1314 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 GOLGA6CA6NDK9 693 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 CYP27B1O15528 508 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 PPFIA3O75145 1194 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 CLSTN1O94985 981 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 CHGBP05060 677 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 GOLGA6DP0CG33 693 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 ARHGAP25P42331 645 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 SAFBQ15424 915 aaKnown RBP eCLIP17.94■□□□□ 0.46
SCLT1-208ENST00000506368 NOA1Q8NC60 698 aaKnown RBP17.94■□□□□ 0.46
SCLT1-208ENST00000506368 ZBTB9Q96C00 473 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 TMEM87BQ96K49 555 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 CLIC6Q96NY7 704 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 GOLGA6AQ9NYA3 693 aa17.94■□□□□ 0.46
SCLT1-208ENST00000506368 KAT6BQ8WYB5 2073 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 ZNF213O14771 459 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 OPA1O60313 960 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 INPP5BP32019 993 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 IRAK1P51617 712 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 ANTXR2P58335 489 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 SLC9C2Q5TAH2 1124 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 PAPD7Q5XG87 772 aaKnown RBP17.93■□□□□ 0.46
SCLT1-208ENST00000506368 ANKRD13DQ6ZTN6 518 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 AMOTL1Q8IY63 956 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 ZNF622Q969S3 477 aaKnown RBP eCLIP17.93■□□□□ 0.461e-6■□□□□ 9.1
SCLT1-208ENST00000506368 ABHD10Q9NUJ1 306 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 TBC1D2BQ9UPU7 963 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 TNS2Q63HR2 1409 aa17.93■□□□□ 0.46
SCLT1-208ENST00000506368 LRRC10BA6NIK2 292 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 M0R2C6 588 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 EIF3HO15372 352 aaKnown RBP eCLIP17.92■□□□□ 0.46
SCLT1-208ENST00000506368 HNRNPH1P31943 449 aaKnown RBP17.92■□□□□ 0.46
SCLT1-208ENST00000506368 CASP14P31944 242 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 MNAT1P51948 309 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 AKAP17AQ02040 695 aaKnown RBP17.92■□□□□ 0.46
SCLT1-208ENST00000506368 PTPN21Q16825 1174 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 MARCH10Q8NA82 808 aaPredicted RBP17.92■□□□□ 0.46
SCLT1-208ENST00000506368 CDC5LQ99459 802 aaKnown RBP17.92■□□□□ 0.46
SCLT1-208ENST00000506368 CAPS2Q9BXY5 557 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 FBXO2Q9UK22 296 aaPredicted RBP17.92■□□□□ 0.46
SCLT1-208ENST00000506368 SAR1BQ9Y6B6 198 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 ECM29Q5VYK3 1845 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 GYPCP04921 128 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 IARSP41252 1262 aaKnown RBP17.92■□□□□ 0.46
SCLT1-208ENST00000506368 NOSTRINQ8IVI9 506 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 PRPF38AQ8NAV1 312 aaKnown RBP17.92■□□□□ 0.46
SCLT1-208ENST00000506368 GSDMAQ96QA5 445 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 SERTAD1Q9UHV2 236 aa17.92■□□□□ 0.46
SCLT1-208ENST00000506368 SRPRBQ9Y5M8 271 aaKnown RBP17.92■□□□□ 0.46
SCLT1-208ENST00000506368 ANO9A1A5B4 782 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 POLR2DO15514 142 aaKnown RBP17.91■□□□□ 0.46
SCLT1-208ENST00000506368 TEX33O43247 280 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 ACTN4O43707 911 aaKnown RBP17.91■□□□□ 0.46
SCLT1-208ENST00000506368 ZEB2O60315 1214 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 CIAO1O76071 339 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 FGAP02671 866 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 EPB41P11171 864 aaKnown RBP17.91■□□□□ 0.46
SCLT1-208ENST00000506368 ITIH3Q06033 890 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 MICALCLQ6ZW33 695 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 TRMT44Q8IYL2 757 aaKnown RBP17.91■□□□□ 0.46
SCLT1-208ENST00000506368 APPBP2Q92624 585 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 PAGR1Q9BTK6 254 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 CDCA7Q9BWT1 371 aaPredicted RBP17.91■□□□□ 0.46
SCLT1-208ENST00000506368 FOXP1Q9H334 677 aaPredicted RBP17.91■□□□□ 0.46
SCLT1-208ENST00000506368 LIMA1Q9UHB6 759 aaKnown RBP17.91■□□□□ 0.46
SCLT1-208ENST00000506368 FAM184BQ9ULE4 1060 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 GOLGA6BA6NDN3 693 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 SKOR1P84550 965 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 CUL4BQ13620 913 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 WASHC4Q2M389 1173 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 YTHDF3Q7Z739 585 aaKnown RBP17.91■□□□□ 0.46
SCLT1-208ENST00000506368 GPATCH11Q8N954 259 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 XAGE3Q8WTP9 111 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 NEUROD6Q96NK8 337 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 MED15Q96RN5 788 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 GPHNQ9NQX3 736 aaPredicted RBP17.91■□□□□ 0.46
SCLT1-208ENST00000506368 GJB4Q9NTQ9 266 aa17.91■□□□□ 0.46
SCLT1-208ENST00000506368 NID2Q14112 1375 aa17.9■□□□□ 0.46
SCLT1-208ENST00000506368 A0A0G2JLW4 131 aa17.9■□□□□ 0.46
SCLT1-208ENST00000506368 GGCXP38435 758 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms