RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 PFASO15067 1338 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 IGSF3O75054 1194 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 UQCRFS1P1P0C7P4 283 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 PLCG2P16885 1265 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 SYN1P17600 705 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 PPP4CP60510 307 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 HERVK_113P62684 666 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 MTMR2Q13614 643 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 GORABQ5T7V8 394 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 PI16Q6UXB8 463 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 FOXP4Q8IVH2 680 aaPredicted RBP12.89□□□□□ -0.35
CPNE4-206ENST00000505957 NOL10Q9BSC4 688 aaKnown RBP12.89□□□□□ -0.35
CPNE4-206ENST00000505957 ECHDC1Q9NTX5 307 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 MTMR10Q9NXD2 777 aa12.89□□□□□ -0.35
CPNE4-206ENST00000505957 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.89□□□□□ -0.35
CPNE4-206ENST00000505957 USP17L10C9JJH3 530 aa12.88□□□□□ -0.35
CPNE4-206ENST00000505957 BAG3O95817 575 aa12.88□□□□□ -0.35
CPNE4-206ENST00000505957 IFIT2P09913 472 aaKnown RBP12.88□□□□□ -0.35
CPNE4-206ENST00000505957 MCAMP43121 646 aa12.88□□□□□ -0.35
CPNE4-206ENST00000505957 CACNB2Q08289 660 aaPredicted RBP12.88□□□□□ -0.35
CPNE4-206ENST00000505957 SH3RF3Q8TEJ3 882 aaPredicted RBP12.88□□□□□ -0.35
CPNE4-206ENST00000505957 C22orf23Q9BZE7 217 aa12.88□□□□□ -0.35
CPNE4-206ENST00000505957 UBE2OQ9C0C9 1292 aaKnown RBP12.88□□□□□ -0.35
CPNE4-206ENST00000505957 TXNRD2Q9NNW7 524 aa12.88□□□□□ -0.35
CPNE4-206ENST00000505957 LRP2BPQ9P2M1 347 aa12.88□□□□□ -0.35
CPNE4-206ENST00000505957 RBPJLQ9UBG7 517 aa12.88□□□□□ -0.35
CPNE4-206ENST00000505957 CUL9Q8IWT3 2517 aa12.88□□□□□ -0.35
CPNE4-206ENST00000505957 ZKSCAN1P17029 563 aaPredicted RBP12.87□□□□□ -0.35
CPNE4-206ENST00000505957 RGS2P41220 211 aa12.87□□□□□ -0.35
CPNE4-206ENST00000505957 MFAP1P55081 439 aaKnown RBP12.87□□□□□ -0.35
CPNE4-206ENST00000505957 ERVK-9P63128 1117 aa12.87□□□□□ -0.35
CPNE4-206ENST00000505957 ERVK-24P63145 666 aa12.87□□□□□ -0.35
CPNE4-206ENST00000505957 MORN1Q5T089 497 aa12.87□□□□□ -0.35
CPNE4-206ENST00000505957 LHX8Q68G74 356 aa12.87□□□□□ -0.35
CPNE4-206ENST00000505957 Q7L0L9 218 aa12.87□□□□□ -0.35
CPNE4-206ENST00000505957 AACSQ86V21 672 aa12.87□□□□□ -0.35
CPNE4-206ENST00000505957 TICAM2Q86XR7 235 aa12.87□□□□□ -0.35
CPNE4-206ENST00000505957 EAF2Q96CJ1 260 aaPredicted RBP12.87□□□□□ -0.35
CPNE4-206ENST00000505957 DNAJC18Q9H819 358 aa12.87□□□□□ -0.35
CPNE4-206ENST00000505957 COL6A3P12111 3177 aa12.86□□□□□ -0.35
CPNE4-206ENST00000505957 DDX60LQ5H9U9 1706 aaKnown RBP12.86□□□□□ -0.35
CPNE4-206ENST00000505957 JAG1P78504 1218 aa12.86□□□□□ -0.35
CPNE4-206ENST00000505957 Q3C1V9 767 aa12.86□□□□□ -0.35
CPNE4-206ENST00000505957 TNNI3KQ59H18 835 aa12.86□□□□□ -0.35
CPNE4-206ENST00000505957 NAA16Q6N069 864 aaPredicted RBP12.86□□□□□ -0.35
CPNE4-206ENST00000505957 GPR142Q7Z601 462 aa12.86□□□□□ -0.35
CPNE4-206ENST00000505957 PLEKHH3Q7Z736 793 aa12.86□□□□□ -0.35
CPNE4-206ENST00000505957 CCAR1Q8IX12 1150 aaKnown RBP12.86□□□□□ -0.35
CPNE4-206ENST00000505957 APBA2Q99767 749 aa12.86□□□□□ -0.35
CPNE4-206ENST00000505957 AATFQ9NY61 560 aaKnown RBP eCLIP12.86□□□□□ -0.35
CPNE4-206ENST00000505957 FPGT-TNNI3KV9GXZ4 949 aa12.86□□□□□ -0.35
CPNE4-206ENST00000505957 FLT1P17948 1338 aa12.86□□□□□ -0.35
CPNE4-206ENST00000505957 PLXNB2O15031 1838 aa12.85□□□□□ -0.35
CPNE4-206ENST00000505957 PEX10O60683 326 aa12.85□□□□□ -0.35
CPNE4-206ENST00000505957 REC8O95072 547 aa12.85□□□□□ -0.35
CPNE4-206ENST00000505957 LRRC26Q2I0M4 334 aa12.85□□□□□ -0.35
CPNE4-206ENST00000505957 FAM109BQ6ICB4 259 aaPredicted RBP12.85□□□□□ -0.35
CPNE4-206ENST00000505957 USP17L2Q6R6M4 530 aa12.85□□□□□ -0.35
CPNE4-206ENST00000505957 CRACR2BQ8N4Y2 399 aaPredicted RBP12.85□□□□□ -0.35
CPNE4-206ENST00000505957 TGFBRAP1Q8WUH2 860 aa12.85□□□□□ -0.35
CPNE4-206ENST00000505957 TRIM34Q9BYJ4 488 aa12.85□□□□□ -0.35
CPNE4-206ENST00000505957 PORCNQ9H237 461 aa12.85□□□□□ -0.35
CPNE4-206ENST00000505957 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
CPNE4-206ENST00000505957 ZBTB21Q9ULJ3 1066 aa12.85□□□□□ -0.35
CPNE4-206ENST00000505957 ATAD5Q96QE3 1844 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 GDF11O95390 407 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 HLA-DOAP06340 250 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 CHMLP26374 656 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 CCND3P30281 292 aaPredicted RBP12.84□□□□□ -0.35
CPNE4-206ENST00000505957 MAP2K5Q13163 448 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 CCL14Q16627 93 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 TSHZ3Q63HK5 1081 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 POTEEQ6S8J3 1075 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 MAPKAPK5Q8IW41 473 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 ZNF512BQ96KM6 892 aaPredicted RBP12.84□□□□□ -0.35
CPNE4-206ENST00000505957 C12orf42Q96LP6 360 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 PALD1Q9ULE6 856 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 RABGAP1Q9Y3P9 1069 aa12.84□□□□□ -0.35
CPNE4-206ENST00000505957 POTEB2H3BUK9 544 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 ATP5JP18859 108 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 CCNA1P78396 465 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 CCDC158Q5M9N0 1113 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 TTC39AQ5SRH9 613 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 ADGRA1Q86SQ6 560 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 IL27Q8NEV9 243 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.83□□□□□ -0.36
CPNE4-206ENST00000505957 EVI5LQ96CN4 794 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 IL17RAQ96F46 866 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 EDC3Q96F86 508 aaKnown RBP12.83□□□□□ -0.36
CPNE4-206ENST00000505957 ESYT1Q9BSJ8 1104 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 PAGR1Q9BTK6 254 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 A0A0C4DFX4 3053 aa12.83□□□□□ -0.36
CPNE4-206ENST00000505957 SLC15A5A6NIM6 579 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 TRIM6-TRIM34B2RNG4 842 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 USP17L15C9J2P7 530 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 USP17L13C9JLJ4 530 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 USP17L11C9JVI0 530 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 USP17L18D6R9N7 530 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 USP17L22D6RA61 530 aa12.82□□□□□ -0.36
CPNE4-206ENST00000505957 USP17L17D6RBQ6 530 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms