RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 XRCC5P13010 732 aaKnown RBP24.13■■□□□ 1.45
UBE2D3-220ENST00000505307 ERVK-9P63128 1117 aa24.13■■□□□ 1.45
UBE2D3-220ENST00000505307 ERVK-24P63145 666 aa24.13■■□□□ 1.45
UBE2D3-220ENST00000505307 TRMT44Q8IYL2 757 aaKnown RBP24.13■■□□□ 1.45
UBE2D3-220ENST00000505307 HAUS7Q99871 368 aa24.13■■□□□ 1.45
UBE2D3-220ENST00000505307 LRRCC1Q9C099 1032 aa24.13■■□□□ 1.45
UBE2D3-220ENST00000505307 CRISPLD2Q9H0B8 497 aa24.13■■□□□ 1.45
UBE2D3-220ENST00000505307 BOLA2Q9H3K6 86 aa24.13■■□□□ 1.45
UBE2D3-220ENST00000505307 TXNRD2Q9NNW7 524 aa24.13■■□□□ 1.45
UBE2D3-220ENST00000505307 DCP1AQ9NPI6 582 aaPredicted RBP24.13■■□□□ 1.45
UBE2D3-220ENST00000505307 RABGAP1Q9Y3P9 1069 aa24.13■■□□□ 1.45
UBE2D3-220ENST00000505307 RPTORQ8N122 1335 aa24.12■■□□□ 1.45
UBE2D3-220ENST00000505307 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.12■■□□□ 1.452e-17■■□□□ 14.3
UBE2D3-220ENST00000505307 BCL11AQ9H165 835 aa24.12■■□□□ 1.45
UBE2D3-220ENST00000505307 NR2E3Q9Y5X4 410 aa24.12■■□□□ 1.45
UBE2D3-220ENST00000505307 ADD2P35612 726 aa24.11■■□□□ 1.45
UBE2D3-220ENST00000505307 CCNA1P78396 465 aa24.11■■□□□ 1.45
UBE2D3-220ENST00000505307 CATSPERGQ6ZRH7 1159 aa24.11■■□□□ 1.45
UBE2D3-220ENST00000505307 LCORLQ8N3X6 602 aa24.11■■□□□ 1.45
UBE2D3-220ENST00000505307 HMX1Q9NP08 348 aaPredicted RBP24.11■■□□□ 1.45
UBE2D3-220ENST00000505307 ATP8A2Q9NTI2 1148 aa24.11■■□□□ 1.45
UBE2D3-220ENST00000505307 SWAP70Q9UH65 585 aa24.11■■□□□ 1.45
UBE2D3-220ENST00000505307 ZYXQ15942 572 aaKnown RBP24.1■■□□□ 1.45
UBE2D3-220ENST00000505307 ZSCAN25Q6NSZ9 544 aa24.1■■□□□ 1.45
UBE2D3-220ENST00000505307 LBX2Q6XYB7 198 aa24.1■■□□□ 1.45
UBE2D3-220ENST00000505307 ANKLE1Q8NAG6 615 aa24.1■■□□□ 1.45
UBE2D3-220ENST00000505307 SDR42E1Q8WUS8 393 aa24.1■■□□□ 1.45
UBE2D3-220ENST00000505307 EDC3Q96F86 508 aaKnown RBP24.1■■□□□ 1.45
UBE2D3-220ENST00000505307 PAGR1Q9BTK6 254 aa24.1■■□□□ 1.45
UBE2D3-220ENST00000505307 CEP290O15078 2479 aa24.1■■□□□ 1.45
UBE2D3-220ENST00000505307 DDX60LQ5H9U9 1706 aaKnown RBP24.1■■□□□ 1.45
UBE2D3-220ENST00000505307 GLRX3O76003 335 aaKnown RBP24.09■■□□□ 1.45
UBE2D3-220ENST00000505307 VCAM1P19320 739 aa24.09■■□□□ 1.45
UBE2D3-220ENST00000505307 CYP2B6P20813 491 aa24.09■■□□□ 1.45
UBE2D3-220ENST00000505307 UBE3CQ15386 1083 aa24.09■■□□□ 1.45
UBE2D3-220ENST00000505307 Q3C1V9 767 aa24.09■■□□□ 1.45
UBE2D3-220ENST00000505307 C20orf194Q5TEA3 1177 aa24.09■■□□□ 1.45
UBE2D3-220ENST00000505307 ACER1Q8TDN7 264 aa24.09■■□□□ 1.45
UBE2D3-220ENST00000505307 ARMT1Q9H993 441 aa24.09■■□□□ 1.45
UBE2D3-220ENST00000505307 GUCY1A2P33402 732 aa24.08■■□□□ 1.45
UBE2D3-220ENST00000505307 RGS2P41220 211 aa24.08■■□□□ 1.45
UBE2D3-220ENST00000505307 GPR142Q7Z601 462 aa24.08■■□□□ 1.45
UBE2D3-220ENST00000505307 PLEKHH3Q7Z736 793 aa24.08■■□□□ 1.45
UBE2D3-220ENST00000505307 AMOTL1Q8IY63 956 aa24.08■■□□□ 1.45
UBE2D3-220ENST00000505307 DDRGK1Q96HY6 314 aa24.08■■□□□ 1.45
UBE2D3-220ENST00000505307 CWC22Q9HCG8 908 aaKnown RBP24.08■■□□□ 1.45
UBE2D3-220ENST00000505307 COLQQ9Y215 455 aaPredicted RBP24.08■■□□□ 1.45
UBE2D3-220ENST00000505307 NAV1Q8NEY1 1877 aa24.08■■□□□ 1.45
UBE2D3-220ENST00000505307 MPHOSPH10O00566 681 aaKnown RBP24.07■■□□□ 1.44
UBE2D3-220ENST00000505307 MBD4O95243 580 aa24.07■■□□□ 1.44
UBE2D3-220ENST00000505307 SEPT2Q15019 361 aa24.07■■□□□ 1.44
UBE2D3-220ENST00000505307 TMEM179Q6ZVK1 233 aa24.07■■□□□ 1.44
UBE2D3-220ENST00000505307 TRIB2Q92519 343 aa24.07■■□□□ 1.44
UBE2D3-220ENST00000505307 USP6NLQ92738 828 aa24.07■■□□□ 1.44
UBE2D3-220ENST00000505307 PORCNQ9H237 461 aa24.07■■□□□ 1.44
UBE2D3-220ENST00000505307 PEX10O60683 326 aa24.06■■□□□ 1.44
UBE2D3-220ENST00000505307 MORN1Q5T089 497 aa24.06■■□□□ 1.44
UBE2D3-220ENST00000505307 MAP3K21Q5TCX8 1036 aa24.06■■□□□ 1.44
UBE2D3-220ENST00000505307 POTEEQ6S8J3 1075 aa24.06■■□□□ 1.44
UBE2D3-220ENST00000505307 NECAB2Q7Z6G3 386 aa24.06■■□□□ 1.44
UBE2D3-220ENST00000505307 CCDC17Q96LX7 622 aa24.06■■□□□ 1.44
UBE2D3-220ENST00000505307 ZKSCAN1P17029 563 aaPredicted RBP24.05■■□□□ 1.44
UBE2D3-220ENST00000505307 RPAP3Q9H6T3 665 aaPredicted RBP24.05■■□□□ 1.44
UBE2D3-220ENST00000505307 ECHDC1Q9NTX5 307 aa24.05■■□□□ 1.44
UBE2D3-220ENST00000505307 HOXC10Q9NYD6 342 aa24.05■■□□□ 1.44
UBE2D3-220ENST00000505307 CNMDO75829 334 aa24.04■■□□□ 1.44
UBE2D3-220ENST00000505307 GPATCH3Q96I76 525 aa24.04■■□□□ 1.44
UBE2D3-220ENST00000505307 PAWRQ96IZ0 340 aaKnown RBP24.04■■□□□ 1.44
UBE2D3-220ENST00000505307 APBA2Q99767 749 aa24.04■■□□□ 1.44
UBE2D3-220ENST00000505307 DCTPP1Q9H773 170 aa24.04■■□□□ 1.44
UBE2D3-220ENST00000505307 SH2D4AQ9H788 454 aa24.04■■□□□ 1.44
UBE2D3-220ENST00000505307 PLXNB2O15031 1838 aa24.04■■□□□ 1.44
UBE2D3-220ENST00000505307 PRKAB2O43741 272 aa24.03■■□□□ 1.44
UBE2D3-220ENST00000505307 EVI5O60447 810 aa24.03■■□□□ 1.44
UBE2D3-220ENST00000505307 CYP2D6P10635 497 aa24.03■■□□□ 1.44
UBE2D3-220ENST00000505307 PRKAR2AP13861 404 aaKnown RBP24.03■■□□□ 1.44
UBE2D3-220ENST00000505307 TRIM32Q13049 653 aa24.03■■□□□ 1.44
UBE2D3-220ENST00000505307 COG2Q14746 738 aa24.03■■□□□ 1.44
UBE2D3-220ENST00000505307 C12orf60Q5U649 245 aa24.03■■□□□ 1.44
UBE2D3-220ENST00000505307 LPAR1Q92633 364 aa24.03■■□□□ 1.44
UBE2D3-220ENST00000505307 SLC15A5A6NIM6 579 aa24.02■■□□□ 1.44
UBE2D3-220ENST00000505307 SPDYE16A6NNV3 312 aaPredicted RBP24.02■■□□□ 1.44
UBE2D3-220ENST00000505307 FXR1P51114 621 aaKnown RBP eCLIP24.02■■□□□ 1.44
UBE2D3-220ENST00000505307 MAP2K5Q13163 448 aa24.02■■□□□ 1.44
UBE2D3-220ENST00000505307 ARHGEF10LQ9HCE6 1279 aa24.02■■□□□ 1.44
UBE2D3-220ENST00000505307 OGDHLQ9ULD0 1010 aa24.02■■□□□ 1.44
UBE2D3-220ENST00000505307 IVNS1ABPQ9Y6Y0 642 aa24.02■■□□□ 1.44
UBE2D3-220ENST00000505307 A0A1W2PRG0 241 aa24.01■■□□□ 1.43
UBE2D3-220ENST00000505307 USP17L12C9JPN9 530 aa24.01■■□□□ 1.43
UBE2D3-220ENST00000505307 USP17L21D6R901 530 aa24.01■■□□□ 1.43
UBE2D3-220ENST00000505307 SMARCA5O60264 1052 aaPredicted RBP24.01■■□□□ 1.43
UBE2D3-220ENST00000505307 EVX2Q03828 476 aa24.01■■□□□ 1.43
UBE2D3-220ENST00000505307 CHRDL2Q6WN34 429 aa24.01■■□□□ 1.43
UBE2D3-220ENST00000505307 SLC44A5Q8NCS7 719 aa24.01■■□□□ 1.43
UBE2D3-220ENST00000505307 DYNLL2Q96FJ2 89 aa24.01■■□□□ 1.43
UBE2D3-220ENST00000505307 NBPF3Q9H094 633 aa24.01■■□□□ 1.43
UBE2D3-220ENST00000505307 SLC4A4Q9Y6R1 1079 aa24.01■■□□□ 1.43
UBE2D3-220ENST00000505307 PTPREP23469 700 aa24■■□□□ 1.43
UBE2D3-220ENST00000505307 CDK8P49336 464 aa24■■□□□ 1.43
UBE2D3-220ENST00000505307 CACNB2Q08289 660 aaPredicted RBP24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms