RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 POLR3DP05423 398 aaPredicted RBP20.17■□□□□ 0.82
SYNE4-207ENST00000505054 PTPRAP18433 802 aa20.17■□□□□ 0.82
SYNE4-207ENST00000505054 CHRDL2Q6WN34 429 aa20.17■□□□□ 0.82
SYNE4-207ENST00000505054 ZNF589Q86UQ0 364 aaPredicted RBP20.17■□□□□ 0.82
SYNE4-207ENST00000505054 CRACR2BQ8N4Y2 399 aaPredicted RBP20.17■□□□□ 0.82
SYNE4-207ENST00000505054 RNF208Q9H0X6 261 aa20.17■□□□□ 0.82
SYNE4-207ENST00000505054 DIAPH3Q9NSV4 1193 aa20.17■□□□□ 0.82
SYNE4-207ENST00000505054 BIN2Q9UBW5 565 aaPredicted RBP20.17■□□□□ 0.82
SYNE4-207ENST00000505054 SERPINB13Q9UIV8 391 aa20.17■□□□□ 0.82
SYNE4-207ENST00000505054 ZHX2Q9Y6X8 837 aa20.17■□□□□ 0.82
SYNE4-207ENST00000505054 USP17L12C9JPN9 530 aa20.16■□□□□ 0.82
SYNE4-207ENST00000505054 USP17L21D6R901 530 aa20.16■□□□□ 0.82
SYNE4-207ENST00000505054 GABPAQ06546 454 aa20.16■□□□□ 0.82
SYNE4-207ENST00000505054 MCMDC2Q4G0Z9 681 aa20.16■□□□□ 0.82
SYNE4-207ENST00000505054 C12orf60Q5U649 245 aa20.16■□□□□ 0.82
SYNE4-207ENST00000505054 GIMAP6Q6P9H5 292 aa20.16■□□□□ 0.82
SYNE4-207ENST00000505054 CTR9Q6PD62 1173 aa20.16■□□□□ 0.82
SYNE4-207ENST00000505054 DPF3Q92784 378 aa20.16■□□□□ 0.82
SYNE4-207ENST00000505054 DDRGK1Q96HY6 314 aa20.16■□□□□ 0.82
SYNE4-207ENST00000505054 PATL2C9JE40 543 aaKnown RBP20.15■□□□□ 0.82
SYNE4-207ENST00000505054 HIP1O00291 1037 aa20.15■□□□□ 0.82
SYNE4-207ENST00000505054 CTNND1O60716 968 aaKnown RBP20.15■□□□□ 0.82
SYNE4-207ENST00000505054 VPS53Q5VIR6 699 aa20.15■□□□□ 0.82
SYNE4-207ENST00000505054 GADL1Q6ZQY3 521 aa20.15■□□□□ 0.82
SYNE4-207ENST00000505054 TRIM34Q9BYJ4 488 aa20.15■□□□□ 0.82
SYNE4-207ENST00000505054 AFG3L2Q9Y4W6 797 aa20.15■□□□□ 0.82
SYNE4-207ENST00000505054 BAZ2AQ9UIF9 1905 aaKnown RBP20.14■□□□□ 0.81
SYNE4-207ENST00000505054 CCDC171Q6TFL3 1326 aa20.14■□□□□ 0.81
SYNE4-207ENST00000505054 SHMT1P34896 483 aa20.14■□□□□ 0.81
SYNE4-207ENST00000505054 CAP2P40123 477 aa20.14■□□□□ 0.81
SYNE4-207ENST00000505054 CWC27Q6UX04 472 aaKnown RBP20.14■□□□□ 0.81
SYNE4-207ENST00000505054 IFNL3Q8IZI9 196 aa20.14■□□□□ 0.81
SYNE4-207ENST00000505054 U2AF1L4Q8WU68 220 aaKnown RBP20.14■□□□□ 0.81
SYNE4-207ENST00000505054 DYNLL2Q96FJ2 89 aa20.14■□□□□ 0.81
SYNE4-207ENST00000505054 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.14■□□□□ 0.81
SYNE4-207ENST00000505054 ARPP21Q9UBL0 812 aaPredicted RBP20.14■□□□□ 0.81
SYNE4-207ENST00000505054 GABRQQ9UN88 632 aa20.14■□□□□ 0.81
SYNE4-207ENST00000505054 DOCK3Q8IZD9 2030 aa20.14■□□□□ 0.81
SYNE4-207ENST00000505054 FARP2O94887 1054 aaPredicted RBP20.13■□□□□ 0.81
SYNE4-207ENST00000505054 APPP05067 770 aa20.13■□□□□ 0.81
SYNE4-207ENST00000505054 TDO2P48775 406 aa20.13■□□□□ 0.81
SYNE4-207ENST00000505054 JAG1P78504 1218 aa20.13■□□□□ 0.81
SYNE4-207ENST00000505054 SHROOM1Q2M3G4 852 aaPredicted RBP20.13■□□□□ 0.81
SYNE4-207ENST00000505054 SBK1Q52WX2 424 aa20.13■□□□□ 0.81
SYNE4-207ENST00000505054 BMP2KLQ5H9B9 411 aa20.13■□□□□ 0.81
SYNE4-207ENST00000505054 TATDN1Q6P1N9 297 aa20.13■□□□□ 0.81
SYNE4-207ENST00000505054 SLC44A5Q8NCS7 719 aa20.13■□□□□ 0.81
SYNE4-207ENST00000505054 SMCR8Q8TEV9 937 aaPredicted RBP20.13■□□□□ 0.81
SYNE4-207ENST00000505054 IL25Q9H293 177 aa20.13■□□□□ 0.81
SYNE4-207ENST00000505054 ADCY3O60266 1144 aa20.12■□□□□ 0.81
SYNE4-207ENST00000505054 CHMLP26374 656 aa20.12■□□□□ 0.81
SYNE4-207ENST00000505054 CCDC84Q86UT8 332 aaPredicted RBP20.12■□□□□ 0.81
SYNE4-207ENST00000505054 NACAP1Q9BZK3 213 aa20.12■□□□□ 0.81
SYNE4-207ENST00000505054 UNC93B1Q9H1C4 597 aa20.12■□□□□ 0.81
SYNE4-207ENST00000505054 RBM27Q9P2N5 1060 aaKnown RBP20.12■□□□□ 0.81
SYNE4-207ENST00000505054 RANBP2P49792 3224 aaKnown RBP20.12■□□□□ 0.81
SYNE4-207ENST00000505054 ALPK3Q96L96 1907 aa20.12■□□□□ 0.81
SYNE4-207ENST00000505054 ROBO3Q96MS0 1386 aa20.11■□□□□ 0.81
SYNE4-207ENST00000505054 TRIM75PA6NK02 468 aa20.11■□□□□ 0.81
SYNE4-207ENST00000505054 TNPO2O14787 897 aaKnown RBP20.11■□□□□ 0.81
SYNE4-207ENST00000505054 GDF11O95390 407 aa20.11■□□□□ 0.81
SYNE4-207ENST00000505054 CAPN2P17655 700 aa20.11■□□□□ 0.81
SYNE4-207ENST00000505054 FLT3LGP49771 235 aa20.11■□□□□ 0.81
SYNE4-207ENST00000505054 IRF5Q13568 498 aa20.11■□□□□ 0.81
SYNE4-207ENST00000505054 AMOTL1Q8IY63 956 aa20.11■□□□□ 0.81
SYNE4-207ENST00000505054 PXYLP1Q8TE99 480 aa20.11■□□□□ 0.81
SYNE4-207ENST00000505054 AGTPBP1Q9UPW5 1226 aa20.11■□□□□ 0.81
SYNE4-207ENST00000505054 NR2E3Q9Y5X4 410 aa20.11■□□□□ 0.81
SYNE4-207ENST00000505054 SZT2Q5T011 3432 aa20.11■□□□□ 0.81
SYNE4-207ENST00000505054 INHAP05111 366 aa20.1■□□□□ 0.81
SYNE4-207ENST00000505054 HSPD1P10809 573 aaKnown RBP20.1■□□□□ 0.81
SYNE4-207ENST00000505054 C16orf86Q6ZW13 317 aa20.1■□□□□ 0.81
SYNE4-207ENST00000505054 NAPBQ9H115 298 aa20.1■□□□□ 0.81
SYNE4-207ENST00000505054 TAOK2Q9UL54 1235 aa20.1■□□□□ 0.81
SYNE4-207ENST00000505054 ZBTB21Q9ULJ3 1066 aa20.1■□□□□ 0.81
SYNE4-207ENST00000505054 MINDY4BA8MYZ0 360 aa20.09■□□□□ 0.81
SYNE4-207ENST00000505054 SGPL1O95470 568 aa20.09■□□□□ 0.81
SYNE4-207ENST00000505054 ELNP15502 786 aa20.09■□□□□ 0.81
SYNE4-207ENST00000505054 ALX1Q15699 326 aa20.09■□□□□ 0.81
SYNE4-207ENST00000505054 PRO3102Q9H379 93 aa20.09■□□□□ 0.81
SYNE4-207ENST00000505054 SWAP70Q9UH65 585 aa20.09■□□□□ 0.81
SYNE4-207ENST00000505054 PNMA3Q9UL41 463 aa20.09■□□□□ 0.81
SYNE4-207ENST00000505054 RAD50Q92878 1312 aa20.08■□□□□ 0.81
SYNE4-207ENST00000505054 CDK8P49336 464 aa20.08■□□□□ 0.81
SYNE4-207ENST00000505054 MFAP1P55081 439 aaKnown RBP20.08■□□□□ 0.81
SYNE4-207ENST00000505054 FAM110CQ1W6H9 321 aa20.08■□□□□ 0.81
SYNE4-207ENST00000505054 CERKLQ49MI3 558 aaPredicted RBP20.08■□□□□ 0.81
SYNE4-207ENST00000505054 PROCA1Q8NCQ7 364 aaPredicted RBP20.08■□□□□ 0.81
SYNE4-207ENST00000505054 ZMYM6O95789 1325 aa20.07■□□□□ 0.8
SYNE4-207ENST00000505054 GH2P01242 217 aa20.07■□□□□ 0.8
SYNE4-207ENST00000505054 ASNSP08243 561 aa20.07■□□□□ 0.8
SYNE4-207ENST00000505054 PPARAQ07869 468 aa20.07■□□□□ 0.8
SYNE4-207ENST00000505054 COA7Q96BR5 231 aa20.07■□□□□ 0.8
SYNE4-207ENST00000505054 PAK6Q9NQU5 681 aaPredicted RBP20.07■□□□□ 0.8
SYNE4-207ENST00000505054 GINM1Q9NU53 330 aa20.07■□□□□ 0.8
SYNE4-207ENST00000505054 FGAP02671 866 aa20.06■□□□□ 0.8
SYNE4-207ENST00000505054 ABCB5Q2M3G0 1257 aa20.06■□□□□ 0.8
SYNE4-207ENST00000505054 TREML2Q5T2D2 321 aa20.06■□□□□ 0.8
SYNE4-207ENST00000505054 STK11IPQ8N1F8 1099 aa20.06■□□□□ 0.8
SYNE4-207ENST00000505054 ANKRD13CQ8N6S4 541 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms