RNA–Protein interactions for RNA: ENST00000505020.1

CDH9-202, Transcript of cadherin 9, humanhuman

TSL 2

Gene CDH9, Length 1,836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-202ENST00000505020 ATAD2Q6PL18 1390 aa8.32□□□□□ -1.08
CDH9-202ENST00000505020 CPEP16870 476 aa8.32□□□□□ -1.08
CDH9-202ENST00000505020 PAX7P23759 505 aa8.32□□□□□ -1.08
CDH9-202ENST00000505020 GRK2P25098 689 aa8.32□□□□□ -1.08
CDH9-202ENST00000505020 SSRP1Q08945 709 aaKnown RBP8.32□□□□□ -1.08
CDH9-202ENST00000505020 COL9A2Q14055 689 aaPredicted RBP8.32□□□□□ -1.08
CDH9-202ENST00000505020 GPATCH4Q5T3I0 446 aaKnown RBP8.32□□□□□ -1.08
CDH9-202ENST00000505020 EPS8L3Q8TE67 593 aaKnown RBP8.32□□□□□ -1.08
CDH9-202ENST00000505020 CCT6BQ92526 530 aa8.32□□□□□ -1.08
CDH9-202ENST00000505020 EDEM1Q92611 657 aa8.32□□□□□ -1.08
CDH9-202ENST00000505020 MS4A3Q96HJ5 214 aa8.32□□□□□ -1.08
CDH9-202ENST00000505020 ATP6V0A4Q9HBG4 840 aa8.32□□□□□ -1.08
CDH9-202ENST00000505020 ACTR10Q9NZ32 417 aa8.32□□□□□ -1.08
CDH9-202ENST00000505020 TRIM35Q9UPQ4 493 aa8.32□□□□□ -1.08
CDH9-202ENST00000505020 GPSM3Q9Y4H4 160 aa8.32□□□□□ -1.08
CDH9-202ENST00000505020 FRMPD2Q68DX3 1309 aaPredicted RBP8.32□□□□□ -1.08
CDH9-202ENST00000505020 MPP1Q00013 466 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 FXNQ16595 210 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 INTS11Q5TA45 600 aaKnown RBP8.31□□□□□ -1.08
CDH9-202ENST00000505020 FAAH2Q6GMR7 532 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 ZSWIM2Q8NEG5 633 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 RSRP1Q9BUV0 290 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 TRMT1Q9NXH9 659 aaKnown RBP8.31□□□□□ -1.08
CDH9-202ENST00000505020 UTP6Q9NYH9 597 aaKnown RBP8.31□□□□□ -1.08
CDH9-202ENST00000505020 FNIP2Q9P278 1114 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 LRRFIP2Q9Y608 721 aaKnown RBP8.31□□□□□ -1.08
CDH9-202ENST00000505020 RAD54L2Q9Y4B4 1467 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 SERTM1A2A2V5 107 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 PYGLP06737 847 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 POTEJP0CG39 1038 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 GBP2P32456 591 aaPredicted RBP8.31□□□□□ -1.08
CDH9-202ENST00000505020 CCT2P78371 535 aaKnown RBP8.31□□□□□ -1.08
CDH9-202ENST00000505020 CACNB2Q08289 660 aaPredicted RBP8.31□□□□□ -1.08
CDH9-202ENST00000505020 STRN3Q13033 797 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 SPATA1Q5VX52 437 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 CCBE1Q6UXH8 406 aaPredicted RBP8.31□□□□□ -1.08
CDH9-202ENST00000505020 NUDT16L1Q9BRJ7 211 aaKnown RBP8.31□□□□□ -1.08
CDH9-202ENST00000505020 TRIM56Q9BRZ2 755 aaKnown RBP8.31□□□□□ -1.08
CDH9-202ENST00000505020 MAN1C1Q9NR34 630 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 EPS15L1Q9UBC2 864 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 GIMAP2Q9UG22 337 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 ZMYM5Q9UJ78 669 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 TSR3Q9UJK0 312 aaKnown RBP8.31□□□□□ -1.08
CDH9-202ENST00000505020 ZBTB21Q9ULJ3 1066 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 PPT2Q9UMR5 302 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 GPR52Q9Y2T5 361 aa8.31□□□□□ -1.08
CDH9-202ENST00000505020 NBPF26B4DH59 902 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 MICAL2O94851 1124 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 SLC34A2O95436 690 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 PDGFAP04085 211 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 SH3BGRP55822 239 aaPredicted RBP8.3□□□□□ -1.08
CDH9-202ENST00000505020 TMEM67Q5HYA8 995 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 FASTKD5Q7L8L6 764 aaKnown RBP8.3□□□□□ -1.08
CDH9-202ENST00000505020 TNS4Q8IZW8 715 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 ABTB2Q8N961 1025 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 MGARPQ8TDB4 240 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 SLC39A7Q92504 469 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 TTC17Q96AE7 1141 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 BARD1Q99728 777 aaKnown RBP8.3□□□□□ -1.08
CDH9-202ENST00000505020 MYD88Q99836 296 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 OSGEPQ9NPF4 335 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 DDX21Q9NR30 783 aaKnown RBP eCLIP8.3□□□□□ -1.08
CDH9-202ENST00000505020 MKS1Q9NXB0 559 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 NKIRAS2Q9NYR9 191 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 UBP1Q9NZI7 540 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 CGNQ9P2M7 1197 aaKnown RBP8.3□□□□□ -1.08
CDH9-202ENST00000505020 RCAN3Q9UKA8 241 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 LRFN2Q9ULH4 789 aa8.3□□□□□ -1.08
CDH9-202ENST00000505020 RTCAO00442 366 aaKnown RBP8.29□□□□□ -1.08
CDH9-202ENST00000505020 AKR1B10O60218 316 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 TLR5O60602 858 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 IL33O95760 270 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 ENPP1P22413 925 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 AK2P54819 239 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 ADCY1Q08828 1119 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 USP4Q13107 963 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 RNF219Q5W0B1 726 aaPredicted RBP8.29□□□□□ -1.08
CDH9-202ENST00000505020 RETSATQ6NUM9 610 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 FBXL19Q6PCT2 694 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 SPATA5Q8NB90 893 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 GCC1Q96CN9 775 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 NT5C1AQ9BXI3 368 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 NAA15Q9BXJ9 866 aaKnown RBP8.29□□□□□ -1.08
CDH9-202ENST00000505020 SLC13A1Q9BZW2 595 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 HELLSQ9NRZ9 838 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 PPARGC1AQ9UBK2 798 aaKnown RBP8.29□□□□□ -1.08
CDH9-202ENST00000505020 A0A1W2PRU2 124 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 GIPC1O14908 333 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 GPR39O43194 453 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 MAP3K6O95382 1288 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 GJB6O95452 261 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 GARTP22102 1010 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 RPS6KB1P23443 525 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 MRE11P49959 708 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 GABREP78334 506 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 ARHGAP29Q52LW3 1261 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 GPR158Q5T848 1215 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 NUGGCQ68CJ6 796 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 CYB5RLQ6IPT4 315 aa8.29□□□□□ -1.08
CDH9-202ENST00000505020 GALNT17Q6IS24 598 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms