RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 GJB2P29033 226 aa12.19□□□□□ -0.46
TPM3-217ENST00000504663 DSG3P32926 999 aa12.19□□□□□ -0.46
TPM3-217ENST00000504663 CCT2P78371 535 aaKnown RBP12.19□□□□□ -0.46
TPM3-217ENST00000504663 FUT2Q10981 343 aa12.19□□□□□ -0.46
TPM3-217ENST00000504663 SLC35G1Q2M3R5 365 aa12.19□□□□□ -0.46
TPM3-217ENST00000504663 CLEC10AQ8IUN9 316 aa12.19□□□□□ -0.46
TPM3-217ENST00000504663 LLPHQ9BRT6 129 aaKnown RBP12.19□□□□□ -0.46
TPM3-217ENST00000504663 PI4KBQ9UBF8 816 aa12.19□□□□□ -0.46
TPM3-217ENST00000504663 PHIPQ8WWQ0 1821 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 TSPY2A6NKD2 308 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 ZBTB43O43298 467 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 FGD1P98174 961 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 NBPF11Q86T75 865 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 MICU3Q86XE3 530 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 IQCA1Q86XH1 822 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 DGKHQ86XP1 1220 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 CEP95Q96GE4 821 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 UBAC1Q9BSL1 405 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 MKNK2Q9HBH9 465 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 VEZTQ9HBM0 779 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 HACL1Q9UJ83 578 aa12.18□□□□□ -0.46
TPM3-217ENST00000504663 SCAF8Q9UPN6 1271 aaKnown RBP12.18□□□□□ -0.46
TPM3-217ENST00000504663 GOLGA8AA7E2F4 631 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 POTECB2RU33 542 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 UBE2Q2LH0YL09 131 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 DDAH1O94760 285 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 TSPY3P0CV98 308 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 TSPY8P0CW00 308 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 ADD1P35611 737 aaKnown RBP12.17□□□□□ -0.46
TPM3-217ENST00000504663 METAP2P50579 478 aaKnown RBP eCLIP12.17□□□□□ -0.46
TPM3-217ENST00000504663 SART3Q15020 963 aaKnown RBP12.17□□□□□ -0.46
TPM3-217ENST00000504663 IFIT1BQ5T764 474 aaKnown RBP12.17□□□□□ -0.46
TPM3-217ENST00000504663 RBM26Q5T8P6 1007 aaKnown RBP12.17□□□□□ -0.46
TPM3-217ENST00000504663 SIAH1Q8IUQ4 282 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 FOXP4Q8IVH2 680 aaPredicted RBP12.17□□□□□ -0.46
TPM3-217ENST00000504663 SHISA4Q96DD7 197 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 CSRNP1Q96S65 589 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 TMEM47Q9BQJ4 181 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 MTMR4Q9NYA4 1195 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 TMOD2Q9NZR1 351 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 SMC3Q9UQE7 1217 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 MTMR6Q9Y217 621 aa12.17□□□□□ -0.46
TPM3-217ENST00000504663 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.17□□□□□ -0.46
TPM3-217ENST00000504663 CCDC69A6NI79 296 aa12.16□□□□□ -0.46
TPM3-217ENST00000504663 TBC1D12O60347 775 aa12.16□□□□□ -0.46
TPM3-217ENST00000504663 HSP90AA1P07900 732 aaKnown RBP12.16□□□□□ -0.46
TPM3-217ENST00000504663 SYT1P21579 422 aa12.16□□□□□ -0.46
TPM3-217ENST00000504663 RASA3Q14644 834 aa12.16□□□□□ -0.46
TPM3-217ENST00000504663 CCDC144CPQ8IYA2 1237 aa12.16□□□□□ -0.46
TPM3-217ENST00000504663 ZNF444Q8N0Y2 327 aaPredicted RBP12.16□□□□□ -0.46
TPM3-217ENST00000504663 TMTC2Q8N394 836 aa12.16□□□□□ -0.46
TPM3-217ENST00000504663 ZNF287Q9HBT7 754 aa12.16□□□□□ -0.46
TPM3-217ENST00000504663 HERC5Q9UII4 1024 aaKnown RBP12.16□□□□□ -0.46
TPM3-217ENST00000504663 SLC12A7Q9Y666 1083 aa12.16□□□□□ -0.46
TPM3-217ENST00000504663 CNTNAP5Q8WYK1 1306 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 STK36Q9NRP7 1315 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 PHF20L1A8MW92 1017 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 MYO1BO43795 1136 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 GRIN3BO60391 1043 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 PPFIA3O75145 1194 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 PLEKHA8P1O95397 391 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 SNHG28P0DPA3 235 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 IFNAR1P17181 557 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 GRM4Q14833 912 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 GPR162Q16538 588 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 RTN1Q16799 776 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 ANGEL2Q5VTE6 544 aaKnown RBP12.15□□□□□ -0.46
TPM3-217ENST00000504663 NFXL1Q6ZNB6 911 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 CLEC17AQ6ZS10 378 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 TMTC3Q6ZXV5 915 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 FANCBQ8NB91 859 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 TNPO1Q92973 898 aaKnown RBP12.15□□□□□ -0.46
TPM3-217ENST00000504663 ADARB2Q9NS39 739 aaKnown RBP12.15□□□□□ -0.46
TPM3-217ENST00000504663 GGA3Q9NZ52 723 aa12.15□□□□□ -0.46
TPM3-217ENST00000504663 PITPNM2Q9BZ72 1349 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 ERICH2A1L162 156 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 H7C1D1 291 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 GDF11O95390 407 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 CCDC178Q5BJE1 867 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 CDC37L1Q7L3B6 337 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 ZSCAN29Q8IWY8 852 aaPredicted RBP12.14□□□□□ -0.47
TPM3-217ENST00000504663 PNMA1Q8ND90 353 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 DDX11Q96FC9 970 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 CHAMP1Q96JM3 812 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 CCDC17Q96LX7 622 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 MAP3K14Q99558 947 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 MAD2L2Q9UI95 211 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 PARP14Q460N5 1801 aa12.14□□□□□ -0.47
TPM3-217ENST00000504663 GLTPD2A6NH11 291 aa12.13□□□□□ -0.47
TPM3-217ENST00000504663 STX6O43752 255 aa12.13□□□□□ -0.47
TPM3-217ENST00000504663 FMNL1O95466 1100 aaPredicted RBP12.13□□□□□ -0.47
TPM3-217ENST00000504663 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
TPM3-217ENST00000504663 NUCB2P80303 420 aa12.13□□□□□ -0.47
TPM3-217ENST00000504663 HMGN5P82970 282 aaKnown RBP12.13□□□□□ -0.47
TPM3-217ENST00000504663 SEPT2Q15019 361 aa12.13□□□□□ -0.47
TPM3-217ENST00000504663 CERKLQ49MI3 558 aaPredicted RBP12.13□□□□□ -0.47
TPM3-217ENST00000504663 CATIPQ7Z7H3 387 aa12.13□□□□□ -0.47
TPM3-217ENST00000504663 CMTR1Q8N1G2 835 aaKnown RBP12.13□□□□□ -0.47
TPM3-217ENST00000504663 STAG2Q8N3U4 1231 aa12.13□□□□□ -0.47
TPM3-217ENST00000504663 CRACR2BQ8N4Y2 399 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms