RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 PTH1RQ03431 593 aa18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 ZBTB16Q05516 673 aa18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 CHRNDQ07001 517 aa18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 MTX1Q13505 466 aa18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 ZBTB1Q9Y2K1 713 aa18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 CPSF1Q10570 1443 aaKnown RBP18.02■□□□□ 0.48
HMGXB3-202ENST00000503427 NCAPD2Q15021 1401 aa18.02■□□□□ 0.47
HMGXB3-202ENST00000503427 MXRA7P84157 204 aa18.02■□□□□ 0.47
HMGXB3-202ENST00000503427 KRBA2Q6ZNG9 492 aa18.02■□□□□ 0.47
HMGXB3-202ENST00000503427 B4GALNT4Q76KP1 1039 aa18.02■□□□□ 0.47
HMGXB3-202ENST00000503427 TEKT1Q969V4 418 aa18.02■□□□□ 0.47
HMGXB3-202ENST00000503427 GREM2Q9H772 168 aa18.02■□□□□ 0.47
HMGXB3-202ENST00000503427 SMIM23A6NLE4 172 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 C10orf67Q8IYJ2 551 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 TMOD4Q9NZQ9 345 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 HEG1Q9ULI3 1381 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 SLC9C1Q4G0N8 1177 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 NLGN1Q8N2Q7 840 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 ADGRL3Q9HAR2 1447 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 USP17L12C9JPN9 530 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 USP17L21D6R901 530 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 PFKFB2O60825 505 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 GYG1P46976 350 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 CCDC25Q86WR0 208 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 IFT20Q8IY31 132 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 NIM1KQ8IY84 436 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 MSANTD4Q8NCY6 345 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 TAB2Q9NYJ8 693 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 CEP83Q9Y592 693 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 ZNF654Q8IZM8 581 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 CCDC51Q96ER9 411 aa18.01■□□□□ 0.47
HMGXB3-202ENST00000503427 GTF2IP78347 998 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 NCBP1Q09161 790 aaKnown RBP18■□□□□ 0.47
HMGXB3-202ENST00000503427 USPL1Q5W0Q7 1092 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 BACH1O14867 736 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 SEMA3EO15041 775 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 PCP11498 1178 aaKnown RBP18■□□□□ 0.47
HMGXB3-202ENST00000503427 TXKP42681 527 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 BCAMP50895 628 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 GPT2Q8TD30 523 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 ZBTB9Q96C00 473 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 TPCN1Q9ULQ1 816 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 COMMD10Q9Y6G5 202 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 GLI2P10070 1586 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 DTNBO60941 627 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 ATP2A2P16615 1042 aaKnown RBP18■□□□□ 0.47
HMGXB3-202ENST00000503427 DLGAP5Q15398 846 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 ASIC2Q16515 512 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 KCNJ14Q9UNX9 436 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 ERVV-1B6SEH8 477 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 TNFAIP3P21580 790 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 IQCDQ96DY2 449 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 SMC6Q96SB8 1091 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 ALKQ9UM73 1620 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 NR1I2O75469 434 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 FCHSD1Q86WN1 690 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 CEP57Q86XR8 500 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 LRRC45Q96CN5 670 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 KCNK9Q9NPC2 374 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 LRWD1Q9UFC0 647 aa18■□□□□ 0.47
HMGXB3-202ENST00000503427 SPATA31A3Q5VYP0 1347 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 ACTN4O43707 911 aaKnown RBP17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 CALUO43852 315 aaPredicted RBP17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 PFKFB1P16118 471 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 ARID4AP29374 1257 aaPredicted RBP17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 PKP1Q13835 747 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 CCDC84Q86UT8 332 aaPredicted RBP17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 CCDC97Q96F63 343 aaPredicted RBP17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 DBNLQ9UJU6 430 aaKnown RBP17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 ATP5DP30049 168 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 MAGEA1P43355 309 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 NELFBQ8WX92 580 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 USP28Q96RU2 1077 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 BCL2L12Q9HB09 334 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 GOLGA6CA6NDK9 693 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 PPIP5K2O43314 1243 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 GOLGA6DP0CG33 693 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 SETDB1Q15047 1291 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 UTP14CQ5TAP6 766 aaKnown RBP17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 USP40Q9NVE5 1235 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 GOLGA6AQ9NYA3 693 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 ABCA9Q8IUA7 1624 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 DKC1O60832 514 aaKnown RBP eCLIP17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 MRFAP1L1Q96HT8 127 aa17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 THRAP3Q9Y2W1 955 aaKnown RBP17.99■□□□□ 0.47
HMGXB3-202ENST00000503427 TSKSQ9UJT2 592 aa17.98■□□□□ 0.47
HMGXB3-202ENST00000503427 CROCC2H7BZ55 1655 aa17.98■□□□□ 0.47
HMGXB3-202ENST00000503427 PNOCQ13519 176 aa17.98■□□□□ 0.47
HMGXB3-202ENST00000503427 KIFAP3Q92845 792 aa17.98■□□□□ 0.47
HMGXB3-202ENST00000503427 SERTAD1Q9UHV2 236 aa17.98■□□□□ 0.47
HMGXB3-202ENST00000503427 ATP10DQ9P241 1426 aa17.98■□□□□ 0.47
HMGXB3-202ENST00000503427 NDUFAB1O14561 156 aa17.98■□□□□ 0.47
HMGXB3-202ENST00000503427 ZSCAN10Q96SZ4 725 aaPredicted RBP17.98■□□□□ 0.47
HMGXB3-202ENST00000503427 SEC62Q99442 399 aaKnown RBP17.98■□□□□ 0.47
HMGXB3-202ENST00000503427 FGAP02671 866 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 TMC4Q7Z404 712 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 MAP4K1Q92918 833 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 NKIRAS1Q9NYS0 192 aa17.97■□□□□ 0.47
HMGXB3-202ENST00000503427 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms