RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 C19orf81C9J6K1 198 aa13.04□□□□□ -0.32
SNCA-207ENST00000502987 SGPL1O95470 568 aa13.04□□□□□ -0.32
SNCA-207ENST00000502987 CHRM1P11229 460 aaPredicted RBP13.04□□□□□ -0.32
SNCA-207ENST00000502987 IRF5Q13568 498 aa13.04□□□□□ -0.32
SNCA-207ENST00000502987 P2RX7Q99572 595 aaKnown RBP13.04□□□□□ -0.32
SNCA-207ENST00000502987 ANTXR1Q9H6X2 564 aa13.04□□□□□ -0.32
SNCA-207ENST00000502987 CWC22Q9HCG8 908 aaKnown RBP13.04□□□□□ -0.32
SNCA-207ENST00000502987 GINM1Q9NU53 330 aa13.04□□□□□ -0.32
SNCA-207ENST00000502987 ZBTB21Q9ULJ3 1066 aa13.04□□□□□ -0.32
SNCA-207ENST00000502987 HMMRO75330 724 aa13.03□□□□□ -0.32
SNCA-207ENST00000502987 FARP2O94887 1054 aaPredicted RBP13.03□□□□□ -0.32
SNCA-207ENST00000502987 GH2P01242 217 aa13.03□□□□□ -0.32
SNCA-207ENST00000502987 POLR3DP05423 398 aaPredicted RBP13.03□□□□□ -0.32
SNCA-207ENST00000502987 IFIT2P09913 472 aaKnown RBP13.03□□□□□ -0.32
SNCA-207ENST00000502987 JAG1P78504 1218 aa13.03□□□□□ -0.32
SNCA-207ENST00000502987 TTF1Q15361 905 aaPredicted RBP13.03□□□□□ -0.32
SNCA-207ENST00000502987 ZYXQ15942 572 aaKnown RBP13.03□□□□□ -0.32
SNCA-207ENST00000502987 SHROOM1Q2M3G4 852 aaPredicted RBP13.03□□□□□ -0.32
SNCA-207ENST00000502987 TTC6Q86TZ1 520 aa13.03□□□□□ -0.32
SNCA-207ENST00000502987 CLASRPQ8N2M8 674 aaKnown RBP13.03□□□□□ -0.32
SNCA-207ENST00000502987 RHPN1Q8TCX5 695 aa13.03□□□□□ -0.32
SNCA-207ENST00000502987 FEZ1Q99689 392 aa13.03□□□□□ -0.32
SNCA-207ENST00000502987 DNAJC18Q9H819 358 aa13.03□□□□□ -0.32
SNCA-207ENST00000502987 MAGEB6P1A0A0J9YX57 407 aa13.02□□□□□ -0.33
SNCA-207ENST00000502987 PSEN1P49768 467 aa13.02□□□□□ -0.33
SNCA-207ENST00000502987 RAB3GAP1Q15042 981 aa13.02□□□□□ -0.33
SNCA-207ENST00000502987 CERKLQ49MI3 558 aaPredicted RBP13.02□□□□□ -0.33
SNCA-207ENST00000502987 USP17L2Q6R6M4 530 aa13.02□□□□□ -0.33
SNCA-207ENST00000502987 METTL16Q86W50 562 aaKnown RBP13.02□□□□□ -0.33
SNCA-207ENST00000502987 GPRC5AQ8NFJ5 357 aa13.02□□□□□ -0.33
SNCA-207ENST00000502987 KIF1BPQ96EK5 621 aa13.02□□□□□ -0.33
SNCA-207ENST00000502987 DNAJC2Q99543 621 aaKnown RBP13.02□□□□□ -0.33
SNCA-207ENST00000502987 PAGR1Q9BTK6 254 aa13.02□□□□□ -0.33
SNCA-207ENST00000502987 CABP5Q9NP86 173 aa13.02□□□□□ -0.33
SNCA-207ENST00000502987 SERPINB13Q9UIV8 391 aa13.02□□□□□ -0.33
SNCA-207ENST00000502987 COG6Q9Y2V7 657 aa13.02□□□□□ -0.33
SNCA-207ENST00000502987 NR2E3Q9Y5X4 410 aa13.02□□□□□ -0.33
SNCA-207ENST00000502987 PEX10O60683 326 aa13.01□□□□□ -0.33
SNCA-207ENST00000502987 CYP2B6P20813 491 aa13.01□□□□□ -0.33
SNCA-207ENST00000502987 HOXA7P31268 230 aaPredicted RBP13.01□□□□□ -0.33
SNCA-207ENST00000502987 HERVK_113P62684 666 aa13.01□□□□□ -0.33
SNCA-207ENST00000502987 SLC9C2Q5TAH2 1124 aa13.01□□□□□ -0.33
SNCA-207ENST00000502987 RPAP2Q8IXW5 612 aaPredicted RBP13.01□□□□□ -0.33
SNCA-207ENST00000502987 DDX19BQ9UMR2 479 aa13.01□□□□□ -0.33
SNCA-207ENST00000502987 GOLIM4O00461 696 aa13□□□□□ -0.33
SNCA-207ENST00000502987 HMGCRP04035 888 aa13□□□□□ -0.33
SNCA-207ENST00000502987 PDE3AQ14432 1141 aa13□□□□□ -0.33
SNCA-207ENST00000502987 ABCB5Q2M3G0 1257 aa13□□□□□ -0.33
SNCA-207ENST00000502987 TMED8Q6PL24 325 aaPredicted RBP13□□□□□ -0.33
SNCA-207ENST00000502987 NUDT12Q9BQG2 462 aa13□□□□□ -0.33
SNCA-207ENST00000502987 CRNKL1Q9BZJ0 848 aaKnown RBP13□□□□□ -0.33
SNCA-207ENST00000502987 XRN2Q9H0D6 950 aaKnown RBP eCLIP13□□□□□ -0.33
SNCA-207ENST00000502987 CHMP4BQ9H444 224 aaKnown RBP13□□□□□ -0.33
SNCA-207ENST00000502987 HMX1Q9NP08 348 aaPredicted RBP13□□□□□ -0.33
SNCA-207ENST00000502987 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
SNCA-207ENST00000502987 MORF4L1Q9UBU8 362 aa13□□□□□ -0.33
SNCA-207ENST00000502987 MPHOSPH10O00566 681 aaKnown RBP12.99□□□□□ -0.33
SNCA-207ENST00000502987 EVI5O60447 810 aa12.99□□□□□ -0.33
SNCA-207ENST00000502987 CAPN2P17655 700 aa12.99□□□□□ -0.33
SNCA-207ENST00000502987 MAPK4P31152 587 aa12.99□□□□□ -0.33
SNCA-207ENST00000502987 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
SNCA-207ENST00000502987 TATDN1Q6P1N9 297 aa12.99□□□□□ -0.33
SNCA-207ENST00000502987 PAWRQ96IZ0 340 aaKnown RBP12.99□□□□□ -0.33
SNCA-207ENST00000502987 MCM9Q9NXL9 1143 aa12.99□□□□□ -0.33
SNCA-207ENST00000502987 GJD2Q9UKL4 321 aa12.99□□□□□ -0.33
SNCA-207ENST00000502987 RPTORQ8N122 1335 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 ZNF532Q9HCE3 1301 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 USP17L15C9J2P7 530 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 USP17L13C9JLJ4 530 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 USP17L11C9JVI0 530 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 USP17L18D6R9N7 530 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 USP17L22D6RA61 530 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 USP17L17D6RBQ6 530 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 USP17L19D6RCP7 530 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 USP17L20D6RJB6 530 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 RAB11FIP3O75154 756 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 PDE6AP16499 860 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 PLCD1P51178 756 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 USP14P54578 494 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 ERVK-9P63128 1117 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 ERVK-24P63145 666 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 USP17L24Q0WX57 530 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 TRIM32Q13049 653 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 NECAB2Q7Z6G3 386 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 IFNLR1Q8IU57 520 aaPredicted RBP12.98□□□□□ -0.33
SNCA-207ENST00000502987 GTF3C2Q8WUA4 911 aaPredicted RBP12.98□□□□□ -0.33
SNCA-207ENST00000502987 EHD4Q9H223 541 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 TXNRD2Q9NNW7 524 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 PAK6Q9NQU5 681 aaPredicted RBP12.98□□□□□ -0.33
SNCA-207ENST00000502987 RBPJLQ9UBG7 517 aa12.98□□□□□ -0.33
SNCA-207ENST00000502987 NAV1Q8NEY1 1877 aa12.97□□□□□ -0.33
SNCA-207ENST00000502987 GLRX3O76003 335 aaKnown RBP12.97□□□□□ -0.33
SNCA-207ENST00000502987 FXR1P51114 621 aaKnown RBP eCLIP12.97□□□□□ -0.33
SNCA-207ENST00000502987 Q3C1V9 767 aa12.97□□□□□ -0.33
SNCA-207ENST00000502987 PLEKHH3Q7Z736 793 aa12.97□□□□□ -0.33
SNCA-207ENST00000502987 UBE2Q1Q7Z7E8 422 aa12.97□□□□□ -0.33
SNCA-207ENST00000502987 ACER1Q8TDN7 264 aa12.97□□□□□ -0.33
SNCA-207ENST00000502987 SOCS4Q8WXH5 440 aa12.97□□□□□ -0.33
SNCA-207ENST00000502987 RIOK1Q9BRS2 568 aaKnown RBP12.97□□□□□ -0.33
SNCA-207ENST00000502987 BOLA2Q9H3K6 86 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms