RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CTNNA3Q9UI47 895 aa12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.77□□□□□ -0.37
UBE2D3-212ENST00000502563 LAMA4Q16363 1823 aa12.76□□□□□ -0.37
UBE2D3-212ENST00000502563 EPB41L2O43491 1005 aaKnown RBP12.76□□□□□ -0.37
UBE2D3-212ENST00000502563 RASA1P20936 1047 aa12.76□□□□□ -0.37
UBE2D3-212ENST00000502563 HOXA7P31268 230 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-212ENST00000502563 GUCY1A2P33402 732 aa12.76□□□□□ -0.37
UBE2D3-212ENST00000502563 PABPC4Q13310 644 aaKnown RBP eCLIP12.76□□□□□ -0.374e-7■■■■□ 24.1
UBE2D3-212ENST00000502563 RNF41Q9H4P4 317 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-212ENST00000502563 SH2D4AQ9H788 454 aa12.76□□□□□ -0.37
UBE2D3-212ENST00000502563 AGTPBP1Q9UPW5 1226 aa12.76□□□□□ -0.37
UBE2D3-212ENST00000502563 CYP2D7A0A087X1C5 515 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 IGKV6D-41A0A0C4DH26 115 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 BTBD19C9JJ37 291 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 FOXN1O15353 648 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 GDF11O95390 407 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 HSPA8P11142 646 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 PRKAR2AP13861 404 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 NOVP48745 357 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 JAG1P78504 1218 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 SPP2Q13103 211 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 GPAT2Q6NUI2 795 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 SLC44A5Q8NCS7 719 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 STAG1Q8WVM7 1258 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 LPAR1Q92633 364 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 DYNLL2Q96FJ2 89 aa12.75□□□□□ -0.37
UBE2D3-212ENST00000502563 ADGRA2Q96PE1 1338 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 TRIM75PA6NK02 468 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 MINDY4BA8MYZ0 360 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 TLR2O60603 784 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 MKRN3Q13064 507 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 SLC4A8Q2Y0W8 1093 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 USP17L2Q6R6M4 530 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 CASC1Q6TDU7 716 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 ZNF444Q8N0Y2 327 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 FAM43AQ8N2R8 423 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 NEDD1Q8NHV4 660 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 GTF3C2Q8WUA4 911 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 MAP4K1Q92918 833 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 MKL1Q969V6 931 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 PARK7Q99497 189 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 IL25Q9H293 177 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 MKNK2Q9HBH9 465 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 ZFYVE28Q9HCC9 887 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 TCP11L1Q9NUJ3 509 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 NYAP2Q9P242 653 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 PNMA3Q9UL41 463 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 TMX2Q9Y320 296 aa12.74□□□□□ -0.37
UBE2D3-212ENST00000502563 CDC45O75419 566 aa12.73□□□□□ -0.37
UBE2D3-212ENST00000502563 TRPA1O75762 1119 aa12.73□□□□□ -0.37
UBE2D3-212ENST00000502563 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
UBE2D3-212ENST00000502563 AKR1B1P15121 316 aa12.73□□□□□ -0.37
UBE2D3-212ENST00000502563 ICA1Q05084 483 aa12.73□□□□□ -0.37
UBE2D3-212ENST00000502563 SEPT2Q15019 361 aa12.73□□□□□ -0.37
UBE2D3-212ENST00000502563 IMMTQ16891 758 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-212ENST00000502563 AKNAD1Q5T1N1 836 aa12.73□□□□□ -0.37
UBE2D3-212ENST00000502563 LBX2Q6XYB7 198 aa12.73□□□□□ -0.37
UBE2D3-212ENST00000502563 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.73□□□□□ -0.37
UBE2D3-212ENST00000502563 ARHGEF10LQ9HCE6 1279 aa12.73□□□□□ -0.37
UBE2D3-212ENST00000502563 MYPNQ86TC9 1320 aa12.72□□□□□ -0.37
UBE2D3-212ENST00000502563 SMIM22K7EJ46 135 aa12.72□□□□□ -0.37
UBE2D3-212ENST00000502563 PDHXO00330 501 aa12.72□□□□□ -0.37
UBE2D3-212ENST00000502563 ZNF213O14771 459 aa12.72□□□□□ -0.37
UBE2D3-212ENST00000502563 MTMR2Q13614 643 aa12.72□□□□□ -0.37
UBE2D3-212ENST00000502563 RAB3GAP1Q15042 981 aa12.72□□□□□ -0.37
UBE2D3-212ENST00000502563 TAF1CQ15572 869 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-212ENST00000502563 SIAH1Q8IUQ4 282 aa12.72□□□□□ -0.37
UBE2D3-212ENST00000502563 ESYT1Q9BSJ8 1104 aa12.72□□□□□ -0.37
UBE2D3-212ENST00000502563 TMOD4Q9NZQ9 345 aa12.72□□□□□ -0.37
UBE2D3-212ENST00000502563 GPR25O00155 361 aa12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 GCLCP48506 637 aaPredicted RBP12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 HMGCS2P54868 508 aa12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 CRHR2Q13324 411 aa12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 SHROOM1Q2M3G4 852 aaPredicted RBP12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 CCDC178Q5BJE1 867 aa12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 C17orf99Q6UX52 265 aa12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 MFSD6Q6ZSS7 791 aa12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 VCPKMTQ9H867 229 aa12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 CNNM2Q9H8M5 875 aa12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 EMILIN3Q9NT22 766 aa12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 MTMR4Q9NYA4 1195 aa12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.71□□□□□ -0.37
UBE2D3-212ENST00000502563 A0A1W2PRG0 241 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 MPHOSPH10O00566 681 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 EIF5BO60841 1220 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 TTLL1O95922 423 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 GNRH1P01148 92 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 TSPY3P0CV98 308 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 TSPY8P0CW00 308 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 KIAA1211Q6ZU35 1233 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 GMCL1P1Q8NEA9 526 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 ESR2Q92731 530 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 TTC14Q96N46 770 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 FEZ1Q99689 392 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 MTA3Q9BTC8 594 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 LSG1Q9H089 658 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 NBPF3Q9H094 633 aa12.7□□□□□ -0.38
UBE2D3-212ENST00000502563 TSPY2A6NKD2 308 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 USP17L15C9J2P7 530 aa12.69□□□□□ -0.38
UBE2D3-212ENST00000502563 USP17L13C9JLJ4 530 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms