RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 TMEM201Q5SNT2 666 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 ZNF746Q6NUN9 644 aaPredicted RBP4.22□□□□□ -1.73
SMAD1-203ENST00000502342 USP48Q86UV5 1035 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 WFDC3Q8IUB2 231 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 PHACTR4Q8IZ21 702 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 PPP1R13LQ8WUF5 828 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 UBE2FQ969M7 185 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 MISP3Q96FF7 219 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 TNKS2Q9H2K2 1166 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 ANTXR1Q9H6X2 564 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 ATP13A1Q9HD20 1204 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 SNX11Q9Y5W9 270 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 ROBO2Q9HCK4 1378 aa4.22□□□□□ -1.73
SMAD1-203ENST00000502342 SLC22A31A6NKX4 558 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 RACK1P63244 317 aaKnown RBP4.21□□□□□ -1.74
SMAD1-203ENST00000502342 ZP2Q05996 745 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 TNK2Q07912 1038 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 APOBRQ0VD83 1088 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 IKZF1Q13422 519 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 ZNF792Q3KQV3 632 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 MFSD4AQ8N468 514 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 AGBL5Q8NDL9 886 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 DNAJB8Q8NHS0 232 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 ZNF428Q96B54 188 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 KIAA1522Q9P206 1035 aaPredicted RBP4.21□□□□□ -1.74
SMAD1-203ENST00000502342 MAPK8IP1Q9UQF2 711 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 CAPN6Q9Y6Q1 641 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 PRR36Q9H6K5 1346 aa4.21□□□□□ -1.74
SMAD1-203ENST00000502342 RECKO95980 971 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 RNASE1P07998 156 aaKnown RBP4.2□□□□□ -1.74
SMAD1-203ENST00000502342 ETV3P41162 512 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 FBXW10Q5XX13 1052 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 KIAA0825Q8IV33 1275 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 CYB5D2Q8WUJ1 264 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 ASB11Q8WXH4 323 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 CCDC74BQ96LY2 380 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 Q96M66 194 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 NT5C1AQ9BXI3 368 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 KCNQ5Q9NR82 932 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 SEMA3GQ9NS98 782 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 MBNL3Q9NUK0 354 aaKnown RBP4.2□□□□□ -1.74
SMAD1-203ENST00000502342 ADAMTS6Q9UKP5 1117 aa4.2□□□□□ -1.74
SMAD1-203ENST00000502342 COL17A1Q9UMD9 1497 aaPredicted RBP4.19□□□□□ -1.74
SMAD1-203ENST00000502342 FAM86C2PA6NEL3 165 aa4.19□□□□□ -1.74
SMAD1-203ENST00000502342 SCAMP3O14828 347 aaKnown RBP4.19□□□□□ -1.74
SMAD1-203ENST00000502342 ZNF865P0CJ78 1059 aaPredicted RBP4.19□□□□□ -1.74
SMAD1-203ENST00000502342 RAG1P15918 1043 aa4.19□□□□□ -1.74
SMAD1-203ENST00000502342 FUT4P22083 530 aa4.19□□□□□ -1.74
SMAD1-203ENST00000502342 POLR2BP30876 1174 aaKnown RBP4.19□□□□□ -1.74
SMAD1-203ENST00000502342 ZNF165P49910 485 aa4.19□□□□□ -1.74
SMAD1-203ENST00000502342 ANGEL2Q5VTE6 544 aaKnown RBP4.19□□□□□ -1.74
SMAD1-203ENST00000502342 MCTP1Q6DN14 999 aa4.19□□□□□ -1.74
SMAD1-203ENST00000502342 CARS2Q9HA77 564 aaKnown RBP4.19□□□□□ -1.74
SMAD1-203ENST00000502342 METTL5Q9NRN9 209 aaKnown RBP4.19□□□□□ -1.74
SMAD1-203ENST00000502342 DDX41Q9UJV9 622 aaKnown RBP4.19□□□□□ -1.74
SMAD1-203ENST00000502342 ST14Q9Y5Y6 855 aa4.19□□□□□ -1.74
SMAD1-203ENST00000502342 PITPNM2Q9BZ72 1349 aa4.19□□□□□ -1.74
SMAD1-203ENST00000502342 ATE1O95260 518 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 TPP2P29144 1249 aaPredicted RBP4.18□□□□□ -1.74
SMAD1-203ENST00000502342 CLCN7P51798 805 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 HDLBPQ00341 1268 aaKnown RBP4.18□□□□□ -1.74
SMAD1-203ENST00000502342 NT5DC4Q86YG4 428 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 CREG2Q8IUH2 290 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 SLITRK4Q8IW52 837 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 SLFN12Q8IYM2 578 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 ZNF654Q8IZM8 581 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 LRRN4CLQ8ND94 238 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 ATG4CQ96DT6 458 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 COX4I2Q96KJ9 171 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 ZNF512BQ96KM6 892 aaPredicted RBP4.18□□□□□ -1.74
SMAD1-203ENST00000502342 KREMEN1Q96MU8 473 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 DUSP15Q9H1R2 295 aaPredicted RBP4.18□□□□□ -1.74
SMAD1-203ENST00000502342 EHMT1Q9H9B1 1298 aa4.18□□□□□ -1.74
SMAD1-203ENST00000502342 RC3H2Q9HBD1 1191 aaKnown RBP4.18□□□□□ -1.74
SMAD1-203ENST00000502342 RGS13O14921 159 aa4.17□□□□□ -1.74
SMAD1-203ENST00000502342 UBOX5O94941 541 aa4.17□□□□□ -1.74
SMAD1-203ENST00000502342 VAMP1P23763 118 aa4.17□□□□□ -1.74
SMAD1-203ENST00000502342 KIR3DL1P43629 444 aa4.17□□□□□ -1.74
SMAD1-203ENST00000502342 PAK2Q13177 524 aa4.17□□□□□ -1.74
SMAD1-203ENST00000502342 OVOS1Q6IE37 1185 aa4.17□□□□□ -1.74
SMAD1-203ENST00000502342 CBLL1Q75N03 491 aa4.17□□□□□ -1.74
SMAD1-203ENST00000502342 METTL16Q86W50 562 aaKnown RBP4.17□□□□□ -1.74
SMAD1-203ENST00000502342 LRRC3Q9BY71 257 aa4.17□□□□□ -1.74
SMAD1-203ENST00000502342 KCNH3Q9ULD8 1083 aa4.17□□□□□ -1.74
SMAD1-203ENST00000502342 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.17□□□□□ -1.74
SMAD1-203ENST00000502342 ESR1P03372 595 aa4.16□□□□□ -1.74
SMAD1-203ENST00000502342 SLC23A3Q6PIS1 610 aa4.16□□□□□ -1.74
SMAD1-203ENST00000502342 RUFY4Q6ZNE9 571 aa4.16□□□□□ -1.74
SMAD1-203ENST00000502342 C22orf34Q6ZV56 151 aa4.16□□□□□ -1.74
SMAD1-203ENST00000502342 REXO1Q8N1G1 1221 aaKnown RBP4.16□□□□□ -1.74
SMAD1-203ENST00000502342 DTWD2Q8NBA8 298 aa4.16□□□□□ -1.74
SMAD1-203ENST00000502342 RNF141Q8WVD5 230 aa4.16□□□□□ -1.74
SMAD1-203ENST00000502342 FERD3LQ96RJ6 166 aa4.16□□□□□ -1.74
SMAD1-203ENST00000502342 CNNM2Q9H8M5 875 aa4.16□□□□□ -1.74
SMAD1-203ENST00000502342 GINM1Q9NU53 330 aa4.16□□□□□ -1.74
SMAD1-203ENST00000502342 GMIPQ9P107 970 aa4.16□□□□□ -1.74
SMAD1-203ENST00000502342 PPT2Q9UMR5 302 aa4.16□□□□□ -1.74
SMAD1-203ENST00000502342 SHISA3A0PJX4 238 aa4.15□□□□□ -1.75
SMAD1-203ENST00000502342 NME1P15531 152 aaKnown RBP4.15□□□□□ -1.75
SMAD1-203ENST00000502342 RBM25P49756 843 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms