RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 BTBD18B2RXH4 712 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 FOXN1O15353 648 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 ARHGAP6O43182 974 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 RFC4P35249 363 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 RTN1Q16799 776 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 PCDHA5Q9Y5H7 936 aa18.73■□□□□ 0.59
COL6A1-206ENST00000498614 RREB1Q92766 1687 aa18.72■□□□□ 0.59
COL6A1-206ENST00000498614 MINDY4BA8MYZ0 360 aa18.72■□□□□ 0.59
COL6A1-206ENST00000498614 SMIM22K7EJ46 135 aa18.72■□□□□ 0.59
COL6A1-206ENST00000498614 ZPR1O75312 459 aa18.72■□□□□ 0.59
COL6A1-206ENST00000498614 SASH3O75995 380 aa18.72■□□□□ 0.59
COL6A1-206ENST00000498614 GYG1P46976 350 aa18.72■□□□□ 0.59
COL6A1-206ENST00000498614 IRX5P78411 483 aaPredicted RBP18.72■□□□□ 0.59
COL6A1-206ENST00000498614 SART3Q15020 963 aaKnown RBP18.72■□□□□ 0.59
COL6A1-206ENST00000498614 RTL9Q8NET4 1388 aa18.72■□□□□ 0.59
COL6A1-206ENST00000498614 ERICH2A1L162 156 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 TBX2Q13207 712 aaPredicted RBP18.71■□□□□ 0.59
COL6A1-206ENST00000498614 TBC1D9BQ66K14 1250 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 KRBA2Q6ZNG9 492 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 NUP133Q8WUM0 1156 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 LAMB2P55268 1798 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 TAF1P21675 1872 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 HNRNPH2P55795 449 aaKnown RBP18.71■□□□□ 0.59
COL6A1-206ENST00000498614 GNG11P61952 73 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 PPARAQ07869 468 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 SPECC1Q5M775 1068 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 TOGARAM2Q6ZUX3 1019 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 C3orf67Q6ZVT6 689 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 NOSTRINQ8IVI9 506 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 DIS3L2Q8IYB7 885 aaKnown RBP18.71■□□□□ 0.59
COL6A1-206ENST00000498614 PDILTQ8N807 584 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 CNNM3Q8NE01 707 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 BAG1Q99933 345 aaPredicted RBP18.71■□□□□ 0.59
COL6A1-206ENST00000498614 TFCP2L1Q9NZI6 479 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 RAI14Q9P0K7 980 aa18.71■□□□□ 0.59
COL6A1-206ENST00000498614 TBC1D8O95759 1140 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 MMP1P03956 469 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 TPM1P09493 284 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 CASQ1P31415 396 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 MAP3K9P80192 1104 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 TRIM22Q8IYM9 498 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 CCDC24Q8N4L8 307 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 WASF1Q92558 559 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 UBXN6Q9BZV1 441 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 NARFQ9UHQ1 456 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 KCNH3Q9ULD8 1083 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 SRCAPQ6ZRS2 3230 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 CUTAO60888 179 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 ERFEQ4G0M1 354 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 CC2D1AQ6P1N0 951 aaPredicted RBP18.7■□□□□ 0.58
COL6A1-206ENST00000498614 CDC5LQ99459 802 aaKnown RBP18.7■□□□□ 0.58
COL6A1-206ENST00000498614 NID2Q14112 1375 aa18.7■□□□□ 0.58
COL6A1-206ENST00000498614 MYO1BO43795 1136 aa18.69■□□□□ 0.58
COL6A1-206ENST00000498614 SAFBQ15424 915 aaKnown RBP eCLIP18.69■□□□□ 0.58
COL6A1-206ENST00000498614 ZNF654Q8IZM8 581 aa18.69■□□□□ 0.58
COL6A1-206ENST00000498614 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.69■□□□□ 0.58
COL6A1-206ENST00000498614 MAGEB6P1A0A0J9YX57 407 aa18.69■□□□□ 0.58
COL6A1-206ENST00000498614 TOB1P50616 345 aaPredicted RBP18.69■□□□□ 0.58
COL6A1-206ENST00000498614 ADKP55263 362 aaKnown RBP18.69■□□□□ 0.58
COL6A1-206ENST00000498614 PPP2R3AQ06190 1150 aa18.69■□□□□ 0.58
COL6A1-206ENST00000498614 TEX35Q5T0J7 233 aa18.69■□□□□ 0.58
COL6A1-206ENST00000498614 TC2NQ8N9U0 490 aa18.69■□□□□ 0.58
COL6A1-206ENST00000498614 NEK11Q8NG66 645 aa18.69■□□□□ 0.58
COL6A1-206ENST00000498614 UBAC1Q9BSL1 405 aa18.69■□□□□ 0.58
COL6A1-206ENST00000498614 RNF41Q9H4P4 317 aaPredicted RBP18.69■□□□□ 0.58
COL6A1-206ENST00000498614 ZCCHC17Q9NP64 241 aaKnown RBP18.69■□□□□ 0.58
COL6A1-206ENST00000498614 MRFAP1Q9Y605 127 aa18.69■□□□□ 0.58
COL6A1-206ENST00000498614 TNS1Q9HBL0 1735 aaKnown RBP18.69■□□□□ 0.58
COL6A1-206ENST00000498614 COL1A1P02452 1464 aaPredicted RBP18.68■□□□□ 0.58
COL6A1-206ENST00000498614 ATP8B1O43520 1251 aa18.68■□□□□ 0.58
COL6A1-206ENST00000498614 ST5P78524 1137 aa18.68■□□□□ 0.58
COL6A1-206ENST00000498614 MDM2Q00987 491 aaPredicted RBP18.68■□□□□ 0.58
COL6A1-206ENST00000498614 FMR1Q06787 632 aaKnown RBP eCLIP18.68■□□□□ 0.58
COL6A1-206ENST00000498614 NR5A1Q13285 461 aa18.68■□□□□ 0.58
COL6A1-206ENST00000498614 ANKRD18AQ8IVF6 992 aa18.68■□□□□ 0.58
COL6A1-206ENST00000498614 CRACR2BQ8N4Y2 399 aaPredicted RBP18.68■□□□□ 0.58
COL6A1-206ENST00000498614 KIFC2Q96AC6 838 aa18.68■□□□□ 0.58
COL6A1-206ENST00000498614 CAMKK2Q96RR4 588 aa18.68■□□□□ 0.58
COL6A1-206ENST00000498614 ZNF652Q9Y2D9 606 aa18.68■□□□□ 0.58
COL6A1-206ENST00000498614 GTF2E1P29083 439 aaPredicted RBP18.68■□□□□ 0.58
COL6A1-206ENST00000498614 GRIN1Q05586 938 aa18.68■□□□□ 0.58
COL6A1-206ENST00000498614 GPR161Q8N6U8 529 aaKnown RBP18.68■□□□□ 0.58
COL6A1-206ENST00000498614 KRI1Q8N9T8 703 aaKnown RBP18.68■□□□□ 0.58
COL6A1-206ENST00000498614 FANCBQ8NB91 859 aa18.68■□□□□ 0.58
COL6A1-206ENST00000498614 MAN1B1Q9UKM7 699 aa18.68■□□□□ 0.58
COL6A1-206ENST00000498614 DEXIO95424 95 aa18.67■□□□□ 0.58
COL6A1-206ENST00000498614 OAS2P29728 719 aaKnown RBP18.67■□□□□ 0.58
COL6A1-206ENST00000498614 SF3B2Q13435 895 aaKnown RBP18.67■□□□□ 0.58
COL6A1-206ENST00000498614 RSRC2Q7L4I2 434 aaKnown RBP18.67■□□□□ 0.58
COL6A1-206ENST00000498614 BBXQ8WY36 941 aaPredicted RBP18.67■□□□□ 0.58
COL6A1-206ENST00000498614 CCDC34Q96HJ3 373 aa18.67■□□□□ 0.58
COL6A1-206ENST00000498614 DESI2Q9BSY9 194 aa18.67■□□□□ 0.58
COL6A1-206ENST00000498614 ZNF804BA4D1E1 1349 aa18.67■□□□□ 0.58
COL6A1-206ENST00000498614 TNKSO95271 1327 aa18.67■□□□□ 0.58
COL6A1-206ENST00000498614 CYP2D7A0A087X1C5 515 aa18.67■□□□□ 0.58
COL6A1-206ENST00000498614 STX10O60499 249 aa18.67■□□□□ 0.58
COL6A1-206ENST00000498614 ATP2B1P20020 1258 aa18.67■□□□□ 0.58
COL6A1-206ENST00000498614 DYNLL1P63167 89 aaKnown RBP18.67■□□□□ 0.58
COL6A1-206ENST00000498614 GOLGA6L9A6NEM1 432 aa18.66■□□□□ 0.58
COL6A1-206ENST00000498614 PRR29P0C7W0 189 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms