RNA–Protein interactions for RNA: ENST00000498497.2

PBX1-211, Transcript of PBX homeobox 1, humanhuman

TSL 3

Gene PBX1, Length 3,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-211ENST00000498497 PALB2Q86YC2 1186 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 CCDC63Q8NA47 563 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 ATL2Q8NHH9 583 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 RBM41Q96IZ5 413 aaKnown RBP13.02□□□□□ -0.33
PBX1-211ENST00000498497 SH3GL2Q99962 352 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.33
PBX1-211ENST00000498497 PTPRTO14522 1441 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 ABCC10Q5T3U5 1492 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 MAGI1Q96QZ7 1491 aaPredicted RBP13.01□□□□□ -0.33
PBX1-211ENST00000498497 GPATCH8Q9UKJ3 1502 aaKnown RBP13.01□□□□□ -0.33
PBX1-211ENST00000498497 SMIM23A6NLE4 172 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 B4DLN1 442 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 H0Y3Z8 333 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 ADAMTS2O95450 1211 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 UBTFL1P0CB47 393 aaPredicted RBP13.01□□□□□ -0.33
PBX1-211ENST00000498497 FXR1P51114 621 aaKnown RBP eCLIP13.01□□□□□ -0.33
PBX1-211ENST00000498497 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
PBX1-211ENST00000498497 FILIP1LQ4L180 1135 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 CFAP58Q5T655 872 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 ZNF589Q86UQ0 364 aaPredicted RBP13.01□□□□□ -0.33
PBX1-211ENST00000498497 FCHSD1Q86WN1 690 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 TMX4Q9H1E5 349 aaPredicted RBP13.01□□□□□ -0.33
PBX1-211ENST00000498497 DNAAF2Q9NVR5 837 aaKnown RBP13.01□□□□□ -0.33
PBX1-211ENST00000498497 SAR1BQ9Y6B6 198 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 DUSP10Q9Y6W6 482 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 SALL3Q9BXA9 1300 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 UHRF1BP1LA0JNW5 1464 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 FAM170AA1A519 330 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 SESN3P58005 492 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 MPP3Q13368 585 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 PTPROQ16827 1216 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 CHP1Q99653 195 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 VIPAS39Q9H9C1 493 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 GPHNQ9NQX3 736 aaPredicted RBP13.01□□□□□ -0.33
PBX1-211ENST00000498497 ZFATQ9P243 1243 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 MROH7-TTC4A0A0A0MT08 1334 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 KDRP35968 1356 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 PIK3R4Q99570 1358 aa13.01□□□□□ -0.33
PBX1-211ENST00000498497 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13□□□□□ -0.33
PBX1-211ENST00000498497 DEUP1Q05D60 604 aa13□□□□□ -0.33
PBX1-211ENST00000498497 CUL3Q13618 768 aa13□□□□□ -0.33
PBX1-211ENST00000498497 CCDC122Q5T0U0 273 aa13□□□□□ -0.33
PBX1-211ENST00000498497 ABTB1Q969K4 478 aaPredicted RBP13□□□□□ -0.33
PBX1-211ENST00000498497 GORASP1Q9BQQ3 440 aa13□□□□□ -0.33
PBX1-211ENST00000498497 PREBQ9HCU5 417 aa13□□□□□ -0.33
PBX1-211ENST00000498497 CD2APQ9Y5K6 639 aa13□□□□□ -0.33
PBX1-211ENST00000498497 ADGBQ8N7X0 1667 aa13□□□□□ -0.33
PBX1-211ENST00000498497 MINK1Q8N4C8 1332 aaPredicted RBP13□□□□□ -0.33
PBX1-211ENST00000498497 GOLGA8KD6RF30 607 aa13□□□□□ -0.33
PBX1-211ENST00000498497 FAM153BP0C7A2 387 aa13□□□□□ -0.33
PBX1-211ENST00000498497 KCNJ2P63252 427 aa13□□□□□ -0.33
PBX1-211ENST00000498497 FAM153CQ494X1 144 aa13□□□□□ -0.33
PBX1-211ENST00000498497 WDR93Q6P2C0 686 aa13□□□□□ -0.33
PBX1-211ENST00000498497 MAB21L3Q8N8X9 362 aa13□□□□□ -0.33
PBX1-211ENST00000498497 VPS16Q9H269 839 aa13□□□□□ -0.33
PBX1-211ENST00000498497 FAM153AQ9UHL3 310 aa13□□□□□ -0.33
PBX1-211ENST00000498497 FBXO3Q9UK99 471 aa13□□□□□ -0.33
PBX1-211ENST00000498497 NFU1Q9UMS0 254 aa13□□□□□ -0.33
PBX1-211ENST00000498497 LEMD3Q9Y2U8 911 aa13□□□□□ -0.33
PBX1-211ENST00000498497 SSH2Q76I76 1423 aa13□□□□□ -0.33
PBX1-211ENST00000498497 NECTIN1Q15223 517 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 BEND3Q5T5X7 828 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 CACNA2D3Q8IZS8 1091 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 EHBP1Q8NDI1 1231 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 ALS2CR12Q96Q35 445 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 OSBPL9Q96SU4 736 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 LRRD1A4D1F6 860 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 IDEP14735 1019 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 RFC5P40937 340 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 ILDR1Q86SU0 546 aaPredicted RBP12.99□□□□□ -0.33
PBX1-211ENST00000498497 MDM1Q8TC05 714 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 STAMQ92783 540 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 ACSBG1Q96GR2 724 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 NOP53Q9NZM5 478 aaKnown RBP12.99□□□□□ -0.33
PBX1-211ENST00000498497 FAM184BQ9ULE4 1060 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 PFDN1O60925 122 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 KIF5BP33176 963 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 ERFP50548 548 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 RNASELQ05823 741 aaKnown RBP12.99□□□□□ -0.33
PBX1-211ENST00000498497 DIXDC1Q155Q3 683 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 TRADDQ15628 312 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 TMEM110Q86TL2 294 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 SEC16BQ96JE7 1060 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 PCMTD2Q9NV79 361 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 DLGAP2Q9P1A6 1054 aa12.99□□□□□ -0.33
PBX1-211ENST00000498497 RNF225M0QZC1 329 aaPredicted RBP12.98□□□□□ -0.33
PBX1-211ENST00000498497 FYB1O15117 783 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 CYP27A1Q02318 531 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 CCDC178Q5BJE1 867 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 CCDC70Q6NSX1 233 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
PBX1-211ENST00000498497 GALNT8Q9NY28 637 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 ANKIB1Q9P2G1 1089 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 SHANK2Q9UPX8 1470 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 ERICH2A1L162 156 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 ETS2P15036 469 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 ROR2Q01974 943 aaKnown RBP12.98□□□□□ -0.33
PBX1-211ENST00000498497 ADALQ6DHV7 355 aa12.98□□□□□ -0.33
PBX1-211ENST00000498497 FOXP4Q8IVH2 680 aaPredicted RBP12.98□□□□□ -0.33
PBX1-211ENST00000498497 RPS6KC1Q96S38 1066 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms