RNA–Protein interactions for RNA: ENST00000498034.5

LMBR1-219, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-219ENST00000498034 USP14P54578 494 aa24.55■■□□□ 1.52
LMBR1-219ENST00000498034 SEPT2Q15019 361 aa24.55■■□□□ 1.52
LMBR1-219ENST00000498034 GCC1Q96CN9 775 aa24.55■■□□□ 1.52
LMBR1-219ENST00000498034 KIAA1683Q9H0B3 1180 aa24.55■■□□□ 1.52
LMBR1-219ENST00000498034 USP17L15C9J2P7 530 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 USP17L13C9JLJ4 530 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 USP17L11C9JVI0 530 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 USP17L18D6R9N7 530 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 USP17L22D6RA61 530 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 USP17L17D6RBQ6 530 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 USP17L19D6RCP7 530 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 USP17L20D6RJB6 530 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 MPHOSPH10O00566 681 aaKnown RBP24.54■■□□□ 1.52
LMBR1-219ENST00000498034 ERVK-9P63128 1117 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 ERVK-24P63145 666 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 USP17L24Q0WX57 530 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 UBE2Q1Q7Z7E8 422 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 SLC44A5Q8NCS7 719 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 DYNLL2Q96FJ2 89 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 DEFB118Q96PH6 123 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 DCTPP1Q9H773 170 aa24.54■■□□□ 1.52
LMBR1-219ENST00000498034 MYH7P12883 1935 aa24.53■■□□□ 1.52
LMBR1-219ENST00000498034 CYP2B6P20813 491 aa24.53■■□□□ 1.52
LMBR1-219ENST00000498034 UBE3CQ15386 1083 aa24.53■■□□□ 1.52
LMBR1-219ENST00000498034 CATSPERGQ6ZRH7 1159 aa24.53■■□□□ 1.52
LMBR1-219ENST00000498034 GTF3C2Q8WUA4 911 aaPredicted RBP24.53■■□□□ 1.52
LMBR1-219ENST00000498034 PORCNQ9H237 461 aa24.53■■□□□ 1.52
LMBR1-219ENST00000498034 PAK6Q9NQU5 681 aaPredicted RBP24.53■■□□□ 1.52
LMBR1-219ENST00000498034 ATP8A2Q9NTI2 1148 aa24.53■■□□□ 1.52
LMBR1-219ENST00000498034 SMIM22K7EJ46 135 aa24.52■■□□□ 1.52
LMBR1-219ENST00000498034 HMGCRP04035 888 aa24.52■■□□□ 1.52
LMBR1-219ENST00000498034 VCAM1P19320 739 aa24.52■■□□□ 1.52
LMBR1-219ENST00000498034 TRIM32Q13049 653 aa24.52■■□□□ 1.52
LMBR1-219ENST00000498034 ECHDC1Q9NTX5 307 aa24.52■■□□□ 1.52
LMBR1-219ENST00000498034 BAZ2AQ9UIF9 1905 aaKnown RBP24.52■■□□□ 1.52
LMBR1-219ENST00000498034 FARP2O94887 1054 aaPredicted RBP24.51■■□□□ 1.51
LMBR1-219ENST00000498034 TFRCP02786 760 aaKnown RBP24.51■■□□□ 1.51
LMBR1-219ENST00000498034 MAPK4P31152 587 aa24.51■■□□□ 1.51
LMBR1-219ENST00000498034 DPF3Q92784 378 aa24.51■■□□□ 1.51
LMBR1-219ENST00000498034 NUDT12Q9BQG2 462 aa24.51■■□□□ 1.51
LMBR1-219ENST00000498034 PUS7LQ9H0K6 701 aaKnown RBP24.51■■□□□ 1.51
LMBR1-219ENST00000498034 CYP2D7A0A087X1C5 515 aa24.5■■□□□ 1.51
LMBR1-219ENST00000498034 A0A1W2PRG0 241 aa24.5■■□□□ 1.51
LMBR1-219ENST00000498034 H0YGN5 161 aa24.5■■□□□ 1.51
LMBR1-219ENST00000498034 CNMDO75829 334 aa24.5■■□□□ 1.51
LMBR1-219ENST00000498034 HABP4Q5JVS0 413 aaKnown RBP24.5■■□□□ 1.51
LMBR1-219ENST00000498034 ZSCAN25Q6NSZ9 544 aa24.5■■□□□ 1.51
LMBR1-219ENST00000498034 CCAR1Q8IX12 1150 aaKnown RBP24.5■■□□□ 1.51
LMBR1-219ENST00000498034 TRIB2Q92519 343 aa24.5■■□□□ 1.51
LMBR1-219ENST00000498034 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.5■■□□□ 1.513e-6■■■■□ 19.8
LMBR1-219ENST00000498034 SWAP70Q9UH65 585 aa24.5■■□□□ 1.51
LMBR1-219ENST00000498034 C12orf60Q5U649 245 aa24.49■■□□□ 1.51
LMBR1-219ENST00000498034 TSHZ3Q63HK5 1081 aa24.49■■□□□ 1.51
LMBR1-219ENST00000498034 GPR142Q7Z601 462 aa24.49■■□□□ 1.51
LMBR1-219ENST00000498034 RPAP3Q9H6T3 665 aaPredicted RBP24.49■■□□□ 1.51
LMBR1-219ENST00000498034 RABGAP1Q9Y3P9 1069 aa24.49■■□□□ 1.51
LMBR1-219ENST00000498034 SLC4A4Q9Y6R1 1079 aa24.49■■□□□ 1.51
LMBR1-219ENST00000498034 USP17L12C9JPN9 530 aa24.48■■□□□ 1.51
LMBR1-219ENST00000498034 USP17L21D6R901 530 aa24.48■■□□□ 1.51
LMBR1-219ENST00000498034 MYH8P13535 1937 aa24.48■■□□□ 1.51
LMBR1-219ENST00000498034 AKR1B1P15121 316 aa24.48■■□□□ 1.51
LMBR1-219ENST00000498034 TMEM179Q6ZVK1 233 aa24.48■■□□□ 1.51
LMBR1-219ENST00000498034 SOCS4Q8WXH5 440 aa24.48■■□□□ 1.51
LMBR1-219ENST00000498034 CRISPLD2Q9H0B8 497 aa24.48■■□□□ 1.51
LMBR1-219ENST00000498034 PCDHB15Q9Y5E8 787 aa24.48■■□□□ 1.51
LMBR1-219ENST00000498034 RPTORQ8N122 1335 aa24.47■■□□□ 1.51
LMBR1-219ENST00000498034 PLEKHH3Q7Z736 793 aa24.47■■□□□ 1.51
LMBR1-219ENST00000498034 CLEC10AQ8IUN9 316 aa24.47■■□□□ 1.51
LMBR1-219ENST00000498034 USP6NLQ92738 828 aa24.47■■□□□ 1.51
LMBR1-219ENST00000498034 HTATIP2Q9BUP3 242 aa24.47■■□□□ 1.51
LMBR1-219ENST00000498034 HMX1Q9NP08 348 aaPredicted RBP24.47■■□□□ 1.51
LMBR1-219ENST00000498034 SPDYE16A6NNV3 312 aaPredicted RBP24.46■■□□□ 1.51
LMBR1-219ENST00000498034 XRCC5P13010 732 aaKnown RBP24.46■■□□□ 1.51
LMBR1-219ENST00000498034 CDK8P49336 464 aa24.46■■□□□ 1.51
LMBR1-219ENST00000498034 MORN1Q5T089 497 aa24.46■■□□□ 1.51
LMBR1-219ENST00000498034 AMOTL1Q8IY63 956 aa24.46■■□□□ 1.51
LMBR1-219ENST00000498034 GPATCH3Q96I76 525 aa24.46■■□□□ 1.51
LMBR1-219ENST00000498034 CWC22Q9HCG8 908 aaKnown RBP24.46■■□□□ 1.51
LMBR1-219ENST00000498034 BTBD7Q9P203 1132 aa24.46■■□□□ 1.51
LMBR1-219ENST00000498034 KIAA1755Q5JYT7 1200 aa24.45■■□□□ 1.5
LMBR1-219ENST00000498034 CTR9Q6PD62 1173 aa24.45■■□□□ 1.5
LMBR1-219ENST00000498034 LBX2Q6XYB7 198 aa24.45■■□□□ 1.5
LMBR1-219ENST00000498034 SIAH1Q8IUQ4 282 aa24.45■■□□□ 1.5
LMBR1-219ENST00000498034 KBTBD3Q8NAB2 608 aa24.45■■□□□ 1.5
LMBR1-219ENST00000498034 DDRGK1Q96HY6 314 aa24.45■■□□□ 1.5
LMBR1-219ENST00000498034 COLQQ9Y215 455 aaPredicted RBP24.45■■□□□ 1.5
LMBR1-219ENST00000498034 CAPN2P17655 700 aa24.44■■□□□ 1.5
LMBR1-219ENST00000498034 RGS2P41220 211 aa24.44■■□□□ 1.5
LMBR1-219ENST00000498034 CCNA1P78396 465 aa24.44■■□□□ 1.5
LMBR1-219ENST00000498034 CCL14Q16627 93 aa24.44■■□□□ 1.5
LMBR1-219ENST00000498034 C16orf86Q6ZW13 317 aa24.44■■□□□ 1.5
LMBR1-219ENST00000498034 STRBPQ96SI9 672 aaKnown RBP24.44■■□□□ 1.5
LMBR1-219ENST00000498034 PRKAR2AP13861 404 aaKnown RBP24.43■■□□□ 1.5
LMBR1-219ENST00000498034 ICA1Q05084 483 aa24.43■■□□□ 1.5
LMBR1-219ENST00000498034 WDR78Q5VTH9 848 aa24.43■■□□□ 1.5
LMBR1-219ENST00000498034 PAWRQ96IZ0 340 aaKnown RBP24.43■■□□□ 1.5
LMBR1-219ENST00000498034 CCDC17Q96LX7 622 aa24.43■■□□□ 1.5
LMBR1-219ENST00000498034 ZKSCAN1P17029 563 aaPredicted RBP24.42■■□□□ 1.5
LMBR1-219ENST00000498034 RRP1P56182 461 aaKnown RBP24.42■■□□□ 1.5
LMBR1-219ENST00000498034 MAP2K5Q13163 448 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms