RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 PTPRAP18433 802 aa23.21■■□□□ 1.31
SCAMP3-209ENST00000497470 PPATQ06203 517 aa23.21■■□□□ 1.31
SCAMP3-209ENST00000497470 DLK2Q6UY11 383 aa23.21■■□□□ 1.31
SCAMP3-209ENST00000497470 DOCK1Q14185 1865 aa23.21■■□□□ 1.31
SCAMP3-209ENST00000497470 SPDYE5A6NIY4 337 aa23.2■■□□□ 1.3
SCAMP3-209ENST00000497470 MCM2P49736 904 aa23.2■■□□□ 1.3
SCAMP3-209ENST00000497470 VGLL4Q14135 290 aa23.2■■□□□ 1.3
SCAMP3-209ENST00000497470 TTLL12Q14166 644 aaPredicted RBP23.2■■□□□ 1.3
SCAMP3-209ENST00000497470 FAM47AQ5JRC9 791 aa23.2■■□□□ 1.3
SCAMP3-209ENST00000497470 CEP95Q96GE4 821 aa23.2■■□□□ 1.3
SCAMP3-209ENST00000497470 MAP3K14Q99558 947 aa23.2■■□□□ 1.3
SCAMP3-209ENST00000497470 SNCAIPQ9Y6H5 919 aa23.2■■□□□ 1.3
SCAMP3-209ENST00000497470 TNKSO95271 1327 aa23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 TMEM88BA6NKF7 163 aa23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 IFIT3O14879 490 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 SLURP2P0DP57 97 aa23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 TOP1P11387 765 aaKnown RBP23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 RCSD1Q6JBY9 416 aa23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 STK11IPQ8N1F8 1099 aa23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 ENAHQ8N8S7 591 aaPredicted RBP23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 ARHGEF10LQ9HCE6 1279 aa23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 PDRG1Q9NUG6 133 aa23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 TMX2Q9Y320 296 aa23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 TLL2Q9Y6L7 1015 aa23.19■■□□□ 1.3
SCAMP3-209ENST00000497470 C19orf81C9J6K1 198 aa23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 MPHOSPH10O00566 681 aaKnown RBP23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 SH2B2O14492 632 aaPredicted RBP23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 ST18O60284 1047 aa23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 GDF11O95390 407 aa23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 NEK4P51957 841 aa23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 JAG1P78504 1218 aa23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 ICA1Q05084 483 aa23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 SEPT2Q15019 361 aa23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 PPP2R5BQ15173 497 aa23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 SAPCD2Q86UD0 394 aa23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 KIAA1683Q9H0B3 1180 aa23.18■■□□□ 1.3
SCAMP3-209ENST00000497470 CXCL11O14625 94 aa23.17■■□□□ 1.3
SCAMP3-209ENST00000497470 WTAPQ15007 396 aa23.17■■□□□ 1.3
SCAMP3-209ENST00000497470 TMEM67Q5HYA8 995 aa23.17■■□□□ 1.3
SCAMP3-209ENST00000497470 SIAH1Q8IUQ4 282 aa23.17■■□□□ 1.3
SCAMP3-209ENST00000497470 NKX2-3Q8TAU0 364 aa23.17■■□□□ 1.3
SCAMP3-209ENST00000497470 ZKSCAN4Q969J2 545 aaPredicted RBP23.17■■□□□ 1.3
SCAMP3-209ENST00000497470 LY9Q9HBG7 655 aa23.17■■□□□ 1.3
SCAMP3-209ENST00000497470 ZBTB48P10074 688 aaPredicted RBP23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 USP14P54578 494 aa23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 FMR1Q06787 632 aaKnown RBP eCLIP23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 PPIL2Q13356 520 aa23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 SH3D19Q5HYK7 790 aa23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 IFIT1BQ5T764 474 aaKnown RBP23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 ZNF280CQ8ND82 737 aa23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 GMCL1P1Q8NEA9 526 aa23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 SLC10A4Q96EP9 437 aa23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 UPF3BQ9BZI7 483 aaKnown RBP23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 ZNF408Q9H9D4 720 aa23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 CREBZFQ9NS37 354 aa23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 KCNH4Q9UQ05 1017 aa23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 AFG3L2Q9Y4W6 797 aa23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 ATAD5Q96QE3 1844 aa23.16■■□□□ 1.3
SCAMP3-209ENST00000497470 OTOFQ9HC10 1997 aa23.15■■□□□ 1.3
SCAMP3-209ENST00000497470 UBE2Q2LH0YL09 131 aa23.15■■□□□ 1.3
SCAMP3-209ENST00000497470 EEF2P13639 858 aaKnown RBP23.15■■□□□ 1.3
SCAMP3-209ENST00000497470 APLP1P51693 650 aa23.15■■□□□ 1.3
SCAMP3-209ENST00000497470 RAB3GAP1Q15042 981 aa23.15■■□□□ 1.3
SCAMP3-209ENST00000497470 LPAR1Q92633 364 aa23.15■■□□□ 1.3
SCAMP3-209ENST00000497470 CHMP4CQ96CF2 233 aa23.15■■□□□ 1.3
SCAMP3-209ENST00000497470 ZNF274Q96GC6 653 aaPredicted RBP23.15■■□□□ 1.3
SCAMP3-209ENST00000497470 C12orf42Q96LP6 360 aa23.15■■□□□ 1.3
SCAMP3-209ENST00000497470 CALM1P0DP23 149 aa23.14■■□□□ 1.29
SCAMP3-209ENST00000497470 CALM2P0DP24 149 aa23.14■■□□□ 1.29
SCAMP3-209ENST00000497470 CALM3P0DP25 149 aa23.14■■□□□ 1.29
SCAMP3-209ENST00000497470 PRKG1Q13976 671 aa23.14■■□□□ 1.29
SCAMP3-209ENST00000497470 Q6ZUG5 572 aa23.14■■□□□ 1.29
SCAMP3-209ENST00000497470 SNX21Q969T3 373 aa23.14■■□□□ 1.29
SCAMP3-209ENST00000497470 TMEM47Q9BQJ4 181 aa23.14■■□□□ 1.29
SCAMP3-209ENST00000497470 STX8Q9UNK0 236 aa23.14■■□□□ 1.29
SCAMP3-209ENST00000497470 USP17L10C9JJH3 530 aa23.13■■□□□ 1.29
SCAMP3-209ENST00000497470 DDAH1O94760 285 aa23.13■■□□□ 1.29
SCAMP3-209ENST00000497470 BACE1P56817 501 aa23.13■■□□□ 1.29
SCAMP3-209ENST00000497470 HUNKP57058 714 aa23.13■■□□□ 1.29
SCAMP3-209ENST00000497470 FGD1P98174 961 aa23.13■■□□□ 1.29
SCAMP3-209ENST00000497470 TOB2Q14106 344 aaPredicted RBP23.13■■□□□ 1.29
SCAMP3-209ENST00000497470 CCDC102AQ96A19 550 aa23.13■■□□□ 1.29
SCAMP3-209ENST00000497470 KAT14Q9H8E8 782 aa23.13■■□□□ 1.29
SCAMP3-209ENST00000497470 CLIP2Q9UDT6 1046 aa23.13■■□□□ 1.29
SCAMP3-209ENST00000497470 ZHX2Q9Y6X8 837 aa23.13■■□□□ 1.29
SCAMP3-209ENST00000497470 NID2Q14112 1375 aa23.13■■□□□ 1.29
SCAMP3-209ENST00000497470 NMT2O60551 498 aa23.12■■□□□ 1.29
SCAMP3-209ENST00000497470 SNHG28P0DPA3 235 aa23.12■■□□□ 1.29
SCAMP3-209ENST00000497470 COL9A3Q14050 684 aaPredicted RBP23.12■■□□□ 1.29
SCAMP3-209ENST00000497470 MOB2Q70IA6 237 aa23.12■■□□□ 1.29
SCAMP3-209ENST00000497470 GMCL1Q96IK5 515 aa23.12■■□□□ 1.29
SCAMP3-209ENST00000497470 ZSCAN31Q96LW9 406 aaPredicted RBP23.12■■□□□ 1.29
SCAMP3-209ENST00000497470 GOPCQ9HD26 462 aa23.12■■□□□ 1.29
SCAMP3-209ENST00000497470 FZD1Q9UP38 647 aa23.12■■□□□ 1.29
SCAMP3-209ENST00000497470 PHIPQ8WWQ0 1821 aa23.11■■□□□ 1.29
SCAMP3-209ENST00000497470 CCDC69A6NI79 296 aa23.11■■□□□ 1.29
SCAMP3-209ENST00000497470 TROAPQ12815 778 aa23.11■■□□□ 1.29
SCAMP3-209ENST00000497470 RGMBQ6NW40 437 aa23.11■■□□□ 1.29
SCAMP3-209ENST00000497470 SYNE3Q6ZMZ3 975 aa23.11■■□□□ 1.29
SCAMP3-209ENST00000497470 CHST3Q7LGC8 479 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms