RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ITIH2P19823 946 aa6.32□□□□□ -1.4
SMC4-225ENST00000497203 RACK1P63244 317 aaKnown RBP6.32□□□□□ -1.4
SMC4-225ENST00000497203 APOBRQ0VD83 1088 aa6.32□□□□□ -1.4
SMC4-225ENST00000497203 CWF19L2Q2TBE0 894 aaKnown RBP6.32□□□□□ -1.4
SMC4-225ENST00000497203 SEZ6Q53EL9 994 aa6.32□□□□□ -1.4
SMC4-225ENST00000497203 KIAA0825Q8IV33 1275 aa6.32□□□□□ -1.4
SMC4-225ENST00000497203 NETO1Q8TDF5 533 aa6.32□□□□□ -1.4
SMC4-225ENST00000497203 EAF1Q96JC9 268 aaPredicted RBP6.32□□□□□ -1.4
SMC4-225ENST00000497203 DRC1Q96MC2 740 aa6.32□□□□□ -1.4
SMC4-225ENST00000497203 SPON2Q9BUD6 331 aa6.32□□□□□ -1.4
SMC4-225ENST00000497203 ACBD3Q9H3P7 528 aa6.32□□□□□ -1.4
SMC4-225ENST00000497203 CAPN10Q9HC96 672 aa6.32□□□□□ -1.4
SMC4-225ENST00000497203 PRDM5Q9NQX1 630 aaPredicted RBP6.32□□□□□ -1.4
SMC4-225ENST00000497203 GTF2IRD1Q9UHL9 959 aa6.32□□□□□ -1.4
SMC4-225ENST00000497203 INPP5FQ9Y2H2 1132 aa6.32□□□□□ -1.4
SMC4-225ENST00000497203 WNT11O96014 354 aa6.31□□□□□ -1.4
SMC4-225ENST00000497203 CEACAM5P06731 702 aa6.31□□□□□ -1.4
SMC4-225ENST00000497203 ARHGAP27Q6ZUM4 889 aa6.31□□□□□ -1.4
SMC4-225ENST00000497203 CDH24Q86UP0 819 aa6.31□□□□□ -1.4
SMC4-225ENST00000497203 VSIG10LQ86VR7 867 aa6.31□□□□□ -1.4
SMC4-225ENST00000497203 FAM13CQ8NE31 585 aa6.31□□□□□ -1.4
SMC4-225ENST00000497203 TINF2Q9BSI4 451 aa6.31□□□□□ -1.4
SMC4-225ENST00000497203 MKNK2Q9HBH9 465 aa6.31□□□□□ -1.4
SMC4-225ENST00000497203 KLHL3Q9UH77 587 aa6.31□□□□□ -1.4
SMC4-225ENST00000497203 TPX2Q9ULW0 747 aaKnown RBP6.31□□□□□ -1.4
SMC4-225ENST00000497203 PCDHB14Q9Y5E9 798 aa6.31□□□□□ -1.4
SMC4-225ENST00000497203 PRR33A8MZF0 331 aa6.3□□□□□ -1.4
SMC4-225ENST00000497203 CHURC1-FNTBB4DL54 471 aa6.3□□□□□ -1.4
SMC4-225ENST00000497203 IFI16Q16666 785 aaKnown RBP6.3□□□□□ -1.4
SMC4-225ENST00000497203 VPS37DQ86XT2 251 aa6.3□□□□□ -1.4
SMC4-225ENST00000497203 WFDC3Q8IUB2 231 aa6.3□□□□□ -1.4
SMC4-225ENST00000497203 DNAJB8Q8NHS0 232 aa6.3□□□□□ -1.4
SMC4-225ENST00000497203 NT5C1AQ9BXI3 368 aa6.3□□□□□ -1.4
SMC4-225ENST00000497203 TNKS2Q9H2K2 1166 aa6.3□□□□□ -1.4
SMC4-225ENST00000497203 ANGEL1Q9UNK9 670 aaKnown RBP6.3□□□□□ -1.4
SMC4-225ENST00000497203 MAPK8IP1Q9UQF2 711 aa6.3□□□□□ -1.4
SMC4-225ENST00000497203 IGSF3O75054 1194 aa6.29□□□□□ -1.4
SMC4-225ENST00000497203 CD96P40200 585 aa6.29□□□□□ -1.4
SMC4-225ENST00000497203 CLCQ05315 142 aa6.29□□□□□ -1.4
SMC4-225ENST00000497203 BNIP3Q12983 259 aa6.29□□□□□ -1.4
SMC4-225ENST00000497203 NKPD1Q17RQ9 610 aa6.29□□□□□ -1.4
SMC4-225ENST00000497203 ZNF574Q6ZN55 896 aaPredicted RBP6.29□□□□□ -1.4
SMC4-225ENST00000497203 SPRED2Q7Z698 418 aa6.29□□□□□ -1.4
SMC4-225ENST00000497203 SLITRK4Q8IW52 837 aa6.29□□□□□ -1.4
SMC4-225ENST00000497203 SPACA3Q8IXA5 215 aa6.29□□□□□ -1.4
SMC4-225ENST00000497203 SLFN12Q8IYM2 578 aa6.29□□□□□ -1.4
SMC4-225ENST00000497203 PPP1R13LQ8WUF5 828 aa6.29□□□□□ -1.4
SMC4-225ENST00000497203 BCL7CQ8WUZ0 217 aaPredicted RBP6.29□□□□□ -1.4
SMC4-225ENST00000497203 SPATA32Q96LK8 384 aa6.29□□□□□ -1.4
SMC4-225ENST00000497203 GNAT3A8MTJ3 354 aa6.28□□□□□ -1.4
SMC4-225ENST00000497203 ATE1O95260 518 aa6.28□□□□□ -1.4
SMC4-225ENST00000497203 MCM4P33991 863 aa6.28□□□□□ -1.4
SMC4-225ENST00000497203 YARSP54577 528 aaKnown RBP6.28□□□□□ -1.4
SMC4-225ENST00000497203 SFRP5Q5T4F7 317 aa6.28□□□□□ -1.4
SMC4-225ENST00000497203 GK5Q6ZS86 529 aa6.28□□□□□ -1.4
SMC4-225ENST00000497203 FLCNQ8NFG4 579 aa6.28□□□□□ -1.4
SMC4-225ENST00000497203 CYB5D2Q8WUJ1 264 aa6.28□□□□□ -1.4
SMC4-225ENST00000497203 NKD1Q969G9 470 aa6.28□□□□□ -1.4
SMC4-225ENST00000497203 EHMT1Q9H9B1 1298 aa6.28□□□□□ -1.4
SMC4-225ENST00000497203 PAK6Q9NQU5 681 aaPredicted RBP6.28□□□□□ -1.4
SMC4-225ENST00000497203 TMEM265A0A087WTH1 108 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 SLC22A31A6NKX4 558 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 CBX7O95931 251 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 ZNF865P0CJ78 1059 aaPredicted RBP6.27□□□□□ -1.41
SMC4-225ENST00000497203 GJA8P48165 433 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 TNNI2P48788 182 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 ARID5AQ03989 594 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 PAK2Q13177 524 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 AOC3Q16853 763 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 ZNF746Q6NUN9 644 aaPredicted RBP6.27□□□□□ -1.41
SMC4-225ENST00000497203 C22orf34Q6ZV56 151 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 REXO1Q8N1G1 1221 aaKnown RBP6.27□□□□□ -1.41
SMC4-225ENST00000497203 MFSD4AQ8N468 514 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 BAHD1Q8TBE0 780 aaPredicted RBP6.27□□□□□ -1.41
SMC4-225ENST00000497203 UBXN4Q92575 508 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 GPRASP2Q96D09 838 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 MISP3Q96FF7 219 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 GMLQ99445 158 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 TANGO6Q9C0B7 1094 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 ADGRE2Q9UHX3 823 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 CEP131Q9UPN4 1083 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 SLC5A6Q9Y289 635 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 CAPN6Q9Y6Q1 641 aa6.27□□□□□ -1.41
SMC4-225ENST00000497203 PRKCQQ04759 706 aa6.26□□□□□ -1.41
SMC4-225ENST00000497203 ARSHQ5FYA8 562 aa6.26□□□□□ -1.41
SMC4-225ENST00000497203 ABI1Q8IZP0 508 aa6.26□□□□□ -1.41
SMC4-225ENST00000497203 STK11IPQ8N1F8 1099 aa6.26□□□□□ -1.41
SMC4-225ENST00000497203 RASGRP4Q8TDF6 673 aa6.26□□□□□ -1.41
SMC4-225ENST00000497203 HRASLS5Q96KN8 279 aa6.26□□□□□ -1.41
SMC4-225ENST00000497203 FBXL18Q96ME1 805 aa6.26□□□□□ -1.41
SMC4-225ENST00000497203 KIF2CQ99661 725 aa6.26□□□□□ -1.41
SMC4-225ENST00000497203 ANTXR1Q9H6X2 564 aa6.26□□□□□ -1.41
SMC4-225ENST00000497203 VAV3Q9UKW4 847 aa6.26□□□□□ -1.41
SMC4-225ENST00000497203 FAM155AB1AL88 458 aaPredicted RBP6.25□□□□□ -1.41
SMC4-225ENST00000497203 CD8BP10966 210 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 ATP2B1P20020 1258 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 CYP7A1P22680 504 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 DNAJA1P31689 397 aaKnown RBP6.25□□□□□ -1.41
SMC4-225ENST00000497203 ETV3P41162 512 aa6.25□□□□□ -1.41
SMC4-225ENST00000497203 ZNF165P49910 485 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms