RNA–Protein interactions for RNA: ENST00000497015.5

SRSF4-205, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 2

Gene SRSF4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-205ENST00000497015 CYP2C19P33261 490 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 MAP2K5Q13163 448 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 PDE3AQ14432 1141 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 E2F4Q16254 413 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 TRIM60Q495X7 471 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 SMYD5Q6GMV2 418 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 FRAT1Q92837 279 aaPredicted RBP12.09□□□□□ -0.47
SRSF4-205ENST00000497015 APBA2Q99767 749 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 PDLIM7Q9NR12 457 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 EMILIN3Q9NT22 766 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 DENND2AQ9ULE3 1009 aa12.09□□□□□ -0.47
SRSF4-205ENST00000497015 IRX3P78415 501 aaPredicted RBP12.08□□□□□ -0.48
SRSF4-205ENST00000497015 MECOMQ03112 1051 aa12.08□□□□□ -0.48
SRSF4-205ENST00000497015 SNX17Q15036 470 aa12.08□□□□□ -0.48
SRSF4-205ENST00000497015 ANO1Q5XXA6 986 aa12.08□□□□□ -0.48
SRSF4-205ENST00000497015 FTSJ3Q8IY81 847 aaKnown RBP12.08□□□□□ -0.48
SRSF4-205ENST00000497015 SPDYE1Q8NFV5 336 aaPredicted RBP12.08□□□□□ -0.48
SRSF4-205ENST00000497015 ASB2Q96Q27 587 aa12.08□□□□□ -0.48
SRSF4-205ENST00000497015 TBC1D2Q9BYX2 928 aa12.08□□□□□ -0.48
SRSF4-205ENST00000497015 DNAJC18Q9H819 358 aa12.08□□□□□ -0.48
SRSF4-205ENST00000497015 PRKAG2Q9UGJ0 569 aa12.08□□□□□ -0.48
SRSF4-205ENST00000497015 RCAN3Q9UKA8 241 aa12.08□□□□□ -0.48
SRSF4-205ENST00000497015 MYH2Q9UKX2 1941 aa12.07□□□□□ -0.48
SRSF4-205ENST00000497015 PYGBP11216 843 aa12.07□□□□□ -0.48
SRSF4-205ENST00000497015 PTPREP23469 700 aa12.07□□□□□ -0.48
SRSF4-205ENST00000497015 CNGA1P29973 690 aa12.07□□□□□ -0.48
SRSF4-205ENST00000497015 RASGRF1Q13972 1273 aa12.07□□□□□ -0.48
SRSF4-205ENST00000497015 ATP2B3Q16720 1220 aa12.07□□□□□ -0.48
SRSF4-205ENST00000497015 CCDC102BQ68D86 513 aa12.07□□□□□ -0.48
SRSF4-205ENST00000497015 PAGR1Q9BTK6 254 aa12.07□□□□□ -0.48
SRSF4-205ENST00000497015 PRDM5Q9NQX1 630 aaPredicted RBP12.07□□□□□ -0.48
SRSF4-205ENST00000497015 ABCF2Q9UG63 623 aa12.07□□□□□ -0.48
SRSF4-205ENST00000497015 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.07□□□□□ -0.48
SRSF4-205ENST00000497015 MROH7-TTC4A0A0A0MT08 1334 aa12.07□□□□□ -0.48
SRSF4-205ENST00000497015 FRMPD3Q5JV73 1810 aa12.07□□□□□ -0.48
SRSF4-205ENST00000497015 RLFQ13129 1914 aa12.06□□□□□ -0.48
SRSF4-205ENST00000497015 SEMA3EO15041 775 aa12.06□□□□□ -0.48
SRSF4-205ENST00000497015 HOXC6P09630 235 aa12.06□□□□□ -0.48
SRSF4-205ENST00000497015 CYBAP13498 195 aa12.06□□□□□ -0.48
SRSF4-205ENST00000497015 TIMM10P62072 90 aa12.06□□□□□ -0.48
SRSF4-205ENST00000497015 MFSD14CQ5VZR4 134 aa12.06□□□□□ -0.48
SRSF4-205ENST00000497015 ZNF467Q7Z7K2 595 aaPredicted RBP12.06□□□□□ -0.48
SRSF4-205ENST00000497015 ADAMTS19Q8TE59 1207 aa12.06□□□□□ -0.48
SRSF4-205ENST00000497015 ATXN2LQ8WWM7 1075 aaKnown RBP12.06□□□□□ -0.48
SRSF4-205ENST00000497015 PPM1EQ8WY54 764 aa12.06□□□□□ -0.48
SRSF4-205ENST00000497015 NECAB3Q96P71 396 aaPredicted RBP12.06□□□□□ -0.48
SRSF4-205ENST00000497015 ZMYND15Q9H091 742 aa12.06□□□□□ -0.48
SRSF4-205ENST00000497015 SIL1Q9H173 461 aa12.06□□□□□ -0.48
SRSF4-205ENST00000497015 ZNF576Q9H609 170 aa12.06□□□□□ -0.48
SRSF4-205ENST00000497015 GNL3LQ9NVN8 582 aaKnown RBP12.06□□□□□ -0.48
SRSF4-205ENST00000497015 MYH13Q9UKX3 1938 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 C19orf81C9J6K1 198 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 DNAJB2P25686 324 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 ADCYAP1R1P41586 468 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 TLE2Q04725 743 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 MTX1Q13505 466 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 ADGRE1Q14246 886 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 PRAMEF19Q5SWL8 479 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 DZIP1Q86YF9 867 aaKnown RBP12.05□□□□□ -0.48
SRSF4-205ENST00000497015 FERMT2Q96AC1 680 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 MEIS3Q99687 375 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 CHMP4BQ9H444 224 aaKnown RBP12.05□□□□□ -0.48
SRSF4-205ENST00000497015 AS3MTQ9HBK9 375 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 TMOD4Q9NZQ9 345 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 BTBD7Q9P203 1132 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 REV3LO60673 3130 aa12.05□□□□□ -0.48
SRSF4-205ENST00000497015 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.04□□□□□ -0.48
SRSF4-205ENST00000497015 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.04□□□□□ -0.48
SRSF4-205ENST00000497015 SLC15A5A6NIM6 579 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 GRXCR1A8MXD5 290 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 USP17L10C9JJH3 530 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 PBX2P40425 430 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 ATP2B2Q01814 1243 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 C1orf53Q5VUE5 145 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 TBC1D9Q6ZT07 1266 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 C16orf59Q7L2K0 433 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 METTL16Q86W50 562 aaKnown RBP12.04□□□□□ -0.48
SRSF4-205ENST00000497015 TMEM57Q8N5G2 664 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 CLUAP1Q96AJ1 413 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 NSUN4Q96CB9 384 aaKnown RBP12.04□□□□□ -0.48
SRSF4-205ENST00000497015 RNPC3Q96LT9 517 aaKnown RBP12.04□□□□□ -0.48
SRSF4-205ENST00000497015 CEP126Q9P2H0 1117 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 PA2G4Q9UQ80 394 aaKnown RBP12.04□□□□□ -0.48
SRSF4-205ENST00000497015 RABGAP1Q9Y3P9 1069 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 XIRP2A4UGR9 3374 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 CHD9Q3L8U1 2897 aa12.04□□□□□ -0.48
SRSF4-205ENST00000497015 ATAD5Q96QE3 1844 aa12.03□□□□□ -0.48
SRSF4-205ENST00000497015 MSCO60682 206 aa12.03□□□□□ -0.48
SRSF4-205ENST00000497015 CIAO1O76071 339 aa12.03□□□□□ -0.48
SRSF4-205ENST00000497015 GDF11O95390 407 aa12.03□□□□□ -0.48
SRSF4-205ENST00000497015 GNAI2P04899 355 aa12.03□□□□□ -0.48
SRSF4-205ENST00000497015 GRB14Q14449 540 aa12.03□□□□□ -0.48
SRSF4-205ENST00000497015 PI16Q6UXB8 463 aa12.03□□□□□ -0.48
SRSF4-205ENST00000497015 ZGPATQ8N5A5 531 aaKnown RBP12.03□□□□□ -0.48
SRSF4-205ENST00000497015 ARRDC4Q8NCT1 418 aa12.03□□□□□ -0.48
SRSF4-205ENST00000497015 SH3RF3Q8TEJ3 882 aaPredicted RBP12.03□□□□□ -0.48
SRSF4-205ENST00000497015 UHRF1Q96T88 793 aaPredicted RBP12.03□□□□□ -0.48
SRSF4-205ENST00000497015 PRDM12Q9H4Q4 367 aa12.03□□□□□ -0.48
SRSF4-205ENST00000497015 HERC5Q9UII4 1024 aaKnown RBP12.03□□□□□ -0.48
SRSF4-205ENST00000497015 SIPA1L1O43166 1804 aa12.02□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms