RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 BNIP3Q12983 259 aa7.36□□□□□ -1.23
TRIM4-205ENST00000496896 ANGEL2Q5VTE6 544 aaKnown RBP7.36□□□□□ -1.23
TRIM4-205ENST00000496896 FBXL19Q6PCT2 694 aa7.36□□□□□ -1.23
TRIM4-205ENST00000496896 ZNF574Q6ZN55 896 aaPredicted RBP7.36□□□□□ -1.23
TRIM4-205ENST00000496896 RIN3Q8TB24 985 aa7.36□□□□□ -1.23
TRIM4-205ENST00000496896 CYB5D2Q8WUJ1 264 aa7.36□□□□□ -1.23
TRIM4-205ENST00000496896 COPRSQ9NQ92 184 aa7.36□□□□□ -1.23
TRIM4-205ENST00000496896 METTL5Q9NRN9 209 aaKnown RBP7.36□□□□□ -1.23
TRIM4-205ENST00000496896 CORINQ9Y5Q5 1042 aa7.36□□□□□ -1.23
TRIM4-205ENST00000496896 CAPN6Q9Y6Q1 641 aa7.36□□□□□ -1.23
TRIM4-205ENST00000496896 PITPNM2Q9BZ72 1349 aa7.35□□□□□ -1.23
TRIM4-205ENST00000496896 PLCL1Q15111 1095 aa7.35□□□□□ -1.23
TRIM4-205ENST00000496896 CWF19L2Q2TBE0 894 aaKnown RBP7.35□□□□□ -1.23
TRIM4-205ENST00000496896 THAP5Q7Z6K1 395 aa7.35□□□□□ -1.23
TRIM4-205ENST00000496896 DNAJB8Q8NHS0 232 aa7.35□□□□□ -1.23
TRIM4-205ENST00000496896 PIWIL2Q8TC59 973 aaKnown RBP7.35□□□□□ -1.23
TRIM4-205ENST00000496896 CEP131Q9UPN4 1083 aa7.35□□□□□ -1.23
TRIM4-205ENST00000496896 POLR3KQ9Y2Y1 108 aaPredicted RBP7.35□□□□□ -1.23
TRIM4-205ENST00000496896 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.35□□□□□ -1.23
TRIM4-205ENST00000496896 CNTNAP4Q9C0A0 1308 aa7.34□□□□□ -1.23
TRIM4-205ENST00000496896 ATE1O95260 518 aa7.34□□□□□ -1.23
TRIM4-205ENST00000496896 HTR3BO95264 441 aa7.34□□□□□ -1.23
TRIM4-205ENST00000496896 ZNF792Q3KQV3 632 aa7.34□□□□□ -1.23
TRIM4-205ENST00000496896 KRTAP19-4Q3LI73 84 aa7.34□□□□□ -1.23
TRIM4-205ENST00000496896 TMEM87AQ8NBN3 555 aa7.34□□□□□ -1.23
TRIM4-205ENST00000496896 KRTAP17-1Q9BYP8 105 aa7.34□□□□□ -1.23
TRIM4-205ENST00000496896 LMCD1Q9NZU5 365 aa7.34□□□□□ -1.23
TRIM4-205ENST00000496896 REV1Q9UBZ9 1251 aa7.34□□□□□ -1.23
TRIM4-205ENST00000496896 ST14Q9Y5Y6 855 aa7.34□□□□□ -1.23
TRIM4-205ENST00000496896 PRR33A8MZF0 331 aa7.33□□□□□ -1.24
TRIM4-205ENST00000496896 FAM155AB1AL88 458 aaPredicted RBP7.33□□□□□ -1.24
TRIM4-205ENST00000496896 SLC23A3Q6PIS1 610 aa7.33□□□□□ -1.24
TRIM4-205ENST00000496896 KSR1Q8IVT5 923 aa7.33□□□□□ -1.24
TRIM4-205ENST00000496896 FAM13CQ8NE31 585 aa7.33□□□□□ -1.24
TRIM4-205ENST00000496896 XAGE3Q8WTP9 111 aa7.33□□□□□ -1.24
TRIM4-205ENST00000496896 PPP1R13LQ8WUF5 828 aa7.33□□□□□ -1.24
TRIM4-205ENST00000496896 ZNF296Q8WUU4 475 aaPredicted RBP7.33□□□□□ -1.24
TRIM4-205ENST00000496896 DPH2Q9BQC3 489 aaPredicted RBP7.33□□□□□ -1.24
TRIM4-205ENST00000496896 BACH2Q9BYV9 841 aa7.33□□□□□ -1.24
TRIM4-205ENST00000496896 SEMA3GQ9NS98 782 aa7.33□□□□□ -1.24
TRIM4-205ENST00000496896 ZNF76P36508 570 aa7.32□□□□□ -1.24
TRIM4-205ENST00000496896 TRIM26Q12899 539 aaPredicted RBP7.32□□□□□ -1.24
TRIM4-205ENST00000496896 MLECQ14165 292 aa7.32□□□□□ -1.24
TRIM4-205ENST00000496896 CDH24Q86UP0 819 aa7.32□□□□□ -1.24
TRIM4-205ENST00000496896 REXO1Q8N1G1 1221 aaKnown RBP7.32□□□□□ -1.24
TRIM4-205ENST00000496896 FBXO27Q8NI29 283 aa7.32□□□□□ -1.24
TRIM4-205ENST00000496896 EHMT1Q9H9B1 1298 aa7.32□□□□□ -1.24
TRIM4-205ENST00000496896 ADAMTS1Q9UHI8 967 aa7.32□□□□□ -1.24
TRIM4-205ENST00000496896 CARMIL2Q6F5E8 1435 aa7.32□□□□□ -1.24
TRIM4-205ENST00000496896 CD96P40200 585 aa7.31□□□□□ -1.24
TRIM4-205ENST00000496896 FANCCQ00597 558 aa7.31□□□□□ -1.24
TRIM4-205ENST00000496896 ATG4DQ86TL0 474 aaPredicted RBP7.31□□□□□ -1.24
TRIM4-205ENST00000496896 PI4K2BQ8TCG2 481 aa7.31□□□□□ -1.24
TRIM4-205ENST00000496896 HSPA12BQ96MM6 686 aa7.31□□□□□ -1.24
TRIM4-205ENST00000496896 NT5C1AQ9BXI3 368 aa7.31□□□□□ -1.24
TRIM4-205ENST00000496896 MBNL3Q9NUK0 354 aaKnown RBP7.31□□□□□ -1.24
TRIM4-205ENST00000496896 UPK3BL1B0FP48 263 aa7.3□□□□□ -1.24
TRIM4-205ENST00000496896 UPK3BL2E5RIL1 263 aa7.3□□□□□ -1.24
TRIM4-205ENST00000496896 GRIN3BO60391 1043 aa7.3□□□□□ -1.24
TRIM4-205ENST00000496896 RNASE1P07998 156 aaKnown RBP7.3□□□□□ -1.24
TRIM4-205ENST00000496896 TNK2Q07912 1038 aa7.3□□□□□ -1.24
TRIM4-205ENST00000496896 IKZF1Q13422 519 aa7.3□□□□□ -1.24
TRIM4-205ENST00000496896 CCDC74BQ96LY2 380 aa7.3□□□□□ -1.24
TRIM4-205ENST00000496896 SLC38A3Q99624 504 aa7.3□□□□□ -1.24
TRIM4-205ENST00000496896 ADAMTS6Q9UKP5 1117 aa7.3□□□□□ -1.24
TRIM4-205ENST00000496896 CBX7O95931 251 aa7.29□□□□□ -1.24
TRIM4-205ENST00000496896 CRKP46108 304 aa7.29□□□□□ -1.24
TRIM4-205ENST00000496896 SLITRK4Q8IW52 837 aa7.29□□□□□ -1.24
TRIM4-205ENST00000496896 RNF141Q8WVD5 230 aa7.29□□□□□ -1.24
TRIM4-205ENST00000496896 BRMS1Q9HCU9 246 aa7.29□□□□□ -1.24
TRIM4-205ENST00000496896 GMIPQ9P107 970 aa7.29□□□□□ -1.24
TRIM4-205ENST00000496896 TLR3O15455 904 aaKnown RBP7.28□□□□□ -1.24
TRIM4-205ENST00000496896 ZP2Q05996 745 aa7.28□□□□□ -1.24
TRIM4-205ENST00000496896 APOBRQ0VD83 1088 aa7.28□□□□□ -1.24
TRIM4-205ENST00000496896 TMPRSS7Q7RTY8 843 aa7.28□□□□□ -1.24
TRIM4-205ENST00000496896 KIAA0825Q8IV33 1275 aa7.28□□□□□ -1.24
TRIM4-205ENST00000496896 Q96M66 194 aa7.28□□□□□ -1.24
TRIM4-205ENST00000496896 ASPNQ9BXN1 380 aa7.28□□□□□ -1.24
TRIM4-205ENST00000496896 RC3H2Q9HBD1 1191 aaKnown RBP7.28□□□□□ -1.24
TRIM4-205ENST00000496896 KCNH3Q9ULD8 1083 aa7.28□□□□□ -1.24
TRIM4-205ENST00000496896 PCDHB14Q9Y5E9 798 aa7.28□□□□□ -1.24
TRIM4-205ENST00000496896 SLC22A31A6NKX4 558 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 CHURC1-FNTBB4DL54 471 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 SCAMP3O14828 347 aaKnown RBP7.27□□□□□ -1.25
TRIM4-205ENST00000496896 RGS13O14921 159 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 DNAJA2O60884 412 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 RECKO95980 971 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 SRFP11831 508 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 ZNF165P49910 485 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 CDKAL1Q5VV42 579 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 CDCP2Q5VXM1 449 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 FLAD1Q8NFF5 587 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 FAM168AQ92567 244 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 RNF34Q969K3 372 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 SPON2Q9BUD6 331 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 GPR62Q9BZJ7 368 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 TRIT1Q9H3H1 467 aaKnown RBP7.27□□□□□ -1.25
TRIM4-205ENST00000496896 ATP13A1Q9HD20 1204 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 UBP1Q9NZI7 540 aa7.27□□□□□ -1.25
TRIM4-205ENST00000496896 KLHL3Q9UH77 587 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms