RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 MORC2Q9Y6X9 1032 aaPredicted RBP14.99□□□□□ -0.01
GARNL3-220ENST00000496711 V9GY48 417 aaPredicted RBP14.99□□□□□ -0.01
GARNL3-220ENST00000496711 LDHCP07864 332 aa14.98□□□□□ -0.01
GARNL3-220ENST00000496711 ATP2B4P23634 1241 aa14.98□□□□□ -0.01
GARNL3-220ENST00000496711 CCDC144BQ3MJ40 725 aa14.98□□□□□ -0.01
GARNL3-220ENST00000496711 METTL16Q86W50 562 aaKnown RBP14.98□□□□□ -0.01
GARNL3-220ENST00000496711 ELOA2Q8IYF1 753 aaPredicted RBP14.98□□□□□ -0.01
GARNL3-220ENST00000496711 ZNF579Q8NAF0 562 aaKnown RBP14.98□□□□□ -0.01
GARNL3-220ENST00000496711 CNNM3Q8NE01 707 aa14.98□□□□□ -0.01
GARNL3-220ENST00000496711 GPR101Q96P66 508 aaPredicted RBP14.98□□□□□ -0.01
GARNL3-220ENST00000496711 CABP5Q9NP86 173 aa14.98□□□□□ -0.01
GARNL3-220ENST00000496711 hCG_1642624A0A1W2PR95 340 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 SMTNL1A8MU46 457 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 PPP4CP60510 307 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 PNOCQ13519 176 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 DIXDC1Q155Q3 683 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 CERS3Q8IU89 383 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 HOOK1Q9UJC3 728 aaKnown RBP14.97□□□□□ -0.01
GARNL3-220ENST00000496711 GGA1Q9UJY5 639 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 SRPRBQ9Y5M8 271 aaKnown RBP14.97□□□□□ -0.01
GARNL3-220ENST00000496711 BAZ2BQ9UIF8 2168 aaKnown RBP14.97□□□□□ -0.01
GARNL3-220ENST00000496711 MYH8P13535 1937 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 NRXN2Q9P2S2 1712 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 TRIM75PA6NK02 468 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 IKBKBO14920 756 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 LRMPQ12912 555 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 SLC4A8Q2Y0W8 1093 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 LONRF3Q496Y0 759 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 RCSD1Q6JBY9 416 aa14.97□□□□□ -0.01
GARNL3-220ENST00000496711 SRBD1Q8N5C6 995 aaKnown RBP14.97□□□□□ -0.01
GARNL3-220ENST00000496711 QSER1Q2KHR3 1735 aa14.96□□□□□ -0.01
GARNL3-220ENST00000496711 UQCRHLA0A096LP55 91 aa14.96□□□□□ -0.01
GARNL3-220ENST00000496711 FAM205CA6NFA0 338 aa14.96□□□□□ -0.01
GARNL3-220ENST00000496711 UQCRHP07919 91 aa14.96□□□□□ -0.01
GARNL3-220ENST00000496711 IL1R1P14778 569 aa14.96□□□□□ -0.01
GARNL3-220ENST00000496711 KIF5BP33176 963 aa14.96□□□□□ -0.01
GARNL3-220ENST00000496711 GRIN1Q05586 938 aa14.96□□□□□ -0.01
GARNL3-220ENST00000496711 GRIK5Q16478 980 aa14.96□□□□□ -0.01
GARNL3-220ENST00000496711 SPECC1Q5M775 1068 aa14.96□□□□□ -0.01
GARNL3-220ENST00000496711 RTFDC1Q9BY42 306 aaPredicted RBP14.96□□□□□ -0.01
GARNL3-220ENST00000496711 KAT14Q9H8E8 782 aa14.96□□□□□ -0.01
GARNL3-220ENST00000496711 CD209Q9NNX6 404 aa14.96□□□□□ -0.01
GARNL3-220ENST00000496711 NEMFO60524 1076 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 BMP15O95972 392 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 SCG2P13521 617 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 ATP2B1P20020 1258 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 TFAP4Q01664 338 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 NCAPHQ15003 741 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 CCDC178Q5BJE1 867 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 DGKHQ86XP1 1220 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 CACTINQ8WUQ7 758 aaKnown RBP14.95□□□□□ -0.02
GARNL3-220ENST00000496711 PODXL2Q9NZ53 605 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 BBOX1O75936 387 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 HOXA10P31260 410 aaPredicted RBP14.95□□□□□ -0.02
GARNL3-220ENST00000496711 DDR1Q08345 913 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 NPY5RQ15761 445 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 PFKFB3Q16875 520 aaPredicted RBP14.95□□□□□ -0.02
GARNL3-220ENST00000496711 TNFRSF25Q93038 417 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 DYNLL2Q96FJ2 89 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 PRIMPOLQ96LW4 560 aa14.95□□□□□ -0.02
GARNL3-220ENST00000496711 POLRMTO00411 1230 aaKnown RBP14.94□□□□□ -0.02
GARNL3-220ENST00000496711 BTDP43251 543 aa14.94□□□□□ -0.02
GARNL3-220ENST00000496711 POSTNQ15063 836 aa14.94□□□□□ -0.02
GARNL3-220ENST00000496711 EARS2Q5JPH6 523 aaKnown RBP14.94□□□□□ -0.02
GARNL3-220ENST00000496711 ISM2Q6H9L7 571 aa14.94□□□□□ -0.02
GARNL3-220ENST00000496711 OLFM4Q6UX06 510 aa14.94□□□□□ -0.02
GARNL3-220ENST00000496711 TGFBRAP1Q8WUH2 860 aa14.94□□□□□ -0.02
GARNL3-220ENST00000496711 ANKS1AQ92625 1134 aa14.94□□□□□ -0.02
GARNL3-220ENST00000496711 CRAMP1Q96RY5 1269 aa14.94□□□□□ -0.02
GARNL3-220ENST00000496711 CSRNP2Q9H175 543 aa14.94□□□□□ -0.02
GARNL3-220ENST00000496711 QTRT2Q9H974 415 aaKnown RBP14.94□□□□□ -0.02
GARNL3-220ENST00000496711 MKNK2Q9HBH9 465 aa14.94□□□□□ -0.02
GARNL3-220ENST00000496711 IL17RBQ9NRM6 502 aa14.94□□□□□ -0.02
GARNL3-220ENST00000496711 SNED1Q8TER0 1413 aa14.94□□□□□ -0.02
GARNL3-220ENST00000496711 POLR2DO15514 142 aaKnown RBP14.93□□□□□ -0.02
GARNL3-220ENST00000496711 MDM2Q00987 491 aaPredicted RBP14.93□□□□□ -0.02
GARNL3-220ENST00000496711 MYL5Q02045 173 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 LRRC8AQ8IWT6 810 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 PNMA1Q8ND90 353 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 TCP11L1Q9NUJ3 509 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 PCDHA5Q9Y5H7 936 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 COL11A2P13942 1736 aaPredicted RBP14.93□□□□□ -0.02
GARNL3-220ENST00000496711 SMC2O95347 1197 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 TSPY3P0CV98 308 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 TSPY8P0CW00 308 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 PLCG2P16885 1265 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 GSDMDP57764 484 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 GRM4Q14833 912 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 TTC38Q5R3I4 469 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 KANK3Q6NY19 840 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 KRT27Q7Z3Y8 459 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 TMC4Q7Z404 712 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 MAPKAPK5Q8IW41 473 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 TBC1D16Q8TBP0 767 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 FERMT2Q96AC1 680 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 XPO4Q9C0E2 1151 aaKnown RBP14.93□□□□□ -0.02
GARNL3-220ENST00000496711 IMPACTQ9P2X3 320 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 SERTAD1Q9UHV2 236 aa14.93□□□□□ -0.02
GARNL3-220ENST00000496711 GPR75-ASB3A0A0A6YYF3 556 aa14.92□□□□□ -0.02
GARNL3-220ENST00000496711 FOXN1O15353 648 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms