RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 ADGRL1O94910 1474 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 SOWAHDA6NJG2 315 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 LARGE1O95461 756 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 FMNL1O95466 1100 aaPredicted RBP9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 NSD2O96028 1365 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 SKIP12755 728 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 ATP4AP20648 1035 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 MAGI3Q5TCQ9 1506 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 TSHZ1Q6ZSZ6 1077 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 RBM41Q96IZ5 413 aaKnown RBP9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 SLF1Q9BQI6 1058 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 SLC39A2Q9NP94 309 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 STIM2Q9P246 746 aa9.1□□□□□ -0.95
CRNKL1-205ENST00000496549 A0A1W2PQ27 194 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 A0A1W2PQ64 194 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 A0A1W2PQD8 194 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 EIF4E1BA6NMX2 242 aaKnown RBP9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 POLR3DP05423 398 aaPredicted RBP9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 PYGBP11216 843 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 SCTRP47872 440 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 HDLBPQ00341 1268 aaKnown RBP9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 FKBP15Q5T1M5 1219 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 PROCA1Q8NCQ7 364 aaPredicted RBP9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 MBIPQ9NS73 344 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 ITGB1BP2Q9UKP3 347 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 EID1Q9Y6B2 187 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 NUTM2FA1L443 756 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 CEBPAP49715 358 aaPredicted RBP9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 NUTM2GQ5VZR2 741 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 KANK3Q6NY19 840 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 NCAPG2Q86XI2 1143 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 PLEKHG4BQ96PX9 1271 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 NEK1Q96PY6 1258 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 USP28Q96RU2 1077 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 CARD14Q9BXL6 1004 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 FAM114A2Q9NRY5 505 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 RHBDL2Q9NX52 303 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 RASSF9O75901 435 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 TROVE2P10155 538 aaKnown RBP eCLIP9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 PAX3P23760 479 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 YY1P25490 414 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 GGT6Q6P531 493 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 GSPT2Q8IYD1 628 aaKnown RBP9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 ZNF653Q96CK0 615 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 IRX2Q9BZI1 471 aaPredicted RBP9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 MIS12Q9H081 205 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 ADGRG1Q9Y653 693 aa9.09□□□□□ -0.95
CRNKL1-205ENST00000496549 DNMT1P26358 1616 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 RTN2O75298 545 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 TRIM21P19474 475 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 CA8P35219 290 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 SKOR1P84550 965 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 SEPT7Q16181 437 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 SPATA24Q86W54 205 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 MLKLQ8NB16 471 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 NOA1Q8NC60 698 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 ZCRB1Q8TBF4 217 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 EPAS1Q99814 870 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 LLPHQ9BRT6 129 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 UBA5Q9GZZ9 404 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 STMN4Q9H169 189 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 EHD4Q9H223 541 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 RBM47A0AV96 593 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 CCDC178Q5BJE1 867 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 FAM133BQ5BKY9 247 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 TCERG1LQ5VWI1 586 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 GRAMD4Q6IC98 578 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 PPP4R3AQ6IN85 833 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 CCNI2Q6ZMN8 369 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 TSPYL6Q8N831 410 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 RUBCNQ92622 972 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 EVI5LQ96CN4 794 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 TAOK3Q9H2K8 898 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 RPS6KB1P23443 525 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 SLC44A4Q53GD3 710 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 GLE1Q53GS7 698 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 TMEM154Q6P9G4 183 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 KDM7AQ6ZMT4 941 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 APBB1IPQ7Z5R6 666 aaPredicted RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 GALNT15Q8N3T1 639 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 PRAM1Q96QH2 718 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 CENPKQ9BS16 269 aa9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 ESF1Q9H501 851 aaKnown RBP9.08□□□□□ -0.96
CRNKL1-205ENST00000496549 PPRC1Q5VV67 1664 aaKnown RBP9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 MYOM2P54296 1465 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 SEC24CP53992 1094 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 MTMR3Q13615 1198 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 ANKRD20A8PQ5CZ79 823 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 INTS8Q75QN2 995 aaKnown RBP9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 HOOK3Q86VS8 718 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 UBLCP1Q8WVY7 318 aaPredicted RBP9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 KIFC2Q96AC6 838 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 IQCDQ96DY2 449 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 NAF1Q96HR8 494 aaKnown RBP9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 C2CD2Q9Y426 696 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 MAP3K4Q9Y6R4 1608 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 ENC1O14682 589 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 PRPF6O94906 941 aaKnown RBP9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 GSTA2P09210 222 aa9.07□□□□□ -0.96
CRNKL1-205ENST00000496549 VIL1P09327 827 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms