RNA–Protein interactions for RNA: ENST00000496318.5

HLA-DQA1-207, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-207ENST00000496318 SEC62Q99442 399 aaKnown RBP14.01□□□□□ -0.17
HLA-DQA1-207ENST00000496318 TMOD4Q9NZQ9 345 aa14.01□□□□□ -0.17
HLA-DQA1-207ENST00000496318 PNMA3Q9UL41 463 aa14.01□□□□□ -0.17
HLA-DQA1-207ENST00000496318 SLC4A4Q9Y6R1 1079 aa14.01□□□□□ -0.17
HLA-DQA1-207ENST00000496318 DNAH12Q6ZR08 3092 aa14.01□□□□□ -0.17
HLA-DQA1-207ENST00000496318 USP17L12C9JPN9 530 aa14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 USP17L21D6R901 530 aa14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 HERVK_113P62684 666 aa14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 TRIM32Q13049 653 aa14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 ARHGEF6Q15052 776 aa14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 FAM110CQ1W6H9 321 aa14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 PI4K2BQ8TCG2 481 aa14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 DDX24Q9GZR7 859 aaKnown RBP eCLIP14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 UNC93B1Q9H1C4 597 aa14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 BIN2Q9UBW5 565 aaPredicted RBP14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 SMCHD1A6NHR9 2005 aa14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 MCM3APO60318 1980 aa14□□□□□ -0.17
HLA-DQA1-207ENST00000496318 ADCY3O60266 1144 aa13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 INHAP05111 366 aa13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 CCL5P13501 91 aa13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 VCAM1P19320 739 aa13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 UBE3CQ15386 1083 aa13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 Q3C1V9 767 aa13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 CERS3Q8IU89 383 aa13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 KBTBD3Q8NAB2 608 aa13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 TMEM106CQ9BVX2 250 aa13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 PORCNQ9H237 461 aa13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 EPB41L4AQ9HCS5 686 aaPredicted RBP13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 PCDH10Q9P2E7 1040 aa13.99□□□□□ -0.17
HLA-DQA1-207ENST00000496318 IGSF3O75054 1194 aa13.98□□□□□ -0.17
HLA-DQA1-207ENST00000496318 CNMDO75829 334 aa13.98□□□□□ -0.17
HLA-DQA1-207ENST00000496318 CTR9Q6PD62 1173 aa13.98□□□□□ -0.17
HLA-DQA1-207ENST00000496318 USP17L2Q6R6M4 530 aa13.98□□□□□ -0.17
HLA-DQA1-207ENST00000496318 SAMD1Q6SPF0 538 aaPredicted RBP13.98□□□□□ -0.17
HLA-DQA1-207ENST00000496318 NBPF11Q86T75 865 aa13.98□□□□□ -0.17
HLA-DQA1-207ENST00000496318 EXOC6Q8TAG9 804 aa13.98□□□□□ -0.17
HLA-DQA1-207ENST00000496318 TBC1D2Q9BYX2 928 aa13.98□□□□□ -0.17
HLA-DQA1-207ENST00000496318 RBPJLQ9UBG7 517 aa13.98□□□□□ -0.17
HLA-DQA1-207ENST00000496318 SALL3Q9BXA9 1300 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 RANBP2P49792 3224 aaKnown RBP13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 C19orf81C9J6K1 198 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 GNRH1P01148 92 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 HOXD10P28358 340 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 HOXA7P31268 230 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 CDK8P49336 464 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 IRX6P78412 446 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 PABPC4Q13310 644 aaKnown RBP eCLIP13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 ANKRD45Q5TZF3 282 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 C12orf60Q5U649 245 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 CCDC129Q6ZRS4 1044 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 SIAH1Q8IUQ4 282 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 SPICE1Q8N0Z3 855 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 STRBPQ96SI9 672 aaKnown RBP13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 RNF208Q9H0X6 261 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 RPAP3Q9H6T3 665 aaPredicted RBP13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 CABP5Q9NP86 173 aa13.97□□□□□ -0.17
HLA-DQA1-207ENST00000496318 GSG1L2A8MUP6 293 aa13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 RNF113AO15541 343 aaKnown RBP13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 GPAA1O43292 621 aa13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 MX1P20591 662 aa13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 CYP2B6P20813 491 aa13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 GCLCP48506 637 aaPredicted RBP13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 PRMT2P55345 433 aa13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 ERVK-9P63128 1117 aa13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 ERVK-24P63145 666 aa13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 GPATCH3Q96I76 525 aa13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 KIAA1683Q9H0B3 1180 aa13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 BTBD7Q9P203 1132 aa13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 MORF4L1Q9UBU8 362 aa13.96□□□□□ -0.17
HLA-DQA1-207ENST00000496318 SPDYE16A6NNV3 312 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 MINDY4BA8MYZ0 360 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 PRDM1O75626 825 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 ATP2B2Q01814 1243 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 CCL14Q16627 93 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 B4GALNT3Q6L9W6 998 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 TMED8Q6PL24 325 aaPredicted RBP13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 C16orf86Q6ZW13 317 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 SLAIN1Q8ND83 568 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 TRIB2Q92519 343 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 APPBP2Q92624 585 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 COA7Q96BR5 231 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 C12orf42Q96LP6 360 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 FSD1Q9BTV5 496 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 ATP8A2Q9NTI2 1148 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 GINM1Q9NU53 330 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 GJD2Q9UKL4 321 aa13.95□□□□□ -0.18
HLA-DQA1-207ENST00000496318 IGHDP01880 384 aa13.94□□□□□ -0.18
HLA-DQA1-207ENST00000496318 ICA1Q05084 483 aa13.94□□□□□ -0.18
HLA-DQA1-207ENST00000496318 WDR78Q5VTH9 848 aa13.94□□□□□ -0.18
HLA-DQA1-207ENST00000496318 ZSCAN25Q6NSZ9 544 aa13.94□□□□□ -0.18
HLA-DQA1-207ENST00000496318 CATSPERGQ6ZRH7 1159 aa13.94□□□□□ -0.18
HLA-DQA1-207ENST00000496318 GPRC5AQ8NFJ5 357 aa13.94□□□□□ -0.18
HLA-DQA1-207ENST00000496318 CHMP4CQ96CF2 233 aa13.94□□□□□ -0.18
HLA-DQA1-207ENST00000496318 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.94□□□□□ -0.18
HLA-DQA1-207ENST00000496318 TANGO6Q9C0B7 1094 aa13.94□□□□□ -0.18
HLA-DQA1-207ENST00000496318 LNPKQ9C0E8 428 aa13.94□□□□□ -0.18
HLA-DQA1-207ENST00000496318 LAMA4Q16363 1823 aa13.94□□□□□ -0.18
HLA-DQA1-207ENST00000496318 TTC41PQ6P2S7 1318 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 ZNF236Q9UL36 1845 aa13.93□□□□□ -0.18
HLA-DQA1-207ENST00000496318 USP17L15C9J2P7 530 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms