RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 MCAMP43121 646 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 EVCP57679 992 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 CCDC183Q5T5S1 534 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 SLC9C2Q5TAH2 1124 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 NAA16Q6N069 864 aaPredicted RBP10.09□□□□□ -0.79
EPHA4-213ENST00000495693 LRSAM1Q6UWE0 723 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 TPTE2Q6XPS3 522 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 CCDC129Q6ZRS4 1044 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 OSBP2Q969R2 916 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 TMEM87BQ96K49 555 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 NLRP3Q96P20 1036 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 CCDC85AQ96PX6 553 aaPredicted RBP10.09□□□□□ -0.79
EPHA4-213ENST00000495693 SETDB2Q96T68 719 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 RNF41Q9H4P4 317 aaPredicted RBP10.09□□□□□ -0.79
EPHA4-213ENST00000495693 BSDC1Q9NW68 430 aaPredicted RBP10.09□□□□□ -0.79
EPHA4-213ENST00000495693 MTMR6Q9Y217 621 aa10.09□□□□□ -0.79
EPHA4-213ENST00000495693 PNPLA7Q6ZV29 1317 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 COL24A1Q17RW2 1714 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 GOLGA6L4A6NEF3 574 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 M0R2C6 588 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 IDH1O75874 414 aaKnown RBP10.08□□□□□ -0.8
EPHA4-213ENST00000495693 CPA1P15085 419 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 NASPP49321 788 aaPredicted RBP10.08□□□□□ -0.8
EPHA4-213ENST00000495693 EXOSC10Q01780 885 aaKnown RBP10.08□□□□□ -0.8
EPHA4-213ENST00000495693 SART3Q15020 963 aaKnown RBP10.08□□□□□ -0.8
EPHA4-213ENST00000495693 SLFNL1Q499Z3 407 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 KDF1Q8NAX2 398 aaPredicted RBP10.08□□□□□ -0.8
EPHA4-213ENST00000495693 SMARCC2Q8TAQ2 1214 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 BRF1Q92994 677 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 SEC62Q99442 399 aaKnown RBP10.08□□□□□ -0.8
EPHA4-213ENST00000495693 KRT23Q9C075 422 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 CYLDQ9NQC7 956 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 CCNL1Q9UK58 526 aaPredicted RBP10.08□□□□□ -0.8
EPHA4-213ENST00000495693 DENND2AQ9ULE3 1009 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 PCDHB11Q9Y5F2 797 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 KAT6BQ8WYB5 2073 aa10.08□□□□□ -0.8
EPHA4-213ENST00000495693 DOCK2Q92608 1830 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 PATL2C9JE40 543 aaKnown RBP10.07□□□□□ -0.8
EPHA4-213ENST00000495693 LARGE1O95461 756 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 XRCC6P12956 609 aaKnown RBP eCLIP10.07□□□□□ -0.8
EPHA4-213ENST00000495693 HCLS1P14317 486 aaPredicted RBP10.07□□□□□ -0.8
EPHA4-213ENST00000495693 PDE6AP16499 860 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 RCAN1P53805 252 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 C6orf118Q5T5N4 469 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 VPS37DQ86XT2 251 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 CERS3Q8IU89 383 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 TMTC2Q8N394 836 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 LINC00116Q8NCU8 138 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 ZNF396Q96N95 335 aaPredicted RBP10.07□□□□□ -0.8
EPHA4-213ENST00000495693 NAPBQ9H115 298 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 BTAF1O14981 1849 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 LY75O60449 1722 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 ZNF804BA4D1E1 1349 aa10.07□□□□□ -0.8
EPHA4-213ENST00000495693 DUOX1Q9NRD9 1551 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 LAMA4Q16363 1823 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 CPLX1O14810 134 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 FGAP02671 866 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 APPP05067 770 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 PTGIRP43119 386 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 PHKA1P46020 1223 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 CHRNDQ07001 517 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 PPP2R5BQ15173 497 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 UVSSAQ2YD98 709 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 MAP7D1Q3KQU3 841 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 SLC27A3Q5K4L6 730 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 SYNE3Q6ZMZ3 975 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 USP48Q86UV5 1035 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 NBPF5PQ86XG9 351 aaPredicted RBP10.06□□□□□ -0.8
EPHA4-213ENST00000495693 RNF135Q8IUD6 432 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 FAM43AQ8N2R8 423 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 GPT2Q8TD30 523 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 ZNF532Q9HCE3 1301 aa10.06□□□□□ -0.8
EPHA4-213ENST00000495693 AKAP11Q9UKA4 1901 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 ERICH2A1L162 156 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 NPHP1O15259 732 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 PRC1O43663 620 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 CAVIN2O95810 425 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 RFC4P35249 363 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 HS1BP3Q53T59 392 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 TRAPPC3LQ5T215 181 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 FOXD4L5Q5VV16 416 aaPredicted RBP10.05□□□□□ -0.8
EPHA4-213ENST00000495693 GIMAP6Q6P9H5 292 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 NECAB1Q8N987 351 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 FOXD4L4Q8WXT5 416 aaPredicted RBP10.05□□□□□ -0.8
EPHA4-213ENST00000495693 WASF1Q92558 559 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 AGBL1Q96MI9 1066 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 PUS7LQ9H0K6 701 aaKnown RBP10.05□□□□□ -0.8
EPHA4-213ENST00000495693 TSPY26PQ9H489 355 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 LRP2BPQ9P2M1 347 aa10.05□□□□□ -0.8
EPHA4-213ENST00000495693 ANGEL1Q9UNK9 670 aaKnown RBP10.05□□□□□ -0.8
EPHA4-213ENST00000495693 MYH14Q7Z406 1995 aaKnown RBP10.05□□□□□ -0.8
EPHA4-213ENST00000495693 TIAM2Q8IVF5 1701 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 CCDC196A0A1B0GTZ2 297 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 PTPDC1A2A3K4 754 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 FIBPO43427 364 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 KCNQ2O43526 872 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 SCTRP47872 440 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 SCRN1Q12765 414 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 STK3Q13188 491 aa10.04□□□□□ -0.8
EPHA4-213ENST00000495693 RASGRF1Q13972 1273 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms