RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 GAKO14976 1311 aa17.17■□□□□ 0.34
CHPF2-204ENST00000495645 TPM2P07951 284 aa17.17■□□□□ 0.34
CHPF2-204ENST00000495645 SF3A1Q15459 793 aaKnown RBP17.17■□□□□ 0.34
CHPF2-204ENST00000495645 CCAR1Q8IX12 1150 aaKnown RBP17.17■□□□□ 0.34
CHPF2-204ENST00000495645 DIS3L2Q8IYB7 885 aaKnown RBP17.17■□□□□ 0.34
CHPF2-204ENST00000495645 ZNF444Q8N0Y2 327 aaPredicted RBP17.17■□□□□ 0.34
CHPF2-204ENST00000495645 TBC1D22AQ8WUA7 517 aa17.17■□□□□ 0.34
CHPF2-204ENST00000495645 CLIC6Q96NY7 704 aa17.17■□□□□ 0.34
CHPF2-204ENST00000495645 RCOR1Q9UKL0 485 aa17.17■□□□□ 0.34
CHPF2-204ENST00000495645 ZNF500O60304 480 aaPredicted RBP17.16■□□□□ 0.34
CHPF2-204ENST00000495645 CDKL5O76039 1030 aa17.16■□□□□ 0.34
CHPF2-204ENST00000495645 CFAP45Q9UL16 551 aa17.16■□□□□ 0.34
CHPF2-204ENST00000495645 PPIP5K2O43314 1243 aa17.16■□□□□ 0.34
CHPF2-204ENST00000495645 GRIN1Q05586 938 aa17.16■□□□□ 0.34
CHPF2-204ENST00000495645 TMC4Q7Z404 712 aa17.16■□□□□ 0.34
CHPF2-204ENST00000495645 LINC00301Q8NCQ3 95 aa17.16■□□□□ 0.34
CHPF2-204ENST00000495645 PNMA1Q8ND90 353 aa17.16■□□□□ 0.34
CHPF2-204ENST00000495645 GPKOWQ92917 476 aaPredicted RBP eCLIP17.16■□□□□ 0.34
CHPF2-204ENST00000495645 SYAP1Q96A49 352 aaPredicted RBP17.16■□□□□ 0.34
CHPF2-204ENST00000495645 CCDC39Q9UFE4 941 aa17.16■□□□□ 0.34
CHPF2-204ENST00000495645 NRXN2Q9P2S2 1712 aa17.16■□□□□ 0.34
CHPF2-204ENST00000495645 ELP1O95163 1332 aa17.15■□□□□ 0.34
CHPF2-204ENST00000495645 SCN9AQ15858 1988 aa17.15■□□□□ 0.34
CHPF2-204ENST00000495645 CRKP46108 304 aa17.15■□□□□ 0.34
CHPF2-204ENST00000495645 DACT2Q5SW24 774 aa17.15■□□□□ 0.34
CHPF2-204ENST00000495645 EYA3Q99504 573 aa17.15■□□□□ 0.34
CHPF2-204ENST00000495645 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.15■□□□□ 0.34
CHPF2-204ENST00000495645 CCDC88AQ3V6T2 1871 aa17.15■□□□□ 0.34
CHPF2-204ENST00000495645 PSDA5PKW4 1024 aaPredicted RBP17.15■□□□□ 0.34
CHPF2-204ENST00000495645 SLC3A2P08195 630 aaKnown RBP17.15■□□□□ 0.34
CHPF2-204ENST00000495645 STK38Q15208 465 aa17.15■□□□□ 0.34
CHPF2-204ENST00000495645 STYK1Q6J9G0 422 aa17.15■□□□□ 0.34
CHPF2-204ENST00000495645 TRIM22Q8IYM9 498 aa17.15■□□□□ 0.34
CHPF2-204ENST00000495645 TMTC2Q8N394 836 aa17.15■□□□□ 0.34
CHPF2-204ENST00000495645 CEP95Q96GE4 821 aa17.15■□□□□ 0.34
CHPF2-204ENST00000495645 ADCY5O95622 1261 aa17.14■□□□□ 0.33
CHPF2-204ENST00000495645 TOB1P50616 345 aaPredicted RBP17.14■□□□□ 0.33
CHPF2-204ENST00000495645 HS1BP3Q53T59 392 aa17.14■□□□□ 0.33
CHPF2-204ENST00000495645 TMEM47Q9BQJ4 181 aa17.14■□□□□ 0.33
CHPF2-204ENST00000495645 AP5Z1O43299 807 aa17.14■□□□□ 0.33
CHPF2-204ENST00000495645 TRIM29Q14134 588 aa17.14■□□□□ 0.33
CHPF2-204ENST00000495645 USP17L2Q6R6M4 530 aa17.14■□□□□ 0.33
CHPF2-204ENST00000495645 FSIP1Q8NA03 581 aa17.14■□□□□ 0.33
CHPF2-204ENST00000495645 CNKSR1Q969H4 720 aa17.14■□□□□ 0.33
CHPF2-204ENST00000495645 FAM163AQ96GL9 167 aaPredicted RBP17.14■□□□□ 0.33
CHPF2-204ENST00000495645 LRRC37AA6NMS7 1700 aa17.14■□□□□ 0.33
CHPF2-204ENST00000495645 AKR1B1P15121 316 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 R3HDM1Q15032 1099 aaKnown RBP17.13■□□□□ 0.33
CHPF2-204ENST00000495645 CSPP1Q1MSJ5 1256 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 NUP62CLQ9H1M0 184 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 TDRD3Q9H7E2 651 aaKnown RBP17.13■□□□□ 0.33
CHPF2-204ENST00000495645 KAT14Q9H8E8 782 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 VAT1LQ9HCJ6 419 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 CABP5Q9NP86 173 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 MMP1P03956 469 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 NDUFA8P51970 172 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 DNTTIP2Q5QJE6 756 aaKnown RBP17.13■□□□□ 0.33
CHPF2-204ENST00000495645 ANO1Q5XXA6 986 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 TYW1BQ6NUM6 668 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 TMTC3Q6ZXV5 915 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 PODNQ7Z5L7 613 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 LRRC47Q8N1G4 583 aaKnown RBP17.13■□□□□ 0.33
CHPF2-204ENST00000495645 RASGRP4Q8TDF6 673 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 TEKT1Q969V4 418 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 KIAA1551Q9HCM1 1747 aa17.13■□□□□ 0.33
CHPF2-204ENST00000495645 SHTN1A0MZ66 631 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 DDTLA6NHG4 134 aaPredicted RBP17.12■□□□□ 0.33
CHPF2-204ENST00000495645 CYTH3O43739 400 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 ATP2B2Q01814 1243 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 SNW1Q13573 536 aaKnown RBP17.12■□□□□ 0.33
CHPF2-204ENST00000495645 ZNF396Q96N95 335 aaPredicted RBP17.12■□□□□ 0.33
CHPF2-204ENST00000495645 PCDHB6Q9Y5E3 794 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 DEXIO95424 95 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 TTLL6Q8N841 843 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 SPC24Q8NBT2 197 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 CTCFLQ8NI51 663 aaPredicted RBP17.12■□□□□ 0.33
CHPF2-204ENST00000495645 PRMT6Q96LA8 375 aaPredicted RBP17.12■□□□□ 0.33
CHPF2-204ENST00000495645 UBA5Q9GZZ9 404 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 TNMDQ9H2S6 317 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 RTEL1Q9NZ71 1219 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 SNED1Q8TER0 1413 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 SPTLC2O15270 562 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 RAD21O60216 631 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 C16orf86Q6ZW13 317 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 CDAN1Q8IWY9 1227 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 AMOTL1Q8IY63 956 aa17.12■□□□□ 0.33
CHPF2-204ENST00000495645 CNTNAP5Q8WYK1 1306 aa17.11■□□□□ 0.33
CHPF2-204ENST00000495645 CLRN2A0PK11 232 aa17.11■□□□□ 0.33
CHPF2-204ENST00000495645 AKAP17AQ02040 695 aaKnown RBP17.11■□□□□ 0.33
CHPF2-204ENST00000495645 HOMER1Q86YM7 354 aa17.11■□□□□ 0.33
CHPF2-204ENST00000495645 NOSTRINQ8IVI9 506 aa17.11■□□□□ 0.33
CHPF2-204ENST00000495645 FUCA2Q9BTY2 467 aa17.11■□□□□ 0.33
CHPF2-204ENST00000495645 FRMPD2Q68DX3 1309 aaPredicted RBP17.11■□□□□ 0.33
CHPF2-204ENST00000495645 CCDC196A0A1B0GTZ2 297 aa17.11■□□□□ 0.33
CHPF2-204ENST00000495645 PDIA4P13667 645 aaKnown RBP17.11■□□□□ 0.33
CHPF2-204ENST00000495645 ISM2Q6H9L7 571 aa17.11■□□□□ 0.33
CHPF2-204ENST00000495645 ZSCAN29Q8IWY8 852 aaPredicted RBP17.11■□□□□ 0.33
CHPF2-204ENST00000495645 DNAJC18Q9H819 358 aa17.11■□□□□ 0.33
CHPF2-204ENST00000495645 U2AF2P26368 475 aaKnown RBP eCLIP17.1■□□□□ 0.33
CHPF2-204ENST00000495645 KIAA2012Q0VF49 1180 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms