RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 TSPY8P0CW00 308 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 HSPA1AP0DMV8 641 aaKnown RBP11.16□□□□□ -0.62
ACTN4-207ENST00000495553 HSPA1BP0DMV9 641 aaKnown RBP11.16□□□□□ -0.62
ACTN4-207ENST00000495553 PTPRAP18433 802 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 CERKLQ49MI3 558 aaPredicted RBP11.16□□□□□ -0.62
ACTN4-207ENST00000495553 OTUD7BQ6GQQ9 843 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 TBC1D10CQ8IV04 446 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 TMTC2Q8N394 836 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 CHMP4CQ96CF2 233 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 TMEM87BQ96K49 555 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 MTA3Q9BTC8 594 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 ZSWIM6Q9HCJ5 1215 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 CABP5Q9NP86 173 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 GINM1Q9NU53 330 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 PDRG1Q9NUG6 133 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 CDK5RAP2Q96SN8 1893 aa11.16□□□□□ -0.62
ACTN4-207ENST00000495553 CCL15-CCL14A0A0B4J2E2 113 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 USP17L5A8MUK1 530 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 B4E1Z4 1266 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 MPHOSPH10O00566 681 aaKnown RBP11.15□□□□□ -0.62
ACTN4-207ENST00000495553 CXCL11O14625 94 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 PRC1O43663 620 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 KDM4AO75164 1064 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 CETPP11597 493 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 RPS6KB1P23443 525 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 SHMT1P34896 483 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 TM4SF4P48230 202 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 CDK8P49336 464 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 GABPAQ06546 454 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 RRP1BQ14684 758 aaKnown RBP11.15□□□□□ -0.62
ACTN4-207ENST00000495553 CCL15Q16663 113 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 ABCB5Q2M3G0 1257 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 TATDN1Q6P1N9 297 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 SYNE3Q6ZMZ3 975 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 HSCBQ8IWL3 235 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 DYNLL2Q96FJ2 89 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 TBC1D2Q9BYX2 928 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 UPF3BQ9BZI7 483 aaKnown RBP11.15□□□□□ -0.62
ACTN4-207ENST00000495553 AS3MTQ9HBK9 375 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 TSHZ2Q9NRE2 1034 aa11.15□□□□□ -0.62
ACTN4-207ENST00000495553 NEDD4P46934 1319 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 TRIM75PA6NK02 468 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 PRDM1O75626 825 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 TRPA1O75762 1119 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 ALDH1A1P00352 501 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 GH2P01242 217 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 FGRP09769 529 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 TFAP4Q01664 338 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 EVX2Q03828 476 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 RAB3GAP1Q15042 981 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 ADCK5Q3MIX3 580 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 NFXL1Q6ZNB6 911 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 SLC44A5Q8NCS7 719 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 MS4A4AQ96JQ5 239 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 NBPF3Q9H094 633 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 ZBTB21Q9ULJ3 1066 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 AFG3L2Q9Y4W6 797 aa11.14□□□□□ -0.63
ACTN4-207ENST00000495553 DDX60LQ5H9U9 1706 aaKnown RBP11.13□□□□□ -0.63
ACTN4-207ENST00000495553 TESPA1A2RU30 521 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-207ENST00000495553 IFIT3O14879 490 aaKnown RBP11.13□□□□□ -0.63
ACTN4-207ENST00000495553 CTCFP49711 727 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-207ENST00000495553 SPP2Q13103 211 aa11.13□□□□□ -0.63
ACTN4-207ENST00000495553 TMEM67Q5HYA8 995 aa11.13□□□□□ -0.63
ACTN4-207ENST00000495553 STOX1Q6ZVD7 989 aa11.13□□□□□ -0.63
ACTN4-207ENST00000495553 CCDC84Q86UT8 332 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-207ENST00000495553 IFNL1Q8IU54 200 aa11.13□□□□□ -0.63
ACTN4-207ENST00000495553 MB21D2Q8IYB1 491 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-207ENST00000495553 ZNF280CQ8ND82 737 aa11.13□□□□□ -0.63
ACTN4-207ENST00000495553 BRI3BPQ8WY22 251 aa11.13□□□□□ -0.63
ACTN4-207ENST00000495553 ZSCAN10Q96SZ4 725 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-207ENST00000495553 ALDH8A1Q9H2A2 487 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-207ENST00000495553 RNF186Q9NXI6 227 aa11.13□□□□□ -0.63
ACTN4-207ENST00000495553 SAGE1Q9NXZ1 904 aa11.13□□□□□ -0.63
ACTN4-207ENST00000495553 ZSWIM5Q9P217 1185 aa11.13□□□□□ -0.63
ACTN4-207ENST00000495553 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.13□□□□□ -0.63
ACTN4-207ENST00000495553 KCNH4Q9UQ05 1017 aa11.13□□□□□ -0.63
ACTN4-207ENST00000495553 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.13□□□□□ -0.63
ACTN4-207ENST00000495553 RBM19Q9Y4C8 960 aaKnown RBP11.13□□□□□ -0.63
ACTN4-207ENST00000495553 CCDC69A6NI79 296 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 SMIM22K7EJ46 135 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 FOXN1O15353 648 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 HSP90AA1P07900 732 aaKnown RBP11.12□□□□□ -0.63
ACTN4-207ENST00000495553 RASA1P20936 1047 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 JAG1P78504 1218 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 WTAPQ15007 396 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 SHROOM1Q2M3G4 852 aaPredicted RBP11.12□□□□□ -0.63
ACTN4-207ENST00000495553 IFIT1BQ5T764 474 aaKnown RBP11.12□□□□□ -0.63
ACTN4-207ENST00000495553 GADL1Q6ZQY3 521 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 TMEM179Q6ZVK1 233 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 FASTKD5Q7L8L6 764 aaKnown RBP11.12□□□□□ -0.63
ACTN4-207ENST00000495553 NEDD1Q8NHV4 660 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 ZSCAN31Q96LW9 406 aaPredicted RBP11.12□□□□□ -0.63
ACTN4-207ENST00000495553 KIF2CQ99661 725 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 WDR18Q9BV38 432 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 TCP11L1Q9NUJ3 509 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 NAP1L2Q9ULW6 460 aaPredicted RBP11.12□□□□□ -0.63
ACTN4-207ENST00000495553 TAF6LQ9Y6J9 622 aa11.12□□□□□ -0.63
ACTN4-207ENST00000495553 A0A0G2JLL6 359 aaPredicted RBP11.11□□□□□ -0.63
ACTN4-207ENST00000495553 IGF2BP3O00425 579 aaKnown RBP eCLIP11.11□□□□□ -0.63
ACTN4-207ENST00000495553 CALM1P0DP23 149 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 240.8 ms