RNA–Protein interactions for RNA: ENST00000495425.6

SLC47A1-204, Transcript of solute carrier family 47 member 1, humanhuman

TSL 2

Gene SLC47A1, Length 1,066 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1-204ENST00000495425 CRACR2BQ8N4Y2 399 aaPredicted RBP16.55■□□□□ 0.24
SLC47A1-204ENST00000495425 TRIM34Q9BYJ4 488 aa16.55■□□□□ 0.24
SLC47A1-204ENST00000495425 PDLIM7Q9NR12 457 aa16.55■□□□□ 0.24
SLC47A1-204ENST00000495425 RAI14Q9P0K7 980 aa16.55■□□□□ 0.24
SLC47A1-204ENST00000495425 IVNS1ABPQ9Y6Y0 642 aa16.55■□□□□ 0.24
SLC47A1-204ENST00000495425 USP17L15C9J2P7 530 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 USP17L13C9JLJ4 530 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 KBTBD13C9JR72 458 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 USP17L11C9JVI0 530 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 USP17L18D6R9N7 530 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 USP17L22D6RA61 530 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 USP17L17D6RBQ6 530 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 USP17L19D6RCP7 530 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 USP17L20D6RJB6 530 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 GDF11O95390 407 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 PPP4CP60510 307 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 USP17L24Q0WX57 530 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 TFCP2Q12800 502 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 SHROOM1Q2M3G4 852 aaPredicted RBP16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 OLFML2BQ68BL8 750 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 TBC1D9Q6ZT07 1266 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 TRPV1Q8NER1 839 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 BADQ92934 168 aa16.54■□□□□ 0.24
SLC47A1-204ENST00000495425 E9PSI1 815 aa16.53■□□□□ 0.24
SLC47A1-204ENST00000495425 TNFRSF10AO00220 468 aa16.53■□□□□ 0.24
SLC47A1-204ENST00000495425 CYP2C19P33261 490 aa16.53■□□□□ 0.24
SLC47A1-204ENST00000495425 USP14P54578 494 aa16.53■□□□□ 0.24
SLC47A1-204ENST00000495425 MTX1Q13505 466 aa16.53■□□□□ 0.24
SLC47A1-204ENST00000495425 TRIM60Q495X7 471 aa16.53■□□□□ 0.24
SLC47A1-204ENST00000495425 ATF7IPQ6VMQ6 1270 aa16.53■□□□□ 0.24
SLC47A1-204ENST00000495425 NPLOC4Q8TAT6 608 aa16.53■□□□□ 0.24
SLC47A1-204ENST00000495425 PRDM5Q9NQX1 630 aaPredicted RBP16.53■□□□□ 0.24
SLC47A1-204ENST00000495425 AATFQ9NY61 560 aaKnown RBP eCLIP16.53■□□□□ 0.24
SLC47A1-204ENST00000495425 LRP2BPQ9P2M1 347 aa16.53■□□□□ 0.24
SLC47A1-204ENST00000495425 SEPT4O43236 478 aa16.52■□□□□ 0.24
SLC47A1-204ENST00000495425 HLA-DOAP06340 250 aa16.52■□□□□ 0.24
SLC47A1-204ENST00000495425 MCAMP43121 646 aa16.52■□□□□ 0.24
SLC47A1-204ENST00000495425 GJC2Q5T442 439 aaPredicted RBP16.52■□□□□ 0.24
SLC47A1-204ENST00000495425 WDR78Q5VTH9 848 aa16.52■□□□□ 0.24
SLC47A1-204ENST00000495425 NAA16Q6N069 864 aaPredicted RBP16.52■□□□□ 0.24
SLC47A1-204ENST00000495425 CATSPERGQ6ZRH7 1159 aa16.52■□□□□ 0.24
SLC47A1-204ENST00000495425 MAPKAPK5Q8IW41 473 aa16.52■□□□□ 0.24
SLC47A1-204ENST00000495425 TRMT2AQ8IZ69 625 aaKnown RBP16.52■□□□□ 0.24
SLC47A1-204ENST00000495425 TGFBRAP1Q8WUH2 860 aa16.52■□□□□ 0.24
SLC47A1-204ENST00000495425 MYH1P12882 1939 aa16.52■□□□□ 0.23
SLC47A1-204ENST00000495425 UQCRFS1P1P0C7P4 283 aa16.51■□□□□ 0.23
SLC47A1-204ENST00000495425 VCAM1P19320 739 aa16.51■□□□□ 0.23
SLC47A1-204ENST00000495425 GORABQ5T7V8 394 aa16.51■□□□□ 0.23
SLC47A1-204ENST00000495425 NEUROD6Q96NK8 337 aa16.51■□□□□ 0.23
SLC47A1-204ENST00000495425 FEZ1Q99689 392 aa16.51■□□□□ 0.23
SLC47A1-204ENST00000495425 KIAA1683Q9H0B3 1180 aa16.51■□□□□ 0.23
SLC47A1-204ENST00000495425 BTBD7Q9P203 1132 aa16.51■□□□□ 0.23
SLC47A1-204ENST00000495425 PALD1Q9ULE6 856 aa16.51■□□□□ 0.23
SLC47A1-204ENST00000495425 NDUFB9Q9Y6M9 179 aa16.51■□□□□ 0.23
SLC47A1-204ENST00000495425 TRIM43BA6NCK2 446 aa16.5■□□□□ 0.23
SLC47A1-204ENST00000495425 SPDYE16A6NNV3 312 aaPredicted RBP16.5■□□□□ 0.23
SLC47A1-204ENST00000495425 STRNO43815 780 aa16.5■□□□□ 0.23
SLC47A1-204ENST00000495425 GH2P01242 217 aa16.5■□□□□ 0.23
SLC47A1-204ENST00000495425 TATDN1Q6P1N9 297 aa16.5■□□□□ 0.23
SLC47A1-204ENST00000495425 TRIM43Q96BQ3 446 aaPredicted RBP16.5■□□□□ 0.23
SLC47A1-204ENST00000495425 RNPC3Q96LT9 517 aaKnown RBP16.5■□□□□ 0.23
SLC47A1-204ENST00000495425 SMC4Q9NTJ3 1288 aa16.5■□□□□ 0.23
SLC47A1-204ENST00000495425 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.5■□□□□ 0.23
SLC47A1-204ENST00000495425 SRGAP3O43295 1099 aa16.49■□□□□ 0.23
SLC47A1-204ENST00000495425 SH3RF1Q7Z6J0 888 aa16.49■□□□□ 0.23
SLC47A1-204ENST00000495425 USP38Q8NB14 1042 aa16.49■□□□□ 0.23
SLC47A1-204ENST00000495425 MEIS3Q99687 375 aa16.49■□□□□ 0.23
SLC47A1-204ENST00000495425 EHD4Q9H223 541 aa16.49■□□□□ 0.23
SLC47A1-204ENST00000495425 MYO5AQ9Y4I1 1855 aaKnown RBP16.49■□□□□ 0.23
SLC47A1-204ENST00000495425 TACC3Q9Y6A5 838 aa16.49■□□□□ 0.23
SLC47A1-204ENST00000495425 ROBO3Q96MS0 1386 aa16.49■□□□□ 0.23
SLC47A1-204ENST00000495425 ADORA2AP29274 412 aa16.48■□□□□ 0.23
SLC47A1-204ENST00000495425 LRRC41Q15345 812 aa16.48■□□□□ 0.23
SLC47A1-204ENST00000495425 ZYXQ15942 572 aaKnown RBP16.48■□□□□ 0.23
SLC47A1-204ENST00000495425 ADGRA1Q86SQ6 560 aa16.48■□□□□ 0.23
SLC47A1-204ENST00000495425 DPP9Q86TI2 863 aa16.48■□□□□ 0.23
SLC47A1-204ENST00000495425 CERS3Q8IU89 383 aa16.48■□□□□ 0.23
SLC47A1-204ENST00000495425 SHCBP1Q8NEM2 672 aa16.48■□□□□ 0.23
SLC47A1-204ENST00000495425 API5Q9BZZ5 524 aaKnown RBP16.48■□□□□ 0.23
SLC47A1-204ENST00000495425 KIAA0355O15063 1070 aa16.47■□□□□ 0.23
SLC47A1-204ENST00000495425 CLTBP09497 229 aa16.47■□□□□ 0.23
SLC47A1-204ENST00000495425 DNAJB2P25686 324 aa16.47■□□□□ 0.23
SLC47A1-204ENST00000495425 GRIN2CQ14957 1233 aa16.47■□□□□ 0.23
SLC47A1-204ENST00000495425 PHF24Q9UPV7 400 aa16.47■□□□□ 0.23
SLC47A1-204ENST00000495425 GNAI3P08754 354 aa16.46■□□□□ 0.23
SLC47A1-204ENST00000495425 ITGB8P26012 769 aa16.46■□□□□ 0.23
SLC47A1-204ENST00000495425 PLA2G5P39877 138 aa16.46■□□□□ 0.23
SLC47A1-204ENST00000495425 ADCYAP1R1P41586 468 aa16.46■□□□□ 0.23
SLC47A1-204ENST00000495425 ABRAQ8N0Z2 381 aa16.46■□□□□ 0.23
SLC47A1-204ENST00000495425 ATXN2LQ8WWM7 1075 aaKnown RBP16.46■□□□□ 0.23
SLC47A1-204ENST00000495425 RPAP3Q9H6T3 665 aaPredicted RBP16.46■□□□□ 0.23
SLC47A1-204ENST00000495425 SLC5A4Q9NY91 659 aa16.46■□□□□ 0.23
SLC47A1-204ENST00000495425 NRBP1Q9UHY1 535 aa16.46■□□□□ 0.23
SLC47A1-204ENST00000495425 SERPINB13Q9UIV8 391 aa16.46■□□□□ 0.23
SLC47A1-204ENST00000495425 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.45■□□□□ 0.22
SLC47A1-204ENST00000495425 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.45■□□□□ 0.22
SLC47A1-204ENST00000495425 CT47B1P0C2W7 299 aaPredicted RBP16.45■□□□□ 0.22
SLC47A1-204ENST00000495425 EPHB4P54760 987 aa16.45■□□□□ 0.22
SLC47A1-204ENST00000495425 TLE2Q04725 743 aa16.45■□□□□ 0.22
SLC47A1-204ENST00000495425 FAM47AQ5JRC9 791 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms