RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 PPP1R12BO60237 982 aaPredicted RBP18.96■□□□□ 0.63
CBX4-204ENST00000495122 CTDNEP1O95476 244 aa18.96■□□□□ 0.63
CBX4-204ENST00000495122 PPARAQ07869 468 aa18.96■□□□□ 0.63
CBX4-204ENST00000495122 SREBF2Q12772 1141 aa18.96■□□□□ 0.63
CBX4-204ENST00000495122 PPP2R5BQ15173 497 aa18.96■□□□□ 0.63
CBX4-204ENST00000495122 CAVIN1Q6NZI2 390 aaKnown RBP18.96■□□□□ 0.63
CBX4-204ENST00000495122 CLMNQ96JQ2 1002 aa18.96■□□□□ 0.63
CBX4-204ENST00000495122 ATAD5Q96QE3 1844 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 UNCXA6NJT0 531 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 JAK2O60674 1132 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 LDHCP07864 332 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 FGRP09769 529 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 MECOMQ03112 1051 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 ZSCAN23Q3MJ62 389 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 WNK4Q96J92 1243 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 TEPSINQ96N21 525 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 CFAP45Q9UL16 551 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 CNPY2Q9Y2B0 182 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 NEDD4P46934 1319 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 FOCADQ5VW36 1801 aa18.95■□□□□ 0.62
CBX4-204ENST00000495122 TCHHQ07283 1943 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 ERICH2A1L162 156 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 B4E1Z4 1266 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 CPLX1O14810 134 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 USP2O75604 605 aaPredicted RBP18.94■□□□□ 0.62
CBX4-204ENST00000495122 SLC3A2P08195 630 aaKnown RBP18.94■□□□□ 0.62
CBX4-204ENST00000495122 RESTQ13127 1097 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 SBK1Q52WX2 424 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 SYNE3Q6ZMZ3 975 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 CYB5R4Q7L1T6 521 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 CDAN1Q8IWY9 1227 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 MIGA1Q8NAN2 632 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 IGDCC4Q8TDY8 1250 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 ESR2Q92731 530 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 TEKT1Q969V4 418 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 CFHR5Q9BXR6 569 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 HPS5Q9UPZ3 1129 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 SUGT1Q9Y2Z0 365 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 MYH15Q9Y2K3 1946 aa18.94■□□□□ 0.62
CBX4-204ENST00000495122 PHIPQ8WWQ0 1821 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 DOCK1Q14185 1865 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 TBC1D8O95759 1140 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 LDHBP07195 334 aaKnown RBP18.93■□□□□ 0.62
CBX4-204ENST00000495122 ZBTB48P10074 688 aaPredicted RBP18.93■□□□□ 0.62
CBX4-204ENST00000495122 IREB2P48200 963 aaKnown RBP18.93■□□□□ 0.62
CBX4-204ENST00000495122 DNM1Q05193 864 aaKnown RBP18.93■□□□□ 0.62
CBX4-204ENST00000495122 TMEM67Q5HYA8 995 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 APOA5Q6Q788 366 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 CHST3Q7LGC8 479 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 ADGRA1Q86SQ6 560 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 DZIP1Q86YF9 867 aaKnown RBP18.93■□□□□ 0.62
CBX4-204ENST00000495122 SLF2Q8IX21 1173 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 SLC10A4Q96EP9 437 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 ZDHHC15Q96MV8 337 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 GRPEL1Q9HAV7 217 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 LY9Q9HBG7 655 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 ARPP21Q9UBL0 812 aaPredicted RBP18.93■□□□□ 0.62
CBX4-204ENST00000495122 BRPF3Q9ULD4 1205 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 STK36Q9NRP7 1315 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 ZSWIM8A7E2V4 1837 aa18.93■□□□□ 0.62
CBX4-204ENST00000495122 MANSC4A6NHS7 340 aaPredicted RBP18.92■□□□□ 0.62
CBX4-204ENST00000495122 TCP10L2B9ZVM9 353 aa18.92■□□□□ 0.62
CBX4-204ENST00000495122 ZBTB43O43298 467 aa18.92■□□□□ 0.62
CBX4-204ENST00000495122 PRKAB2O43741 272 aa18.92■□□□□ 0.62
CBX4-204ENST00000495122 METAP2P50579 478 aaKnown RBP eCLIP18.92■□□□□ 0.62
CBX4-204ENST00000495122 PPP4CP60510 307 aa18.92■□□□□ 0.62
CBX4-204ENST00000495122 CCT2P78371 535 aaKnown RBP18.92■□□□□ 0.62
CBX4-204ENST00000495122 NOM1Q5C9Z4 860 aaKnown RBP18.92■□□□□ 0.62
CBX4-204ENST00000495122 CTU1Q7Z7A3 348 aaKnown RBP18.92■□□□□ 0.62
CBX4-204ENST00000495122 ANKRD13AQ8IZ07 590 aa18.92■□□□□ 0.62
CBX4-204ENST00000495122 ZNF396Q96N95 335 aaPredicted RBP18.92■□□□□ 0.62
CBX4-204ENST00000495122 NOL10Q9BSC4 688 aaKnown RBP18.92■□□□□ 0.62
CBX4-204ENST00000495122 MRIQ9BWK5 157 aa18.92■□□□□ 0.62
CBX4-204ENST00000495122 NAP1L2Q9ULW6 460 aaPredicted RBP18.92■□□□□ 0.62
CBX4-204ENST00000495122 CCDC196A0A1B0GTZ2 297 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 CCDC69A6NI79 296 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 IFIT3O14879 490 aaKnown RBP18.91■□□□□ 0.62
CBX4-204ENST00000495122 ORC4O43929 436 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 KDM4AO75164 1064 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 BAG3O95817 575 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 GJA5P36382 358 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 TNNI2P48788 182 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 CCDC183Q5T5S1 534 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 LRSAM1Q6UWE0 723 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 ZNF384Q8TF68 577 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 ZNF296Q8WUU4 475 aaPredicted RBP18.91■□□□□ 0.62
CBX4-204ENST00000495122 WASF1Q92558 559 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 TMEM39BQ9GZU3 492 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 ZSWIM5Q9P217 1185 aa18.91■□□□□ 0.62
CBX4-204ENST00000495122 MGAMO43451 1857 aa18.9■□□□□ 0.62
CBX4-204ENST00000495122 FIBPO43427 364 aa18.9■□□□□ 0.62
CBX4-204ENST00000495122 RGS19P49795 217 aa18.9■□□□□ 0.62
CBX4-204ENST00000495122 CTDSPL2Q05D32 466 aa18.9■□□□□ 0.62
CBX4-204ENST00000495122 HHIPL2Q6UWX4 724 aa18.9■□□□□ 0.62
CBX4-204ENST00000495122 NFXL1Q6ZNB6 911 aa18.9■□□□□ 0.62
CBX4-204ENST00000495122 BRAPQ7Z569 592 aa18.9■□□□□ 0.62
CBX4-204ENST00000495122 DDX11Q96FC9 970 aa18.9■□□□□ 0.62
CBX4-204ENST00000495122 NCOA5Q9HCD5 579 aaKnown RBP18.9■□□□□ 0.62
CBX4-204ENST00000495122 TMEM63CQ9P1W3 806 aa18.9■□□□□ 0.62
CBX4-204ENST00000495122 SLC12A7Q9Y666 1083 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms