RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 AKR1B1P15121 316 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 PDCP20941 246 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 EPS15P42566 896 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 RASA3Q14644 834 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 RTN1Q16799 776 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 CERKLQ49MI3 558 aaPredicted RBP12.88□□□□□ -0.35
PKP4-215ENST00000494945 TRPM4Q8TD43 1214 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 MAP3K14Q99558 947 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 TMEM39BQ9GZU3 492 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 KAT14Q9H8E8 782 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 NCOA5Q9HCD5 579 aaKnown RBP12.88□□□□□ -0.35
PKP4-215ENST00000494945 KIF3AQ9Y496 699 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 PARP14Q460N5 1801 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 PITPNM2Q9BZ72 1349 aa12.88□□□□□ -0.35
PKP4-215ENST00000494945 PTPDC1A2A3K4 754 aa12.87□□□□□ -0.35
PKP4-215ENST00000494945 CTDNEP1O95476 244 aa12.87□□□□□ -0.35
PKP4-215ENST00000494945 TOP1P11387 765 aaKnown RBP12.87□□□□□ -0.35
PKP4-215ENST00000494945 MAP3K10Q02779 954 aa12.87□□□□□ -0.35
PKP4-215ENST00000494945 TROAPQ12815 778 aa12.87□□□□□ -0.35
PKP4-215ENST00000494945 FANCBQ8NB91 859 aa12.87□□□□□ -0.35
PKP4-215ENST00000494945 CEP95Q96GE4 821 aa12.87□□□□□ -0.35
PKP4-215ENST00000494945 TEPSINQ96N21 525 aa12.87□□□□□ -0.35
PKP4-215ENST00000494945 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.87□□□□□ -0.35
PKP4-215ENST00000494945 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.87□□□□□ -0.35
PKP4-215ENST00000494945 RBM28Q9NW13 759 aaKnown RBP12.87□□□□□ -0.35
PKP4-215ENST00000494945 MTMR4Q9NYA4 1195 aa12.87□□□□□ -0.35
PKP4-215ENST00000494945 PPP2R3BQ9Y5P8 575 aa12.87□□□□□ -0.35
PKP4-215ENST00000494945 GLTPD2A6NH11 291 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 JAK2O60674 1132 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 RAB3GAP1Q15042 981 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 ANGEL2Q5VTE6 544 aaKnown RBP12.86□□□□□ -0.35
PKP4-215ENST00000494945 TMEM179Q6ZVK1 233 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 RAB11FIP4Q86YS3 637 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 PNMA1Q8ND90 353 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 CTCFLQ8NI51 663 aaPredicted RBP12.86□□□□□ -0.35
PKP4-215ENST00000494945 NUP133Q8WUM0 1156 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 HOOK2Q96ED9 719 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 TMEM47Q9BQJ4 181 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 MYL10Q9BUA6 226 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 DEFB129Q9H1M3 183 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 FAM217BQ9NTX9 383 aaPredicted RBP12.86□□□□□ -0.35
PKP4-215ENST00000494945 STX8Q9UNK0 236 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 ASTN2O75129 1339 aaPredicted RBP12.86□□□□□ -0.35
PKP4-215ENST00000494945 WDR33Q9C0J8 1336 aaKnown RBP12.86□□□□□ -0.35
PKP4-215ENST00000494945 STK36Q9NRP7 1315 aa12.86□□□□□ -0.35
PKP4-215ENST00000494945 MPHOSPH10O00566 681 aaKnown RBP12.85□□□□□ -0.35
PKP4-215ENST00000494945 TTLL1O95922 423 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 IFNAR1P17181 557 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 RXRAP19793 462 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 SYT1P21579 422 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 CDC27P30260 824 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 KIF5BP33176 963 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 ADD1P35611 737 aaKnown RBP12.85□□□□□ -0.35
PKP4-215ENST00000494945 HIRAP54198 1017 aaPredicted RBP12.85□□□□□ -0.35
PKP4-215ENST00000494945 NTRK3Q16288 839 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 ABCB5Q2M3G0 1257 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 CCDC144CPQ8IYA2 1237 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 FAM184AQ8NB25 1140 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 RGS22Q8NE09 1264 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 CABP5Q9NP86 173 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 GGA3Q9NZ52 723 aa12.85□□□□□ -0.35
PKP4-215ENST00000494945 STX6O43752 255 aa12.84□□□□□ -0.35
PKP4-215ENST00000494945 BRD1O95696 1058 aa12.84□□□□□ -0.35
PKP4-215ENST00000494945 SLURP2P0DP57 97 aa12.84□□□□□ -0.35
PKP4-215ENST00000494945 GRM4Q14833 912 aa12.84□□□□□ -0.35
PKP4-215ENST00000494945 LARP1BQ659C4 914 aaKnown RBP12.84□□□□□ -0.35
PKP4-215ENST00000494945 USP50Q70EL3 339 aaPredicted RBP12.84□□□□□ -0.35
PKP4-215ENST00000494945 DDX11Q96FC9 970 aa12.84□□□□□ -0.35
PKP4-215ENST00000494945 KANSL2Q9H9L4 492 aa12.84□□□□□ -0.35
PKP4-215ENST00000494945 GINM1Q9NU53 330 aa12.84□□□□□ -0.35
PKP4-215ENST00000494945 NYAP2Q9P242 653 aa12.84□□□□□ -0.35
PKP4-215ENST00000494945 IQCA1LA6NCM1 817 aa12.83□□□□□ -0.36
PKP4-215ENST00000494945 FMNL1O95466 1100 aaPredicted RBP12.83□□□□□ -0.36
PKP4-215ENST00000494945 GNAQP50148 359 aa12.83□□□□□ -0.36
PKP4-215ENST00000494945 SSRP1Q08945 709 aaKnown RBP12.83□□□□□ -0.36
PKP4-215ENST00000494945 DCAF15Q66K64 600 aa12.83□□□□□ -0.36
PKP4-215ENST00000494945 CDAN1Q8IWY9 1227 aa12.83□□□□□ -0.36
PKP4-215ENST00000494945 TRIM22Q8IYM9 498 aa12.83□□□□□ -0.36
PKP4-215ENST00000494945 ZC3H15Q8WU90 426 aaKnown RBP12.83□□□□□ -0.36
PKP4-215ENST00000494945 MKL1Q969V6 931 aa12.83□□□□□ -0.36
PKP4-215ENST00000494945 ORC3Q9UBD5 711 aaPredicted RBP12.83□□□□□ -0.36
PKP4-215ENST00000494945 SYNPO2Q9UMS6 1093 aa12.83□□□□□ -0.36
PKP4-215ENST00000494945 DCAF8L1A6NGE4 600 aa12.82□□□□□ -0.36
PKP4-215ENST00000494945 GDF11O95390 407 aa12.82□□□□□ -0.36
PKP4-215ENST00000494945 GH2P01242 217 aa12.82□□□□□ -0.36
PKP4-215ENST00000494945 ZSCAN22P10073 491 aaPredicted RBP12.82□□□□□ -0.36
PKP4-215ENST00000494945 FDPSP14324 419 aaKnown RBP12.82□□□□□ -0.36
PKP4-215ENST00000494945 GUCY1A2P33402 732 aa12.82□□□□□ -0.36
PKP4-215ENST00000494945 EPHX2P34913 555 aa12.82□□□□□ -0.36
PKP4-215ENST00000494945 PKP1Q13835 747 aa12.82□□□□□ -0.36
PKP4-215ENST00000494945 SEPT2Q15019 361 aa12.82□□□□□ -0.36
PKP4-215ENST00000494945 TMTC3Q6ZXV5 915 aa12.82□□□□□ -0.36
PKP4-215ENST00000494945 NBPF11Q86T75 865 aa12.82□□□□□ -0.36
PKP4-215ENST00000494945 WASF1Q92558 559 aa12.82□□□□□ -0.36
PKP4-215ENST00000494945 TNPO1Q92973 898 aaKnown RBP12.82□□□□□ -0.36
PKP4-215ENST00000494945 LZTS2Q9BRK4 669 aa12.82□□□□□ -0.36
PKP4-215ENST00000494945 RNF26Q9BY78 433 aaPredicted RBP12.82□□□□□ -0.36
PKP4-215ENST00000494945 CLIP2Q9UDT6 1046 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms