RNA–Protein interactions for RNA: ENST00000494942.5

UBXN11-215, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,325 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-215ENST00000494942 HSP90AA4PQ58FG1 418 aa16.96■□□□□ 0.3
UBXN11-215ENST00000494942 CATIPQ7Z7H3 387 aa16.96■□□□□ 0.3
UBXN11-215ENST00000494942 TRMT44Q8IYL2 757 aaKnown RBP16.96■□□□□ 0.3
UBXN11-215ENST00000494942 GRAMD1CQ8IYS0 662 aa16.96■□□□□ 0.3
UBXN11-215ENST00000494942 ZSCAN10Q96SZ4 725 aaPredicted RBP16.96■□□□□ 0.3
UBXN11-215ENST00000494942 BRMS1Q9HCU9 246 aa16.96■□□□□ 0.3
UBXN11-215ENST00000494942 ZNF804BA4D1E1 1349 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 AFF2P51816 1311 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 BCL9LQ86UU0 1499 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 TADA3O75528 432 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 CAMTA2O94983 1202 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 SPATA1Q5VX52 437 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 ZNF771Q7L3S4 317 aaPredicted RBP16.95■□□□□ 0.3
UBXN11-215ENST00000494942 FNBP4Q8N3X1 1017 aaPredicted RBP16.95■□□□□ 0.3
UBXN11-215ENST00000494942 PANX2Q96RD6 677 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 SAMSN1Q9NSI8 373 aaKnown RBP16.95■□□□□ 0.3
UBXN11-215ENST00000494942 NTSR2O95665 410 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 TERF2Q15554 542 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 PKN1Q16512 942 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 PTPN21Q16825 1174 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 USP49Q70CQ1 688 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 ENAHQ8N8S7 591 aaPredicted RBP16.95■□□□□ 0.3
UBXN11-215ENST00000494942 SDR42E1Q8WUS8 393 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 DHX58Q96C10 678 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 GSDMAQ96QA5 445 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 MED15Q96RN5 788 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 CTAGE1Q96RT6 745 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 BRIP1Q9BX63 1249 aa16.95■□□□□ 0.3
UBXN11-215ENST00000494942 SEMA3EO15041 775 aa16.94■□□□□ 0.3
UBXN11-215ENST00000494942 FANCGO15287 622 aa16.94■□□□□ 0.3
UBXN11-215ENST00000494942 CRKLP46109 303 aaKnown RBP16.94■□□□□ 0.3
UBXN11-215ENST00000494942 ADKP55263 362 aaKnown RBP16.94■□□□□ 0.3
UBXN11-215ENST00000494942 GNG11P61952 73 aa16.94■□□□□ 0.3
UBXN11-215ENST00000494942 FUT2Q10981 343 aa16.94■□□□□ 0.3
UBXN11-215ENST00000494942 IFIT1BQ5T764 474 aaKnown RBP16.94■□□□□ 0.3
UBXN11-215ENST00000494942 SH3RF1Q7Z6J0 888 aa16.94■□□□□ 0.3
UBXN11-215ENST00000494942 ADGRA1Q86SQ6 560 aa16.94■□□□□ 0.3
UBXN11-215ENST00000494942 IQCA1Q86XH1 822 aa16.94■□□□□ 0.3
UBXN11-215ENST00000494942 CREBRFQ8IUR6 639 aa16.94■□□□□ 0.3
UBXN11-215ENST00000494942 NAA15Q9BXJ9 866 aaKnown RBP16.94■□□□□ 0.3
UBXN11-215ENST00000494942 VPS54Q9P1Q0 977 aa16.94■□□□□ 0.3
UBXN11-215ENST00000494942 ABCF2Q9UG63 623 aa16.94■□□□□ 0.3
UBXN11-215ENST00000494942 AKR1B15C9JRZ8 316 aaPredicted RBP16.93■□□□□ 0.3
UBXN11-215ENST00000494942 MAP3K9P80192 1104 aa16.93■□□□□ 0.3
UBXN11-215ENST00000494942 TMCO3Q6UWJ1 677 aa16.93■□□□□ 0.3
UBXN11-215ENST00000494942 PAGE5Q96GU1 130 aa16.93■□□□□ 0.3
UBXN11-215ENST00000494942 RIOK1Q9BRS2 568 aaKnown RBP16.93■□□□□ 0.3
UBXN11-215ENST00000494942 CARD6Q9BX69 1037 aa16.93■□□□□ 0.3
UBXN11-215ENST00000494942 USP21Q9UK80 565 aa16.93■□□□□ 0.3
UBXN11-215ENST00000494942 NIP7Q9Y221 180 aaKnown RBP eCLIP16.93■□□□□ 0.3
UBXN11-215ENST00000494942 DOT1LQ8TEK3 1739 aa16.93■□□□□ 0.3
UBXN11-215ENST00000494942 TOGARAM2Q6ZUX3 1019 aa16.93■□□□□ 0.3
UBXN11-215ENST00000494942 FHOD1Q9Y613 1164 aa16.93■□□□□ 0.3
UBXN11-215ENST00000494942 DUOX1Q9NRD9 1551 aa16.93■□□□□ 0.3
UBXN11-215ENST00000494942 ATP8B1O43520 1251 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 DDAH1O94760 285 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 FGRP09769 529 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 UBE4AQ14139 1066 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 EPSTI1Q96J88 318 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 SYNRGQ9UMZ2 1314 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 IGSF3O75054 1194 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 CCDC175P0C221 793 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 ATP6V1AP38606 617 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 CUL4BQ13620 913 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 PPFIBP1Q86W92 1011 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 FAM177A1Q8N128 213 aaPredicted RBP16.92■□□□□ 0.3
UBXN11-215ENST00000494942 SYMPKQ92797 1274 aaKnown RBP16.92■□□□□ 0.3
UBXN11-215ENST00000494942 SHISA4Q96DD7 197 aa16.92■□□□□ 0.3
UBXN11-215ENST00000494942 PYM1Q9BRP8 204 aaKnown RBP16.92■□□□□ 0.3
UBXN11-215ENST00000494942 CDCA7Q9BWT1 371 aaPredicted RBP16.92■□□□□ 0.3
UBXN11-215ENST00000494942 V9GY48 417 aaPredicted RBP16.92■□□□□ 0.3
UBXN11-215ENST00000494942 RREB1Q92766 1687 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 A0A087X0B3 334 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 ZRANB2O95218 330 aaKnown RBP eCLIP16.91■□□□□ 0.3
UBXN11-215ENST00000494942 DPYDQ12882 1025 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 FILIP1LQ4L180 1135 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 MRFAP1Q9Y605 127 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 WNK3Q9BYP7 1800 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 PNMA6AP0CW24 399 aaPredicted RBP16.91■□□□□ 0.3
UBXN11-215ENST00000494942 AFMP43652 599 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 TROAPQ12815 778 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 CAVIN4Q5BKX8 364 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 CDKAL1Q5VV42 579 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 APTXQ7Z2E3 356 aaKnown RBP16.91■□□□□ 0.3
UBXN11-215ENST00000494942 GPR161Q8N6U8 529 aaKnown RBP16.91■□□□□ 0.3
UBXN11-215ENST00000494942 WDR24Q96S15 920 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 ZNF652Q9Y2D9 606 aa16.91■□□□□ 0.3
UBXN11-215ENST00000494942 DLEC1Q9Y238 1755 aa16.9■□□□□ 0.3
UBXN11-215ENST00000494942 FAM205CA6NFA0 338 aa16.9■□□□□ 0.3
UBXN11-215ENST00000494942 ANKRD18AQ8IVF6 992 aa16.9■□□□□ 0.3
UBXN11-215ENST00000494942 TNFRSF25Q93038 417 aa16.9■□□□□ 0.3
UBXN11-215ENST00000494942 ADD3Q9UEY8 706 aaKnown RBP16.9■□□□□ 0.3
UBXN11-215ENST00000494942 IQSEC3Q9UPP2 1182 aaPredicted RBP16.9■□□□□ 0.3
UBXN11-215ENST00000494942 CICQ96RK0 1608 aaPredicted RBP16.9■□□□□ 0.3
UBXN11-215ENST00000494942 CACNA1SQ13698 1873 aa16.9■□□□□ 0.3
UBXN11-215ENST00000494942 TRAPPC10P48553 1259 aa16.9■□□□□ 0.3
UBXN11-215ENST00000494942 EARS2Q5JPH6 523 aaKnown RBP16.9■□□□□ 0.3
UBXN11-215ENST00000494942 TTC38Q5R3I4 469 aa16.9■□□□□ 0.3
UBXN11-215ENST00000494942 TMTC3Q6ZXV5 915 aa16.9■□□□□ 0.3
UBXN11-215ENST00000494942 IGSF22Q8N9C0 903 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms