RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 ZAP70P43403 619 aa14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 PLEKHH3Q7Z736 793 aa14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 MIGA1Q8NAN2 632 aa14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 ACER1Q8TDN7 264 aa14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 GUCD1Q96NT3 240 aa14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 COL25A1Q9BXS0 654 aaPredicted RBP14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 TBC1D2Q9BYX2 928 aa14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 SENP6Q9GZR1 1112 aaPredicted RBP14.31□□□□□ -0.12
CSNK1E-212ENST00000494610 MAST2Q6P0Q8 1798 aa14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 HMMRO75330 724 aa14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 MAPK4P31152 587 aa14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 PPP4CP60510 307 aa14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 TTC39AQ5SRH9 613 aa14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 WDR78Q5VTH9 848 aa14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 ANO1Q5XXA6 986 aa14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 METTL16Q86W50 562 aaKnown RBP14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 CCAR1Q8IX12 1150 aaKnown RBP14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 TRPV1Q8NER1 839 aa14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 SOCS4Q8WXH5 440 aa14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 NOL10Q9BSC4 688 aaKnown RBP14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 DHX36Q9H2U1 1008 aaKnown RBP14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 RWDD1Q9H446 243 aaPredicted RBP14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 C1orf115Q9H7X2 142 aa14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 BTBD7Q9P203 1132 aa14.3□□□□□ -0.12
CSNK1E-212ENST00000494610 MYH1P12882 1939 aa14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 C19orf81C9J6K1 198 aa14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 MAP4K4O95819 1239 aaPredicted RBP14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 CYP2C19P33261 490 aa14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 RGS2P41220 211 aa14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 TNNI3KQ59H18 835 aa14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 GPR153Q6NV75 609 aa14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 FOXP4Q8IVH2 680 aaPredicted RBP14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 RPAP2Q8IXW5 612 aaPredicted RBP14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 NPLOC4Q8TAT6 608 aa14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 TRIM34Q9BYJ4 488 aa14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 FPGT-TNNI3KV9GXZ4 949 aa14.29□□□□□ -0.12
CSNK1E-212ENST00000494610 BAG3O95817 575 aa14.28□□□□□ -0.12
CSNK1E-212ENST00000494610 UQCRFS1P1P0C7P4 283 aa14.28□□□□□ -0.12
CSNK1E-212ENST00000494610 CNGA1P29973 690 aa14.28□□□□□ -0.12
CSNK1E-212ENST00000494610 MUC3AQ02505 3323 aa14.28□□□□□ -0.12
CSNK1E-212ENST00000494610 MAP2K5Q13163 448 aa14.28□□□□□ -0.12
CSNK1E-212ENST00000494610 USP17L2Q6R6M4 530 aa14.28□□□□□ -0.12
CSNK1E-212ENST00000494610 CENPQQ7L2Z9 268 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-212ENST00000494610 EDC3Q96F86 508 aaKnown RBP14.28□□□□□ -0.12
CSNK1E-212ENST00000494610 APBA2Q99767 749 aa14.28□□□□□ -0.12
CSNK1E-212ENST00000494610 CCDC8Q9H0W5 538 aaPredicted RBP14.28□□□□□ -0.12
CSNK1E-212ENST00000494610 POTEB2H3BUK9 544 aa14.27□□□□□ -0.13
CSNK1E-212ENST00000494610 CYP7A1P22680 504 aa14.27□□□□□ -0.13
CSNK1E-212ENST00000494610 HDAC1Q13547 482 aaPredicted RBP14.27□□□□□ -0.13
CSNK1E-212ENST00000494610 RAB3GAP1Q15042 981 aa14.27□□□□□ -0.13
CSNK1E-212ENST00000494610 GJC2Q5T442 439 aaPredicted RBP14.27□□□□□ -0.13
CSNK1E-212ENST00000494610 ANTXR1Q9H6X2 564 aa14.27□□□□□ -0.13
CSNK1E-212ENST00000494610 CWC22Q9HCG8 908 aaKnown RBP14.27□□□□□ -0.13
CSNK1E-212ENST00000494610 DBNLQ9UJU6 430 aaKnown RBP14.27□□□□□ -0.13
CSNK1E-212ENST00000494610 VCAM1P19320 739 aa14.26□□□□□ -0.13
CSNK1E-212ENST00000494610 PTPREP23469 700 aa14.26□□□□□ -0.13
CSNK1E-212ENST00000494610 GUCY1A2P33402 732 aa14.26□□□□□ -0.13
CSNK1E-212ENST00000494610 CATSPERGQ6ZRH7 1159 aa14.26□□□□□ -0.13
CSNK1E-212ENST00000494610 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.26□□□□□ -0.13
CSNK1E-212ENST00000494610 FEZ1Q99689 392 aa14.26□□□□□ -0.13
CSNK1E-212ENST00000494610 LTBP2Q14767 1821 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 USP17L15C9J2P7 530 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 USP17L13C9JLJ4 530 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 USP17L11C9JVI0 530 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 USP17L18D6R9N7 530 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 USP17L22D6RA61 530 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 USP17L17D6RBQ6 530 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 USP17L19D6RCP7 530 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 USP17L20D6RJB6 530 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 IDH1O75874 414 aaKnown RBP14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 MYCNP04198 464 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 PLCD1P51178 756 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 USP17L24Q0WX57 530 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 OS9Q13438 667 aaPredicted RBP14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 POLA2Q14181 598 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 CCDC158Q5M9N0 1113 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 PRAMEF19Q5SWL8 479 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 C9orf50Q5SZB4 431 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 TATDN1Q6P1N9 297 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 MAGEB6Q8N7X4 407 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 DDX20Q9UHI6 824 aaKnown RBP14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 ATP11BQ9Y2G3 1177 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 RABGAP1Q9Y3P9 1069 aa14.25□□□□□ -0.13
CSNK1E-212ENST00000494610 SPDYE16A6NNV3 312 aaPredicted RBP14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 SURF6O75683 361 aaKnown RBP14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 HLA-DOAP06340 250 aa14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 PLCG2P16885 1265 aa14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 SHMT1P34896 483 aa14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 USP5P45974 858 aa14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 RTP1P59025 263 aa14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 ATP2B2Q01814 1243 aa14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 SHHQ15465 462 aa14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 KIAA1755Q5JYT7 1200 aa14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 MFSD14CQ5VZR4 134 aa14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 B4GALNT3Q6L9W6 998 aa14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 CEP85Q6P2H3 762 aa14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 TRMT44Q8IYL2 757 aaKnown RBP14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 EAF2Q96CJ1 260 aaPredicted RBP14.24□□□□□ -0.13
CSNK1E-212ENST00000494610 C12orf42Q96LP6 360 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms