RNA–Protein interactions for RNA: ENST00000494424.1

TSPAN6-202, Transcript of tetraspanin 6, humanhuman

TSL 2

Gene TSPAN6, Length 820 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-202ENST00000494424 PRSS33Q8NF86 280 aa8.22□□□□□ -1.09
TSPAN6-202ENST00000494424 EMID1Q96A84 441 aaPredicted RBP8.22□□□□□ -1.09
TSPAN6-202ENST00000494424 PRMT6Q96LA8 375 aaPredicted RBP8.22□□□□□ -1.09
TSPAN6-202ENST00000494424 WRNIP1Q96S55 665 aa8.22□□□□□ -1.09
TSPAN6-202ENST00000494424 MSRAQ9UJ68 235 aa8.22□□□□□ -1.09
TSPAN6-202ENST00000494424 SLC45A1Q9Y2W3 748 aa8.22□□□□□ -1.09
TSPAN6-202ENST00000494424 CXCL11O14625 94 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 POU3F3P20264 500 aaPredicted RBP8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 PRR20EP86478 221 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 PRR20CP86479 221 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 PRR20DP86480 221 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 PRR20BP86481 221 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 PRR20AP86496 221 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 NEUROD1Q13562 356 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 RTL5Q5HYW3 569 aaPredicted RBP8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 GPAT2Q6NUI2 795 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 FASTKD5Q7L8L6 764 aaKnown RBP8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 PROCA1Q8NCQ7 364 aaPredicted RBP8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 TRIB2Q92519 343 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 CNTNAP3BQ96NU0 1288 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 CNTNAP3Q9BZ76 1288 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 PDLIM7Q9NR12 457 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 GJD2Q9UKL4 321 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 GPR179Q6PRD1 2367 aa8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 MYBBP1AQ9BQG0 1328 aaKnown RBP8.21□□□□□ -1.1
TSPAN6-202ENST00000494424 CFAP47Q6ZTR5 3102 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 SETXQ7Z333 2677 aaKnown RBP8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 TRIM43BA6NCK2 446 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 DNM1LO00429 736 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 XRCC5P13010 732 aaKnown RBP8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 EPHB4P54760 987 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 GTF2IP78347 998 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 FPGSQ05932 587 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 FAM110CQ1W6H9 321 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 TMEM259Q4ZIN3 620 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 HFE2Q6ZVN8 426 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 FAM178BQ8IXR5 827 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 ARMC2Q8NEN0 867 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 SMCR8Q8TEV9 937 aaPredicted RBP8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 TRIM43Q96BQ3 446 aaPredicted RBP8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 SLC28A3Q9HAS3 691 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 TACC3Q9Y6A5 838 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 DOCK3Q8IZD9 2030 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 ATRNL1Q5VV63 1379 aa8.2□□□□□ -1.1
TSPAN6-202ENST00000494424 MED19A0JLT2 244 aaPredicted RBP8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 PROB1E7EW31 1015 aa8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 MSCO60682 206 aa8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 HSP90B1P14625 803 aaKnown RBP8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 CTHP32929 405 aa8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 SNX17Q15036 470 aa8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 CCDC174Q6PII3 467 aa8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 SLC39A5Q6ZMH5 540 aa8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 MORC1Q86VD1 984 aa8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 ZNF70Q9UC06 446 aaPredicted RBP8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 PCDHAC2Q9Y5I4 1007 aa8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 FAM208BQ5VWN6 2430 aa8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 TRANK1O15050 2925 aa8.19□□□□□ -1.1
TSPAN6-202ENST00000494424 REV3LO60673 3130 aa8.18□□□□□ -1.1
TSPAN6-202ENST00000494424 NRG2O14511 850 aaPredicted RBP8.18□□□□□ -1.1
TSPAN6-202ENST00000494424 F12P00748 615 aaPredicted RBP8.18□□□□□ -1.1
TSPAN6-202ENST00000494424 RBM5P52756 815 aaKnown RBP eCLIP8.18□□□□□ -1.1
TSPAN6-202ENST00000494424 FKBP1AP62942 108 aaKnown RBP8.18□□□□□ -1.1
TSPAN6-202ENST00000494424 CACNB2Q08289 660 aaPredicted RBP8.18□□□□□ -1.1
TSPAN6-202ENST00000494424 C1orf53Q5VUE5 145 aa8.18□□□□□ -1.1
TSPAN6-202ENST00000494424 DCAF15Q66K64 600 aa8.18□□□□□ -1.1
TSPAN6-202ENST00000494424 TMEM39BQ9GZU3 492 aa8.18□□□□□ -1.1
TSPAN6-202ENST00000494424 GVINP1Q7Z2Y8 2422 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 WNT7AO00755 349 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 KIAA0355O15063 1070 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 RAG1P15918 1043 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 RFC5P40937 340 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 EIF4G2P78344 907 aaKnown RBP eCLIP8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 TCF15Q12870 199 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 RASIP1Q5U651 963 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 SH3RF1Q7Z6J0 888 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 PNMA1Q8ND90 353 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 RTF1Q92541 710 aaKnown RBP8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 LPAR1Q92633 364 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 FAM89AQ96GI7 184 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 SEC31BQ9NQW1 1179 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 MTCH2Q9Y6C9 303 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 CHD7Q9P2D1 2997 aa8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 PRRC2BQ5JSZ5 2229 aaKnown RBP8.17□□□□□ -1.1
TSPAN6-202ENST00000494424 GRXCR1A8MXD5 290 aa8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 IRS4O14654 1257 aaPredicted RBP8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 DIAPH1O60610 1272 aaKnown RBP8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 ZKSCAN1P17029 563 aaPredicted RBP8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 CCND3P30281 292 aaPredicted RBP8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 CCT4P50991 539 aaKnown RBP8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 AOX1Q06278 1338 aa8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 TAF7Q15545 349 aaPredicted RBP8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 TRIM60Q495X7 471 aa8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 COPS6Q7L5N1 327 aa8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 DGLUCYQ7Z3D6 616 aa8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 LRP10Q7Z4F1 713 aa8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 BMP8AQ7Z5Y6 402 aa8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 ANKRD18AQ8IVF6 992 aa8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 CERS5Q8N5B7 392 aa8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 ANKRD13CQ8N6S4 541 aa8.16□□□□□ -1.1
TSPAN6-202ENST00000494424 SOCS4Q8WXH5 440 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms