RNA–Protein interactions for RNA: ENST00000494339.5

KPNA1-210, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 2

Gene KPNA1, Length 1,923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-210ENST00000494339 NID2Q14112 1375 aa24.06■■□□□ 1.44
KPNA1-210ENST00000494339 LMOD1P29536 600 aaPredicted RBP24.06■■□□□ 1.44
KPNA1-210ENST00000494339 RCAN1P53805 252 aa24.06■■□□□ 1.44
KPNA1-210ENST00000494339 TROAPQ12815 778 aa24.06■■□□□ 1.44
KPNA1-210ENST00000494339 CERKLQ49MI3 558 aaPredicted RBP24.06■■□□□ 1.44
KPNA1-210ENST00000494339 ANKS1AQ92625 1134 aa24.06■■□□□ 1.44
KPNA1-210ENST00000494339 TNPO1Q92973 898 aaKnown RBP24.06■■□□□ 1.44
KPNA1-210ENST00000494339 HMGN5P82970 282 aaKnown RBP24.05■■□□□ 1.44
KPNA1-210ENST00000494339 LARP1BQ659C4 914 aaKnown RBP24.05■■□□□ 1.44
KPNA1-210ENST00000494339 TATDN1Q6P1N9 297 aa24.05■■□□□ 1.44
KPNA1-210ENST00000494339 CLEC10AQ8IUN9 316 aa24.05■■□□□ 1.44
KPNA1-210ENST00000494339 FAM184AQ8NB25 1140 aa24.05■■□□□ 1.44
KPNA1-210ENST00000494339 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.05■■□□□ 1.44
KPNA1-210ENST00000494339 HERC5Q9UII4 1024 aaKnown RBP24.05■■□□□ 1.44
KPNA1-210ENST00000494339 DDAH1O94760 285 aa24.04■■□□□ 1.44
KPNA1-210ENST00000494339 SHROOM1Q2M3G4 852 aaPredicted RBP24.04■■□□□ 1.44
KPNA1-210ENST00000494339 DPY19L2Q6NUT2 758 aa24.04■■□□□ 1.44
KPNA1-210ENST00000494339 PNMA1Q8ND90 353 aa24.04■■□□□ 1.44
KPNA1-210ENST00000494339 CCDC17Q96LX7 622 aa24.04■■□□□ 1.44
KPNA1-210ENST00000494339 TMEM47Q9BQJ4 181 aa24.04■■□□□ 1.44
KPNA1-210ENST00000494339 TAOK2Q9UL54 1235 aa24.04■■□□□ 1.44
KPNA1-210ENST00000494339 STX6O43752 255 aa24.04■■□□□ 1.44
KPNA1-210ENST00000494339 HIRAP54198 1017 aaPredicted RBP24.04■■□□□ 1.44
KPNA1-210ENST00000494339 ANGEL2Q5VTE6 544 aaKnown RBP24.04■■□□□ 1.44
KPNA1-210ENST00000494339 CPLX2Q6PUV4 134 aaKnown RBP24.04■■□□□ 1.44
KPNA1-210ENST00000494339 GBP4Q96PP9 640 aa24.04■■□□□ 1.44
KPNA1-210ENST00000494339 MTMR4Q9NYA4 1195 aa24.04■■□□□ 1.44
KPNA1-210ENST00000494339 PGAP2Q9UHJ9 254 aa24.04■■□□□ 1.44
KPNA1-210ENST00000494339 GREB1LQ9C091 1923 aaPredicted RBP24.03■■□□□ 1.44
KPNA1-210ENST00000494339 CALM1P0DP23 149 aa24.03■■□□□ 1.44
KPNA1-210ENST00000494339 CALM2P0DP24 149 aa24.03■■□□□ 1.44
KPNA1-210ENST00000494339 CALM3P0DP25 149 aa24.03■■□□□ 1.44
KPNA1-210ENST00000494339 NTRK3Q16288 839 aa24.03■■□□□ 1.44
KPNA1-210ENST00000494339 MIGA2Q7L4E1 593 aa24.03■■□□□ 1.44
KPNA1-210ENST00000494339 MTMR7Q9Y216 660 aa24.03■■□□□ 1.44
KPNA1-210ENST00000494339 IGKV6D-41A0A0C4DH26 115 aa24.02■■□□□ 1.44
KPNA1-210ENST00000494339 CCDC196A0A1B0GTZ2 297 aa24.02■■□□□ 1.44
KPNA1-210ENST00000494339 CDKL5O76039 1030 aa24.02■■□□□ 1.44
KPNA1-210ENST00000494339 GDF11O95390 407 aa24.02■■□□□ 1.44
KPNA1-210ENST00000494339 BRD1O95696 1058 aa24.02■■□□□ 1.44
KPNA1-210ENST00000494339 FDPSP14324 419 aaKnown RBP24.02■■□□□ 1.44
KPNA1-210ENST00000494339 CLEC17AQ6ZS10 378 aa24.02■■□□□ 1.44
KPNA1-210ENST00000494339 CMTR1Q8N1G2 835 aaKnown RBP24.02■■□□□ 1.44
KPNA1-210ENST00000494339 PHKBQ93100 1093 aa24.02■■□□□ 1.44
KPNA1-210ENST00000494339 PDCP20941 246 aa24.02■■□□□ 1.44
KPNA1-210ENST00000494339 DEFB129Q9H1M3 183 aa24.02■■□□□ 1.44
KPNA1-210ENST00000494339 GGA3Q9NZ52 723 aa24.02■■□□□ 1.44
KPNA1-210ENST00000494339 MCM4P33991 863 aa24.01■■□□□ 1.43
KPNA1-210ENST00000494339 FOSBP53539 338 aa24.01■■□□□ 1.43
KPNA1-210ENST00000494339 RRP1BQ14684 758 aaKnown RBP24.01■■□□□ 1.43
KPNA1-210ENST00000494339 CCDC82Q8N4S0 544 aa24.01■■□□□ 1.43
KPNA1-210ENST00000494339 TEPSINQ96N21 525 aa24.01■■□□□ 1.43
KPNA1-210ENST00000494339 ORC3Q9UBD5 711 aaPredicted RBP24.01■■□□□ 1.43
KPNA1-210ENST00000494339 WDR33Q9C0J8 1336 aaKnown RBP24.01■■□□□ 1.43
KPNA1-210ENST00000494339 VPS37CA5D8V6 355 aaPredicted RBP24■■□□□ 1.43
KPNA1-210ENST00000494339 TOP1P11387 765 aaKnown RBP24■■□□□ 1.43
KPNA1-210ENST00000494339 NOVP48745 357 aa24■■□□□ 1.43
KPNA1-210ENST00000494339 ABCB5Q2M3G0 1257 aa24■■□□□ 1.43
KPNA1-210ENST00000494339 CTCFLQ8NI51 663 aaPredicted RBP24■■□□□ 1.43
KPNA1-210ENST00000494339 ADARB2Q9NS39 739 aaKnown RBP24■■□□□ 1.43
KPNA1-210ENST00000494339 TTLL1O95922 423 aa24■■□□□ 1.43
KPNA1-210ENST00000494339 PPP2R5BQ15173 497 aa24■■□□□ 1.43
KPNA1-210ENST00000494339 APOBEC3FQ8IUX4 373 aaKnown RBP24■■□□□ 1.43
KPNA1-210ENST00000494339 CLIP2Q9UDT6 1046 aa24■■□□□ 1.43
KPNA1-210ENST00000494339 KIF3AQ9Y496 699 aa24■■□□□ 1.43
KPNA1-210ENST00000494339 POLR2AP24928 1970 aaKnown RBP24■■□□□ 1.43
KPNA1-210ENST00000494339 MYH4Q9Y623 1939 aa23.99■■□□□ 1.43
KPNA1-210ENST00000494339 IFNAR1P17181 557 aa23.99■■□□□ 1.43
KPNA1-210ENST00000494339 ATP2B2Q01814 1243 aa23.99■■□□□ 1.43
KPNA1-210ENST00000494339 LRRC47Q8N1G4 583 aaKnown RBP23.99■■□□□ 1.43
KPNA1-210ENST00000494339 RBM28Q9NW13 759 aaKnown RBP23.99■■□□□ 1.43
KPNA1-210ENST00000494339 MTMR6Q9Y217 621 aa23.99■■□□□ 1.43
KPNA1-210ENST00000494339 TBC1D12O60347 775 aa23.98■■□□□ 1.43
KPNA1-210ENST00000494339 PLEKHA8P1O95397 391 aa23.98■■□□□ 1.43
KPNA1-210ENST00000494339 JAG1P78504 1218 aa23.98■■□□□ 1.43
KPNA1-210ENST00000494339 SEPT2Q15019 361 aa23.98■■□□□ 1.43
KPNA1-210ENST00000494339 SLC26A6Q9BXS9 759 aa23.98■■□□□ 1.43
KPNA1-210ENST00000494339 ZC3H4Q9UPT8 1303 aaKnown RBP23.98■■□□□ 1.43
KPNA1-210ENST00000494339 GH2P01242 217 aa23.98■■□□□ 1.43
KPNA1-210ENST00000494339 ZSCAN22P10073 491 aaPredicted RBP23.98■■□□□ 1.43
KPNA1-210ENST00000494339 PDIA4P13667 645 aaKnown RBP23.98■■□□□ 1.43
KPNA1-210ENST00000494339 TMEM179Q6ZVK1 233 aa23.98■■□□□ 1.43
KPNA1-210ENST00000494339 RASGRP2Q7LDG7 609 aa23.98■■□□□ 1.43
KPNA1-210ENST00000494339 DDX11L8A8MPP1 907 aa23.97■■□□□ 1.43
KPNA1-210ENST00000494339 SSRP1Q08945 709 aaKnown RBP23.97■■□□□ 1.43
KPNA1-210ENST00000494339 CDC37L1Q7L3B6 337 aa23.97■■□□□ 1.43
KPNA1-210ENST00000494339 L3MBTL3Q96JM7 780 aaPredicted RBP23.97■■□□□ 1.43
KPNA1-210ENST00000494339 BAZ2BQ9UIF8 2168 aaKnown RBP23.97■■□□□ 1.43
KPNA1-210ENST00000494339 GLTPD2A6NH11 291 aa23.96■■□□□ 1.43
KPNA1-210ENST00000494339 UBE2Q2LH0YL09 131 aa23.96■■□□□ 1.43
KPNA1-210ENST00000494339 GUCY1A2P33402 732 aa23.96■■□□□ 1.43
KPNA1-210ENST00000494339 PRAMEF18Q5VWM3 479 aa23.96■■□□□ 1.43
KPNA1-210ENST00000494339 NBPF11Q86T75 865 aa23.96■■□□□ 1.43
KPNA1-210ENST00000494339 KANSL2Q9H9L4 492 aa23.96■■□□□ 1.43
KPNA1-210ENST00000494339 CABP5Q9NP86 173 aa23.96■■□□□ 1.43
KPNA1-210ENST00000494339 MYH6P13533 1939 aa23.96■■□□□ 1.43
KPNA1-210ENST00000494339 H3BQV1 296 aa23.96■■□□□ 1.43
KPNA1-210ENST00000494339 FMNL1O95466 1100 aaPredicted RBP23.96■■□□□ 1.43
KPNA1-210ENST00000494339 KIF5BP33176 963 aa23.96■■□□□ 1.43
KPNA1-210ENST00000494339 GRM4Q14833 912 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms