RNA–Protein interactions for RNA: ENST00000494268.1

MSL3-217, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-217ENST00000494268 CCDC74BQ96LY2 380 aa9.29□□□□□ -0.92
MSL3-217ENST00000494268 LOC100996750A0A140TA64 210 aa9.28□□□□□ -0.92
MSL3-217ENST00000494268 SCO2A0A1W2PP80 73 aa9.28□□□□□ -0.92
MSL3-217ENST00000494268 CBX7O95931 251 aa9.28□□□□□ -0.92
MSL3-217ENST00000494268 NME1P15531 152 aaKnown RBP9.28□□□□□ -0.92
MSL3-217ENST00000494268 RAG1P15918 1043 aa9.28□□□□□ -0.92
MSL3-217ENST00000494268 ITIH2P19823 946 aa9.28□□□□□ -0.92
MSL3-217ENST00000494268 COL9A2Q14055 689 aaPredicted RBP9.28□□□□□ -0.92
MSL3-217ENST00000494268 LRRFIP1Q32MZ4 808 aaKnown RBP9.28□□□□□ -0.92
MSL3-217ENST00000494268 SFRP5Q5T4F7 317 aa9.28□□□□□ -0.92
MSL3-217ENST00000494268 RUFY4Q6ZNE9 571 aa9.28□□□□□ -0.92
MSL3-217ENST00000494268 ARHGAP27Q6ZUM4 889 aa9.28□□□□□ -0.92
MSL3-217ENST00000494268 NLRC3Q7RTR2 1065 aa9.28□□□□□ -0.92
MSL3-217ENST00000494268 TINF2Q9BSI4 451 aa9.28□□□□□ -0.92
MSL3-217ENST00000494268 KRTAP4-6Q9BYQ5 205 aa9.28□□□□□ -0.92
MSL3-217ENST00000494268 MEIS3P2A8K0S8 358 aa9.27□□□□□ -0.93
MSL3-217ENST00000494268 RGS13O14921 159 aa9.27□□□□□ -0.93
MSL3-217ENST00000494268 UBOX5O94941 541 aa9.27□□□□□ -0.93
MSL3-217ENST00000494268 ATF4P18848 351 aaPredicted RBP9.27□□□□□ -0.93
MSL3-217ENST00000494268 GBP1P32455 592 aa9.27□□□□□ -0.93
MSL3-217ENST00000494268 SEC16BQ96JE7 1060 aa9.27□□□□□ -0.93
MSL3-217ENST00000494268 PCMTD2Q9NV79 361 aa9.27□□□□□ -0.93
MSL3-217ENST00000494268 MAPK8IP1Q9UQF2 711 aa9.27□□□□□ -0.93
MSL3-217ENST00000494268 COL17A1Q9UMD9 1497 aaPredicted RBP9.27□□□□□ -0.93
MSL3-217ENST00000494268 ADAMTS4O75173 837 aa9.26□□□□□ -0.93
MSL3-217ENST00000494268 IMPDH2P12268 514 aa9.26□□□□□ -0.93
MSL3-217ENST00000494268 ETV3P41162 512 aa9.26□□□□□ -0.93
MSL3-217ENST00000494268 LRP8Q14114 963 aa9.26□□□□□ -0.93
MSL3-217ENST00000494268 NKPD1Q17RQ9 610 aa9.26□□□□□ -0.93
MSL3-217ENST00000494268 ARTNQ5T4W7 220 aa9.26□□□□□ -0.93
MSL3-217ENST00000494268 DTX1Q86Y01 620 aa9.26□□□□□ -0.93
MSL3-217ENST00000494268 NETO1Q8TDF5 533 aa9.26□□□□□ -0.93
MSL3-217ENST00000494268 SLC9A7Q96T83 725 aa9.26□□□□□ -0.93
MSL3-217ENST00000494268 FAM86C2PA6NEL3 165 aa9.25□□□□□ -0.93
MSL3-217ENST00000494268 KIAA1324LA8MWY0 1029 aaPredicted RBP9.25□□□□□ -0.93
MSL3-217ENST00000494268 LRRN2O75325 713 aa9.25□□□□□ -0.93
MSL3-217ENST00000494268 CEACAM5P06731 702 aa9.25□□□□□ -0.93
MSL3-217ENST00000494268 ACRP10323 421 aa9.25□□□□□ -0.93
MSL3-217ENST00000494268 SPINK2P20155 84 aa9.25□□□□□ -0.93
MSL3-217ENST00000494268 ZNF746Q6NUN9 644 aaPredicted RBP9.25□□□□□ -0.93
MSL3-217ENST00000494268 RBBP8NLQ8NC74 664 aaPredicted RBP9.25□□□□□ -0.93
MSL3-217ENST00000494268 MKNK2Q9HBH9 465 aa9.25□□□□□ -0.93
MSL3-217ENST00000494268 GNAT3A8MTJ3 354 aa9.24□□□□□ -0.93
MSL3-217ENST00000494268 CYP7A1P22680 504 aa9.24□□□□□ -0.93
MSL3-217ENST00000494268 EIF6P56537 245 aaKnown RBP9.24□□□□□ -0.93
MSL3-217ENST00000494268 GNL2Q13823 731 aaKnown RBP9.24□□□□□ -0.93
MSL3-217ENST00000494268 LSRQ86X29 649 aaPredicted RBP9.24□□□□□ -0.93
MSL3-217ENST00000494268 VPS37DQ86XT2 251 aa9.24□□□□□ -0.93
MSL3-217ENST00000494268 SPACA3Q8IXA5 215 aa9.24□□□□□ -0.93
MSL3-217ENST00000494268 CPLX3Q8WVH0 158 aa9.24□□□□□ -0.93
MSL3-217ENST00000494268 SHDQ96IW2 340 aa9.24□□□□□ -0.93
MSL3-217ENST00000494268 Q96M66 194 aa9.24□□□□□ -0.93
MSL3-217ENST00000494268 KREMEN1Q96MU8 473 aa9.24□□□□□ -0.93
MSL3-217ENST00000494268 CRBNQ96SW2 442 aa9.24□□□□□ -0.93
MSL3-217ENST00000494268 SRRTQ9BXP5 876 aaKnown RBP9.24□□□□□ -0.93
MSL3-217ENST00000494268 BSDC1Q9NW68 430 aaPredicted RBP9.24□□□□□ -0.93
MSL3-217ENST00000494268 CAPN6Q9Y6Q1 641 aa9.24□□□□□ -0.93
MSL3-217ENST00000494268 TNFRSF10CO14798 259 aa9.23□□□□□ -0.93
MSL3-217ENST00000494268 ZNF865P0CJ78 1059 aaPredicted RBP9.23□□□□□ -0.93
MSL3-217ENST00000494268 GIPRP48546 466 aa9.23□□□□□ -0.93
MSL3-217ENST00000494268 BNIP3Q12983 259 aa9.23□□□□□ -0.93
MSL3-217ENST00000494268 CDKAL1Q5VV42 579 aa9.23□□□□□ -0.93
MSL3-217ENST00000494268 TNKS2Q9H2K2 1166 aa9.23□□□□□ -0.93
MSL3-217ENST00000494268 FAM155AB1AL88 458 aaPredicted RBP9.22□□□□□ -0.93
MSL3-217ENST00000494268 TNK2Q07912 1038 aa9.22□□□□□ -0.93
MSL3-217ENST00000494268 ZYXQ15942 572 aaKnown RBP9.22□□□□□ -0.93
MSL3-217ENST00000494268 IFI16Q16666 785 aaKnown RBP9.22□□□□□ -0.93
MSL3-217ENST00000494268 C22orf34Q6ZV56 151 aa9.22□□□□□ -0.93
MSL3-217ENST00000494268 TMEM192Q8IY95 271 aa9.22□□□□□ -0.93
MSL3-217ENST00000494268 MFSD4AQ8N468 514 aa9.22□□□□□ -0.93
MSL3-217ENST00000494268 VWCEQ96DN2 955 aa9.22□□□□□ -0.93
MSL3-217ENST00000494268 CCDC39Q9UFE4 941 aa9.22□□□□□ -0.93
MSL3-217ENST00000494268 DNAJA1P31689 397 aaKnown RBP9.21□□□□□ -0.94
MSL3-217ENST00000494268 CD96P40200 585 aa9.21□□□□□ -0.94
MSL3-217ENST00000494268 ZC3H6P61129 1189 aaKnown RBP9.21□□□□□ -0.94
MSL3-217ENST00000494268 NAALADL2Q58DX5 795 aa9.21□□□□□ -0.94
MSL3-217ENST00000494268 INTS3Q68E01 1043 aaKnown RBP9.21□□□□□ -0.94
MSL3-217ENST00000494268 Q8N3U1 123 aa9.21□□□□□ -0.94
MSL3-217ENST00000494268 RNF141Q8WVD5 230 aa9.21□□□□□ -0.94
MSL3-217ENST00000494268 ZNF512BQ96KM6 892 aaPredicted RBP9.21□□□□□ -0.94
MSL3-217ENST00000494268 HSPA12BQ96MM6 686 aa9.21□□□□□ -0.94
MSL3-217ENST00000494268 TM9SF2Q99805 663 aa9.21□□□□□ -0.94
MSL3-217ENST00000494268 ZFP64Q9NPA5 681 aa9.21□□□□□ -0.94
MSL3-217ENST00000494268 MRVI1Q9Y6F6 885 aa9.21□□□□□ -0.94
MSL3-217ENST00000494268 TMEM265A0A087WTH1 108 aa9.2□□□□□ -0.94
MSL3-217ENST00000494268 PRNPP04156 253 aa9.2□□□□□ -0.94
MSL3-217ENST00000494268 KIR3DL1P43629 444 aa9.2□□□□□ -0.94
MSL3-217ENST00000494268 ARID5AQ03989 594 aa9.2□□□□□ -0.94
MSL3-217ENST00000494268 AOC3Q16853 763 aa9.2□□□□□ -0.94
MSL3-217ENST00000494268 NFXL1Q6ZNB6 911 aa9.2□□□□□ -0.94
MSL3-217ENST00000494268 SPRED2Q7Z698 418 aa9.2□□□□□ -0.94
MSL3-217ENST00000494268 FAM169BQ8N8A8 192 aa9.2□□□□□ -0.94
MSL3-217ENST00000494268 SLC43A3Q8NBI5 491 aa9.2□□□□□ -0.94
MSL3-217ENST00000494268 BCL7CQ8WUZ0 217 aaPredicted RBP9.2□□□□□ -0.94
MSL3-217ENST00000494268 ANAPC16Q96DE5 110 aa9.2□□□□□ -0.94
MSL3-217ENST00000494268 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.2□□□□□ -0.94
MSL3-217ENST00000494268 ST14Q9Y5Y6 855 aa9.2□□□□□ -0.94
MSL3-217ENST00000494268 GUCY2CP25092 1073 aa9.19□□□□□ -0.94
MSL3-217ENST00000494268 UNC5AQ6ZN44 842 aa9.19□□□□□ -0.94
MSL3-217ENST00000494268 COX4I2Q96KJ9 171 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms