RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 CPLX3Q8WVH0 158 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 BRMS1Q9HCU9 246 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 GPATCH2Q9NW75 528 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 REV1Q9UBZ9 1251 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 VAV3Q9UKW4 847 aa3.76□□□□□ -1.81
LMNB1-207ENST00000494185 BIN1O00499 593 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 ATE1O95260 518 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 NAT2P11245 290 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 SSTR4P31391 388 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 PRKCQQ04759 706 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 FBXW10Q5XX13 1052 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 GK5Q6ZS86 529 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 DTX1Q86Y01 620 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 TP53INP2Q8IXH6 220 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 FLCNQ8NFG4 579 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 RASGRP4Q8TDF6 673 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 RNF141Q8WVD5 230 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 SMARCC1Q92922 1105 aaPredicted RBP3.75□□□□□ -1.81
LMNB1-207ENST00000494185 TM9SF2Q99805 663 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 KRTAP9-2Q9BYQ4 174 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 POLR3KQ9Y2Y1 108 aaPredicted RBP3.75□□□□□ -1.81
LMNB1-207ENST00000494185 R3HCC1Q9Y3T6 440 aaKnown RBP3.75□□□□□ -1.81
LMNB1-207ENST00000494185 PCDHB14Q9Y5E9 798 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 CORINQ9Y5Q5 1042 aa3.75□□□□□ -1.81
LMNB1-207ENST00000494185 CLEC3AO75596 197 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 PRNPP04156 253 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 ITIH2P19823 946 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 SLBPQ14493 270 aaKnown RBP eCLIP3.74□□□□□ -1.81
LMNB1-207ENST00000494185 CLEC16AQ2KHT3 1053 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 NLRC3Q7RTR2 1065 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 TMPRSS7Q7RTY8 843 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 THAP5Q7Z6K1 395 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 XAGE3Q8WTP9 111 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 TMEM40Q8WWA1 233 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 SEC16BQ96JE7 1060 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 C8orf37Q96NL8 207 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 TINF2Q9BSI4 451 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 EHMT1Q9H9B1 1298 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 FBRSQ9HAH7 460 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 GINM1Q9NU53 330 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 TJP2Q9UDY2 1190 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 CEP131Q9UPN4 1083 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 EFR3BQ9Y2G0 817 aa3.74□□□□□ -1.81
LMNB1-207ENST00000494185 KRTAP9-6A0A140TA67 174 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 SSU72P8A0A1W2PR75 194 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 PRR19A6NJB7 356 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 DYNC1LI2O43237 492 aaPredicted RBP3.73□□□□□ -1.81
LMNB1-207ENST00000494185 SSBP05455 408 aaKnown RBP eCLIP3.73□□□□□ -1.81
LMNB1-207ENST00000494185 ZNF865P0CJ78 1059 aaPredicted RBP3.73□□□□□ -1.81
LMNB1-207ENST00000494185 ADMP35318 185 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 SOX9P48436 509 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 IRAK1P51617 712 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 EIF6P56537 245 aaKnown RBP3.73□□□□□ -1.81
LMNB1-207ENST00000494185 CLCQ05315 142 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 IKZF1Q13422 519 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 NKG7Q16617 165 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 NAALADL2Q58DX5 795 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 TNNI3KQ59H18 835 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 UBE3DQ7Z6J8 389 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 TAB3Q8N5C8 712 aaPredicted RBP3.73□□□□□ -1.81
LMNB1-207ENST00000494185 SLC43A3Q8NBI5 491 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 GATA6Q92908 595 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 ACSF2Q96CM8 615 aaPredicted RBP3.73□□□□□ -1.81
LMNB1-207ENST00000494185 PSMG3-AS1Q96PY0 264 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 ZNRF3Q9ULT6 936 aa3.73□□□□□ -1.81
LMNB1-207ENST00000494185 MEIS3P2A8K0S8 358 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 SLITRK5O94991 958 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 RAC2P15153 192 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 ATF4P18848 351 aaPredicted RBP3.72□□□□□ -1.81
LMNB1-207ENST00000494185 SPINK2P20155 84 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 DNAJA1P31689 397 aaKnown RBP3.72□□□□□ -1.81
LMNB1-207ENST00000494185 NASPP49321 788 aaPredicted RBP3.72□□□□□ -1.81
LMNB1-207ENST00000494185 ARID5AQ03989 594 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 PLCL1Q15111 1095 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 AOC3Q16853 763 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 MSMPQ1L6U9 139 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 NBPF12Q5TAG4 269 aaPredicted RBP3.72□□□□□ -1.81
LMNB1-207ENST00000494185 CDCP2Q5VXM1 449 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 KRTAP1-3Q8IUG1 177 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 CRACR2BQ8N4Y2 399 aaPredicted RBP3.72□□□□□ -1.81
LMNB1-207ENST00000494185 DHX38Q92620 1227 aaKnown RBP3.72□□□□□ -1.81
LMNB1-207ENST00000494185 DPH2Q9BQC3 489 aaPredicted RBP3.72□□□□□ -1.81
LMNB1-207ENST00000494185 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.72□□□□□ -1.81
LMNB1-207ENST00000494185 SRRTQ9BXP5 876 aaKnown RBP3.72□□□□□ -1.81
LMNB1-207ENST00000494185 MKRN2Q9H000 416 aaKnown RBP3.72□□□□□ -1.81
LMNB1-207ENST00000494185 CCDC39Q9UFE4 941 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 ZC3H7BQ9UGR2 993 aaKnown RBP3.72□□□□□ -1.81
LMNB1-207ENST00000494185 PPT2Q9UMR5 302 aa3.72□□□□□ -1.81
LMNB1-207ENST00000494185 SLC22A31A6NKX4 558 aa3.71□□□□□ -1.82
LMNB1-207ENST00000494185 CHURC1-FNTBB4DL54 471 aa3.71□□□□□ -1.82
LMNB1-207ENST00000494185 RGS13O14921 159 aa3.71□□□□□ -1.82
LMNB1-207ENST00000494185 HYAL3O43820 417 aaPredicted RBP3.71□□□□□ -1.82
LMNB1-207ENST00000494185 CBX7O95931 251 aa3.71□□□□□ -1.82
LMNB1-207ENST00000494185 LTKP29376 864 aa3.71□□□□□ -1.82
LMNB1-207ENST00000494185 GP2P55259 537 aaKnown RBP3.71□□□□□ -1.82
LMNB1-207ENST00000494185 OXCT1P55809 520 aa3.71□□□□□ -1.82
LMNB1-207ENST00000494185 DUSP4Q13115 394 aa3.71□□□□□ -1.82
LMNB1-207ENST00000494185 ARSHQ5FYA8 562 aa3.71□□□□□ -1.82
LMNB1-207ENST00000494185 INTS3Q68E01 1043 aaKnown RBP3.71□□□□□ -1.82
LMNB1-207ENST00000494185 OVOS1Q6IE37 1185 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms