RNA–Protein interactions for RNA: ENST00000494083.1

CDC42EP3-205, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 3,726 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-205ENST00000494083 RIMBP3BA6NNM3 1639 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 RIMBP3Q9UFD9 1639 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 ARNTP27540 789 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 SPRED2Q7Z698 418 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 SLC51AQ86UW1 340 aa3.68□□□□□ -1.82
CDC42EP3-205ENST00000494083 GRIN2AQ12879 1464 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 TRPM2O94759 1503 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 LRRC7Q96NW7 1537 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 CHD2O14647 1828 aaKnown RBP3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 NME2P22392 152 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 FBF1Q8TES7 1133 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 DUSP23Q9BVJ7 150 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 ANGEL1Q9UNK9 670 aaKnown RBP3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 CCDC141Q6ZP82 1450 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 PRAMEF27A3QJZ7 478 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 MAP3K11Q16584 847 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 INTS5Q6P9B9 1019 aaKnown RBP3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 SND1Q7KZF4 910 aaKnown RBP eCLIP3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 METTL22Q9BUU2 404 aaPredicted RBP3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 YIPF2Q9BWQ6 316 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 FBRSQ9HAH7 460 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 RTEL1-TNFRSF6BF6WH68 1400 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 MED1Q15648 1581 aaPredicted RBP3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 CEP170BQ9Y4F5 1589 aaPredicted RBP3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 XRCC5P13010 732 aaKnown RBP3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 TAL1P17542 331 aaPredicted RBP3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 ITIH2P19823 946 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 BNIP3Q12983 259 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 NKG7Q16617 165 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 KRT82Q9NSB4 513 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 CACNA2D2Q9NY47 1150 aa3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 TTF2Q9UNY4 1162 aaKnown RBP3.67□□□□□ -1.82
CDC42EP3-205ENST00000494083 SLFN14P0C7P3 912 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 SEPT6Q14141 434 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 DNAJC14Q6Y2X3 702 aaPredicted RBP3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 NPAS4Q8IUM7 802 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 ATXN3LQ9H3M9 355 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 PAK6Q9NQU5 681 aaPredicted RBP3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 PCDHA4Q9UN74 947 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 COL17A1Q9UMD9 1497 aaPredicted RBP3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 CNTNAP4Q9C0A0 1308 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 ATP2B2Q01814 1243 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 ALG1LQ6GMV1 187 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 LLGL2Q6P1M3 1020 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 LRFN4Q6PJG9 635 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 OGFOD3Q6PK18 319 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 TP53INP2Q8IXH6 220 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 TOP6BLQ8N6T0 577 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 PLPPR2Q96GM1 343 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 KRTAP4-12Q9BQ66 201 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 ADAMTS6Q9UKP5 1117 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 PCDHB5Q9Y5E4 795 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 ANKRD30BQ9BXX2 1392 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 CHD1O14646 1710 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 MON2Q7Z3U7 1717 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 GNA15P30679 374 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 HP1BP3Q5SSJ5 553 aaPredicted RBP3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 HEXIM2Q96MH2 286 aaKnown RBP3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 DPH2Q9BQC3 489 aaPredicted RBP3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 FAM8A1Q9UBU6 413 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 ADGRE2Q9UHX3 823 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 SPG7Q9UQ90 795 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 TLR6Q9Y2C9 796 aa3.66□□□□□ -1.82
CDC42EP3-205ENST00000494083 NUP160Q12769 1436 aa3.65□□□□□ -1.82
CDC42EP3-205ENST00000494083 PRDM7Q9NQW5 492 aa3.65□□□□□ -1.82
CDC42EP3-205ENST00000494083 FMN1Q68DA7 1419 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 CTSHP09668 335 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 IRAK1P51617 712 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 ERVK-24P63145 666 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 RING1Q06587 406 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 CCDC85BQ15834 202 aaPredicted RBP3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 KRTAP19-1Q8IUB9 90 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 PHF6Q8IWS0 365 aaKnown RBP eCLIP3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 RNF214Q8ND24 703 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 FANCD2Q9BXW9 1451 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 MRC2Q9UBG0 1479 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 DAPK1P53355 1430 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 PRR33A8MZF0 331 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 DUSP27Q5VZP5 1158 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 FLCNQ8NFG4 579 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 XAGE3Q8WTP9 111 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 BCL7CQ8WUZ0 217 aaPredicted RBP3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 BCL11AQ9H165 835 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 SSU72Q9NP77 194 aaKnown RBP3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 PPP4R2Q9NY27 417 aa3.65□□□□□ -1.83
CDC42EP3-205ENST00000494083 UGGT1Q9NYU2 1555 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 CADPSQ9ULU8 1353 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 SYNGAP1Q96PV0 1343 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 WIPI1Q5MNZ9 446 aaPredicted RBP3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 ZBTB37Q5TC79 503 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 TTBK2Q6IQ55 1244 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 VSIG10LQ86VR7 867 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 SRCIN1Q9C0H9 1055 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 BSDC1Q9NW68 430 aaPredicted RBP3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 PARP2Q9UGN5 583 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 PPM1HQ9ULR3 514 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 PLAGL2Q9UPG8 496 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 PHRF1Q9P1Y6 1649 aaKnown RBP3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 DLG5Q8TDM6 1919 aa3.64□□□□□ -1.83
CDC42EP3-205ENST00000494083 ADAMTS7Q9UKP4 1686 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms