RNA–Protein interactions for RNA: ENST00000493894.1

RHBDD3-206, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 999 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-206ENST00000493894 USP17L20D6RJB6 530 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 SGPL1O95470 568 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 ERVK-9P63128 1117 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 ERVK-24P63145 666 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 USP17L24Q0WX57 530 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 ACER1Q8TDN7 264 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 SOCS4Q8WXH5 440 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 RBPJLQ9UBG7 517 aa28.57■■■□□ 2.16
RHBDD3-206ENST00000493894 MPHOSPH10O00566 681 aaKnown RBP28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 PEX10O60683 326 aa28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 FARP2O94887 1054 aaPredicted RBP28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 CAPN2P17655 700 aa28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 VCAM1P19320 739 aa28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 MAPK4P31152 587 aa28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 EVX2Q03828 476 aa28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 UBE3CQ15386 1083 aa28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 SLFNL1Q499Z3 407 aa28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 ZSCAN25Q6NSZ9 544 aa28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 UBE2Q1Q7Z7E8 422 aa28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 CCAR1Q8IX12 1150 aaKnown RBP28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 PAK6Q9NQU5 681 aaPredicted RBP28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 ATP8A2Q9NTI2 1148 aa28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 SWAP70Q9UH65 585 aa28.56■■■□□ 2.16
RHBDD3-206ENST00000493894 PLXNB2O15031 1838 aa28.55■■■□□ 2.16
RHBDD3-206ENST00000493894 CYP2D6P10635 497 aa28.55■■■□□ 2.16
RHBDD3-206ENST00000493894 SEPT2Q15019 361 aa28.55■■■□□ 2.16
RHBDD3-206ENST00000493894 DEFB118Q96PH6 123 aa28.55■■■□□ 2.16
RHBDD3-206ENST00000493894 HTATIP2Q9BUP3 242 aa28.55■■■□□ 2.16
RHBDD3-206ENST00000493894 ECHDC1Q9NTX5 307 aa28.55■■■□□ 2.16
RHBDD3-206ENST00000493894 PRKAB2O43741 272 aa28.54■■■□□ 2.16
RHBDD3-206ENST00000493894 GUCY1A2P33402 732 aa28.54■■■□□ 2.16
RHBDD3-206ENST00000493894 AMOTL1Q8IY63 956 aa28.54■■■□□ 2.16
RHBDD3-206ENST00000493894 DDRGK1Q96HY6 314 aa28.54■■■□□ 2.16
RHBDD3-206ENST00000493894 GPATCH3Q96I76 525 aa28.54■■■□□ 2.16
RHBDD3-206ENST00000493894 NUDT12Q9BQG2 462 aa28.54■■■□□ 2.16
RHBDD3-206ENST00000493894 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.54■■■□□ 2.161e-5■■■□□ 18
RHBDD3-206ENST00000493894 MYH8P13535 1937 aa28.53■■■□□ 2.16
RHBDD3-206ENST00000493894 SLC44A5Q8NCS7 719 aa28.53■■■□□ 2.16
RHBDD3-206ENST00000493894 DCTPP1Q9H773 170 aa28.53■■■□□ 2.16
RHBDD3-206ENST00000493894 RABGAP1Q9Y3P9 1069 aa28.53■■■□□ 2.16
RHBDD3-206ENST00000493894 BAZ2AQ9UIF9 1905 aaKnown RBP28.52■■■□□ 2.16
RHBDD3-206ENST00000493894 TFRCP02786 760 aaKnown RBP28.52■■■□□ 2.16
RHBDD3-206ENST00000493894 CYP2B6P20813 491 aa28.52■■■□□ 2.16
RHBDD3-206ENST00000493894 Q3C1V9 767 aa28.52■■■□□ 2.16
RHBDD3-206ENST00000493894 CATSPERGQ6ZRH7 1159 aa28.52■■■□□ 2.16
RHBDD3-206ENST00000493894 TMEM179Q6ZVK1 233 aa28.52■■■□□ 2.16
RHBDD3-206ENST00000493894 TRIB2Q92519 343 aa28.52■■■□□ 2.16
RHBDD3-206ENST00000493894 DPF3Q92784 378 aa28.52■■■□□ 2.16
RHBDD3-206ENST00000493894 PORCNQ9H237 461 aa28.52■■■□□ 2.16
RHBDD3-206ENST00000493894 RPAP3Q9H6T3 665 aaPredicted RBP28.52■■■□□ 2.16
RHBDD3-206ENST00000493894 CWC22Q9HCG8 908 aaKnown RBP28.52■■■□□ 2.16
RHBDD3-206ENST00000493894 CHGBP05060 677 aa28.51■■■□□ 2.15
RHBDD3-206ENST00000493894 CCNA1P78396 465 aa28.51■■■□□ 2.15
RHBDD3-206ENST00000493894 HABP4Q5JVS0 413 aaKnown RBP28.51■■■□□ 2.15
RHBDD3-206ENST00000493894 GPR142Q7Z601 462 aa28.51■■■□□ 2.15
RHBDD3-206ENST00000493894 DYNLL2Q96FJ2 89 aa28.51■■■□□ 2.15
RHBDD3-206ENST00000493894 XRCC5P13010 732 aaKnown RBP28.5■■■□□ 2.15
RHBDD3-206ENST00000493894 POTEEQ6S8J3 1075 aa28.5■■■□□ 2.15
RHBDD3-206ENST00000493894 HMX1Q9NP08 348 aaPredicted RBP28.5■■■□□ 2.15
RHBDD3-206ENST00000493894 SLC4A4Q9Y6R1 1079 aa28.5■■■□□ 2.15
RHBDD3-206ENST00000493894 RPTORQ8N122 1335 aa28.49■■■□□ 2.15
RHBDD3-206ENST00000493894 H0YGN5 161 aa28.49■■■□□ 2.15
RHBDD3-206ENST00000493894 LBX2Q6XYB7 198 aa28.49■■■□□ 2.15
RHBDD3-206ENST00000493894 PLEKHH3Q7Z736 793 aa28.49■■■□□ 2.15
RHBDD3-206ENST00000493894 TRMT44Q8IYL2 757 aaKnown RBP28.49■■■□□ 2.15
RHBDD3-206ENST00000493894 CRISPLD2Q9H0B8 497 aa28.49■■■□□ 2.15
RHBDD3-206ENST00000493894 CNMDO75829 334 aa28.48■■■□□ 2.15
RHBDD3-206ENST00000493894 RGS2P41220 211 aa28.48■■■□□ 2.15
RHBDD3-206ENST00000493894 TRIM32Q13049 653 aa28.48■■■□□ 2.15
RHBDD3-206ENST00000493894 C12orf60Q5U649 245 aa28.48■■■□□ 2.15
RHBDD3-206ENST00000493894 PUS7LQ9H0K6 701 aaKnown RBP28.48■■■□□ 2.15
RHBDD3-206ENST00000493894 A0A1W2PRG0 241 aa28.47■■■□□ 2.15
RHBDD3-206ENST00000493894 SPDYE16A6NNV3 312 aaPredicted RBP28.47■■■□□ 2.15
RHBDD3-206ENST00000493894 USP17L12C9JPN9 530 aa28.47■■■□□ 2.15
RHBDD3-206ENST00000493894 USP17L21D6R901 530 aa28.47■■■□□ 2.15
RHBDD3-206ENST00000493894 ZKSCAN1P17029 563 aaPredicted RBP28.47■■■□□ 2.15
RHBDD3-206ENST00000493894 CCDC17Q96LX7 622 aa28.47■■■□□ 2.15
RHBDD3-206ENST00000493894 APBA2Q99767 749 aa28.47■■■□□ 2.15
RHBDD3-206ENST00000493894 ARHGEF10LQ9HCE6 1279 aa28.47■■■□□ 2.15
RHBDD3-206ENST00000493894 CYP2D7A0A087X1C5 515 aa28.46■■■□□ 2.15
RHBDD3-206ENST00000493894 GLRX3O76003 335 aaKnown RBP28.46■■■□□ 2.15
RHBDD3-206ENST00000493894 AKR1B1P15121 316 aa28.46■■■□□ 2.15
RHBDD3-206ENST00000493894 ICA1Q05084 483 aa28.46■■■□□ 2.15
RHBDD3-206ENST00000493894 MORN1Q5T089 497 aa28.46■■■□□ 2.15
RHBDD3-206ENST00000493894 C16orf86Q6ZW13 317 aa28.46■■■□□ 2.15
RHBDD3-206ENST00000493894 KBTBD3Q8NAB2 608 aa28.46■■■□□ 2.15
RHBDD3-206ENST00000493894 TANGO6Q9C0B7 1094 aa28.46■■■□□ 2.15
RHBDD3-206ENST00000493894 SH2D4AQ9H788 454 aa28.46■■■□□ 2.15
RHBDD3-206ENST00000493894 PRKAR2AP13861 404 aaKnown RBP28.45■■■□□ 2.14
RHBDD3-206ENST00000493894 MAP3K21Q5TCX8 1036 aa28.45■■■□□ 2.14
RHBDD3-206ENST00000493894 WDR78Q5VTH9 848 aa28.45■■■□□ 2.14
RHBDD3-206ENST00000493894 TSHZ3Q63HK5 1081 aa28.45■■■□□ 2.14
RHBDD3-206ENST00000493894 USP6NLQ92738 828 aa28.45■■■□□ 2.14
RHBDD3-206ENST00000493894 ARPP21Q9UBL0 812 aaPredicted RBP28.45■■■□□ 2.14
RHBDD3-206ENST00000493894 CDK8P49336 464 aa28.44■■■□□ 2.14
RHBDD3-206ENST00000493894 ANKLE1Q8NAG6 615 aa28.44■■■□□ 2.14
RHBDD3-206ENST00000493894 LPAR1Q92633 364 aa28.44■■■□□ 2.14
RHBDD3-206ENST00000493894 BTBD7Q9P203 1132 aa28.44■■■□□ 2.14
RHBDD3-206ENST00000493894 COLQQ9Y215 455 aaPredicted RBP28.44■■■□□ 2.14
RHBDD3-206ENST00000493894 NR2E3Q9Y5X4 410 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms