RNA–Protein interactions for RNA: ENST00000493621.1

SAMM50-205, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 283 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-205ENST00000493621 USP17L20D6RJB6 530 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 COL6A1P12109 1028 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 USP17L24Q0WX57 530 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 LHX8Q68G74 356 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 TATDN1Q6P1N9 297 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 TDHQ8IZJ6 230 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 DEFB123Q8N688 67 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 MAGEB6Q8N7X4 407 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 UBE2OQ9C0C9 1292 aaKnown RBP15.05■□□□□ -0
SAMM50-205ENST00000493621 RABGAP1Q9Y3P9 1069 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 NDUFB9Q9Y6M9 179 aa15.05■□□□□ -0
SAMM50-205ENST00000493621 NAV1Q8NEY1 1877 aa15.04■□□□□ -0
SAMM50-205ENST00000493621 CNMDO75829 334 aa15.04■□□□□ -0
SAMM50-205ENST00000493621 MAP2K5Q13163 448 aa15.04■□□□□ -0
SAMM50-205ENST00000493621 RAB3GAP1Q15042 981 aa15.04■□□□□ -0
SAMM50-205ENST00000493621 LRRC26Q2I0M4 334 aa15.04■□□□□ -0
SAMM50-205ENST00000493621 LRIT3Q3SXY7 679 aa15.04■□□□□ -0
SAMM50-205ENST00000493621 WDR78Q5VTH9 848 aa15.04■□□□□ -0
SAMM50-205ENST00000493621 GPR153Q6NV75 609 aa15.04■□□□□ -0
SAMM50-205ENST00000493621 Q7L0L9 218 aa15.04■□□□□ -0
SAMM50-205ENST00000493621 EAF2Q96CJ1 260 aaPredicted RBP15.04■□□□□ -0
SAMM50-205ENST00000493621 C12orf42Q96LP6 360 aa15.04■□□□□ -0
SAMM50-205ENST00000493621 SERPINB13Q9UIV8 391 aa15.04■□□□□ -0
SAMM50-205ENST00000493621 NOP58Q9Y2X3 529 aaKnown RBP15.04■□□□□ -0
SAMM50-205ENST00000493621 DNAH12Q6ZR08 3092 aa15.03■□□□□ -0
SAMM50-205ENST00000493621 GLRX3O76003 335 aaKnown RBP15.03■□□□□ -0
SAMM50-205ENST00000493621 CCNA1P78396 465 aa15.03■□□□□ -0
SAMM50-205ENST00000493621 ABCB5Q2M3G0 1257 aa15.03■□□□□ -0
SAMM50-205ENST00000493621 CERKLQ49MI3 558 aaPredicted RBP15.03■□□□□ -0
SAMM50-205ENST00000493621 CERS3Q8IU89 383 aa15.03■□□□□ -0
SAMM50-205ENST00000493621 ACER1Q8TDN7 264 aa15.03■□□□□ -0
SAMM50-205ENST00000493621 EDC3Q96F86 508 aaKnown RBP15.03■□□□□ -0
SAMM50-205ENST00000493621 EHD4Q9H223 541 aa15.03■□□□□ -0
SAMM50-205ENST00000493621 ANTXR1Q9H6X2 564 aa15.03■□□□□ -0
SAMM50-205ENST00000493621 VCAM1P19320 739 aa15.02■□□□□ -0
SAMM50-205ENST00000493621 USP14P54578 494 aa15.02■□□□□ -0
SAMM50-205ENST00000493621 MFSD14CQ5VZR4 134 aa15.02■□□□□ -0
SAMM50-205ENST00000493621 CATSPERGQ6ZRH7 1159 aa15.02■□□□□ -0
SAMM50-205ENST00000493621 TTC6Q86TZ1 520 aa15.02■□□□□ -0
SAMM50-205ENST00000493621 ITPRIPQ8IWB1 547 aa15.02■□□□□ -0
SAMM50-205ENST00000493621 FTSJ3Q8IY81 847 aaKnown RBP15.02■□□□□ -0
SAMM50-205ENST00000493621 KIAA1683Q9H0B3 1180 aa15.02■□□□□ -0
SAMM50-205ENST00000493621 CABP5Q9NP86 173 aa15.02■□□□□ -0
SAMM50-205ENST00000493621 FLRT1Q9NZU1 646 aa15.02■□□□□ -0
SAMM50-205ENST00000493621 SLC15A5A6NIM6 579 aa15.01□□□□□ -0.01
SAMM50-205ENST00000493621 PTPREP23469 700 aa15.01□□□□□ -0.01
SAMM50-205ENST00000493621 MDM2Q00987 491 aaPredicted RBP15.01□□□□□ -0.01
SAMM50-205ENST00000493621 MAP3K12Q12852 859 aa15.01□□□□□ -0.01
SAMM50-205ENST00000493621 RPAP3Q9H6T3 665 aaPredicted RBP15.01□□□□□ -0.01
SAMM50-205ENST00000493621 BTBD7Q9P203 1132 aa15.01□□□□□ -0.01
SAMM50-205ENST00000493621 IVNS1ABPQ9Y6Y0 642 aa15.01□□□□□ -0.01
SAMM50-205ENST00000493621 MYH8P13535 1937 aa15.01□□□□□ -0.01
SAMM50-205ENST00000493621 A0A0C4DFX4 3053 aa15.01□□□□□ -0.01
SAMM50-205ENST00000493621 RLBP1P12271 317 aa15□□□□□ -0.01
SAMM50-205ENST00000493621 CNGA1P29973 690 aa15□□□□□ -0.01
SAMM50-205ENST00000493621 SHMT1P34896 483 aa15□□□□□ -0.01
SAMM50-205ENST00000493621 PLCD1P51178 756 aa15□□□□□ -0.01
SAMM50-205ENST00000493621 ATP2B2Q01814 1243 aa15□□□□□ -0.01
SAMM50-205ENST00000493621 SENP6Q9GZR1 1112 aaPredicted RBP15□□□□□ -0.01
SAMM50-205ENST00000493621 SPDYE16A6NNV3 312 aaPredicted RBP14.99□□□□□ -0.01
SAMM50-205ENST00000493621 POLR3DP05423 398 aaPredicted RBP14.99□□□□□ -0.01
SAMM50-205ENST00000493621 GUCY1A2P33402 732 aa14.99□□□□□ -0.01
SAMM50-205ENST00000493621 GRB14Q14449 540 aa14.99□□□□□ -0.01
SAMM50-205ENST00000493621 LBX2Q6XYB7 198 aa14.99□□□□□ -0.01
SAMM50-205ENST00000493621 AACSQ86V21 672 aa14.99□□□□□ -0.01
SAMM50-205ENST00000493621 NPLOC4Q8TAT6 608 aa14.99□□□□□ -0.01
SAMM50-205ENST00000493621 RIOK1Q9BRS2 568 aaKnown RBP14.99□□□□□ -0.01
SAMM50-205ENST00000493621 MTMR10Q9NXD2 777 aa14.99□□□□□ -0.01
SAMM50-205ENST00000493621 DDX20Q9UHI6 824 aaKnown RBP14.99□□□□□ -0.01
SAMM50-205ENST00000493621 EXOC6BQ9Y2D4 811 aa14.99□□□□□ -0.01
SAMM50-205ENST00000493621 RLFQ13129 1914 aa14.98□□□□□ -0.01
SAMM50-205ENST00000493621 MAGEB6P1A0A0J9YX57 407 aa14.98□□□□□ -0.01
SAMM50-205ENST00000493621 CYP2C19P33261 490 aa14.98□□□□□ -0.01
SAMM50-205ENST00000493621 SEPT2Q15019 361 aa14.98□□□□□ -0.01
SAMM50-205ENST00000493621 CEP85Q6P2H3 762 aa14.98□□□□□ -0.01
SAMM50-205ENST00000493621 TMED8Q6PL24 325 aaPredicted RBP14.98□□□□□ -0.01
SAMM50-205ENST00000493621 STXBP5LQ9Y2K9 1186 aa14.98□□□□□ -0.01
SAMM50-205ENST00000493621 ZNF236Q9UL36 1845 aa14.98□□□□□ -0.01
SAMM50-205ENST00000493621 MPHOSPH10O00566 681 aaKnown RBP14.97□□□□□ -0.01
SAMM50-205ENST00000493621 MSCO60682 206 aa14.97□□□□□ -0.01
SAMM50-205ENST00000493621 HOXC6P09630 235 aa14.97□□□□□ -0.01
SAMM50-205ENST00000493621 ATN1P54259 1190 aaPredicted RBP14.97□□□□□ -0.01
SAMM50-205ENST00000493621 EVX2Q03828 476 aa14.97□□□□□ -0.01
SAMM50-205ENST00000493621 ERC1Q8IUD2 1116 aa14.97□□□□□ -0.01
SAMM50-205ENST00000493621 TRPV1Q8NER1 839 aa14.97□□□□□ -0.01
SAMM50-205ENST00000493621 LPAR1Q92633 364 aa14.97□□□□□ -0.01
SAMM50-205ENST00000493621 LBHD1Q9BQE6 289 aaPredicted RBP14.97□□□□□ -0.01
SAMM50-205ENST00000493621 A0A0G2JMZ2 1700 aa14.97□□□□□ -0.01
SAMM50-205ENST00000493621 CUL9Q8IWT3 2517 aa14.97□□□□□ -0.01
SAMM50-205ENST00000493621 LTBP2Q14767 1821 aa14.96□□□□□ -0.01
SAMM50-205ENST00000493621 ZNFX1Q9P2E3 1918 aaKnown RBP14.96□□□□□ -0.01
SAMM50-205ENST00000493621 A0A1W2PRG0 241 aa14.96□□□□□ -0.01
SAMM50-205ENST00000493621 GABPAQ06546 454 aa14.96□□□□□ -0.01
SAMM50-205ENST00000493621 COG2Q14746 738 aa14.96□□□□□ -0.01
SAMM50-205ENST00000493621 SLC9C2Q5TAH2 1124 aa14.96□□□□□ -0.01
SAMM50-205ENST00000493621 DPP9Q86TI2 863 aa14.96□□□□□ -0.01
SAMM50-205ENST00000493621 MOV10L1Q9BXT6 1211 aaKnown RBP14.96□□□□□ -0.01
SAMM50-205ENST00000493621 CRNKL1Q9BZJ0 848 aaKnown RBP14.96□□□□□ -0.01
SAMM50-205ENST00000493621 TANGO6Q9C0B7 1094 aa14.96□□□□□ -0.01
SAMM50-205ENST00000493621 IL1RAPL2Q9NP60 686 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms