RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 TATDN1Q6P1N9 297 aa22.05■■□□□ 1.12
NECTIN3-211ENST00000493615 NUP133Q8WUM0 1156 aa22.05■■□□□ 1.12
NECTIN3-211ENST00000493615 CEP95Q96GE4 821 aa22.05■■□□□ 1.12
NECTIN3-211ENST00000493615 EAPPQ56P03 285 aaPredicted RBP22.04■■□□□ 1.12
NECTIN3-211ENST00000493615 ZNF784Q8NCA9 323 aaPredicted RBP22.04■■□□□ 1.12
NECTIN3-211ENST00000493615 STX8Q9UNK0 236 aa22.04■■□□□ 1.12
NECTIN3-211ENST00000493615 SYT1P21579 422 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 RRP1BQ14684 758 aaKnown RBP22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 CATIPQ7Z7H3 387 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 CLEC10AQ8IUN9 316 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 FANCBQ8NB91 859 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 IGKV6D-41A0A0C4DH26 115 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 DHX16O60231 1041 aaKnown RBP22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 FDPSP14324 419 aaKnown RBP22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 NUCB2P80303 420 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 NTRK3Q16288 839 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 CCDC178Q5BJE1 867 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 TMEM47Q9BQJ4 181 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 TRIM34Q9BYJ4 488 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 NID2Q14112 1375 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 PLIN4Q96Q06 1357 aa22.03■■□□□ 1.12
NECTIN3-211ENST00000493615 CPLX1O14810 134 aa22.02■■□□□ 1.12
NECTIN3-211ENST00000493615 NOVP48745 357 aa22.02■■□□□ 1.12
NECTIN3-211ENST00000493615 RCAN1P53805 252 aa22.02■■□□□ 1.12
NECTIN3-211ENST00000493615 CERKLQ49MI3 558 aaPredicted RBP22.02■■□□□ 1.12
NECTIN3-211ENST00000493615 FOXD4L5Q5VV16 416 aaPredicted RBP22.02■■□□□ 1.12
NECTIN3-211ENST00000493615 FOXD4L4Q8WXT5 416 aaPredicted RBP22.02■■□□□ 1.12
NECTIN3-211ENST00000493615 TEPSINQ96N21 525 aa22.02■■□□□ 1.12
NECTIN3-211ENST00000493615 MTMR4Q9NYA4 1195 aa22.02■■□□□ 1.12
NECTIN3-211ENST00000493615 MPHOSPH10O00566 681 aaKnown RBP22.01■■□□□ 1.11
NECTIN3-211ENST00000493615 POTEIP0CG38 1075 aa22.01■■□□□ 1.11
NECTIN3-211ENST00000493615 POTEJP0CG39 1038 aa22.01■■□□□ 1.11
NECTIN3-211ENST00000493615 JAG1P78504 1218 aa22.01■■□□□ 1.11
NECTIN3-211ENST00000493615 RTN1Q16799 776 aa22.01■■□□□ 1.11
NECTIN3-211ENST00000493615 ANGEL2Q5VTE6 544 aaKnown RBP22.01■■□□□ 1.11
NECTIN3-211ENST00000493615 CCDC17Q96LX7 622 aa22.01■■□□□ 1.11
NECTIN3-211ENST00000493615 KAT14Q9H8E8 782 aa22.01■■□□□ 1.11
NECTIN3-211ENST00000493615 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.01■■□□□ 1.11
NECTIN3-211ENST00000493615 BRD1O95696 1058 aa22■■□□□ 1.11
NECTIN3-211ENST00000493615 TNNI2P48788 182 aa22■■□□□ 1.11
NECTIN3-211ENST00000493615 MIGA2Q7L4E1 593 aa22■■□□□ 1.11
NECTIN3-211ENST00000493615 CMTR1Q8N1G2 835 aaKnown RBP22■■□□□ 1.11
NECTIN3-211ENST00000493615 PNMA1Q8ND90 353 aa22■■□□□ 1.11
NECTIN3-211ENST00000493615 TNPO1Q92973 898 aaKnown RBP22■■□□□ 1.11
NECTIN3-211ENST00000493615 CHMP4CQ96CF2 233 aa22■■□□□ 1.11
NECTIN3-211ENST00000493615 HERC5Q9UII4 1024 aaKnown RBP22■■□□□ 1.11
NECTIN3-211ENST00000493615 TAOK2Q9UL54 1235 aa22■■□□□ 1.11
NECTIN3-211ENST00000493615 DDAH1O94760 285 aa22■■□□□ 1.11
NECTIN3-211ENST00000493615 TNFAIP1Q13829 316 aa22■■□□□ 1.11
NECTIN3-211ENST00000493615 LARP1BQ659C4 914 aaKnown RBP22■■□□□ 1.11
NECTIN3-211ENST00000493615 USP50Q70EL3 339 aaPredicted RBP22■■□□□ 1.11
NECTIN3-211ENST00000493615 PHKBQ93100 1093 aa22■■□□□ 1.11
NECTIN3-211ENST00000493615 DEFB129Q9H1M3 183 aa22■■□□□ 1.11
NECTIN3-211ENST00000493615 CLEC11AQ9Y240 323 aa22■■□□□ 1.11
NECTIN3-211ENST00000493615 STX6O43752 255 aa21.99■■□□□ 1.11
NECTIN3-211ENST00000493615 GDF11O95390 407 aa21.99■■□□□ 1.11
NECTIN3-211ENST00000493615 HMGN5P82970 282 aaKnown RBP21.99■■□□□ 1.11
NECTIN3-211ENST00000493615 PNMA8AQ86V59 439 aaPredicted RBP21.98■■□□□ 1.11
NECTIN3-211ENST00000493615 GGA3Q9NZ52 723 aa21.98■■□□□ 1.11
NECTIN3-211ENST00000493615 CALM1P0DP23 149 aa21.98■■□□□ 1.11
NECTIN3-211ENST00000493615 CALM2P0DP24 149 aa21.98■■□□□ 1.11
NECTIN3-211ENST00000493615 CALM3P0DP25 149 aa21.98■■□□□ 1.11
NECTIN3-211ENST00000493615 GUCY1A2P33402 732 aa21.98■■□□□ 1.11
NECTIN3-211ENST00000493615 CCDC82Q8N4S0 544 aa21.98■■□□□ 1.11
NECTIN3-211ENST00000493615 ORC3Q9UBD5 711 aaPredicted RBP21.98■■□□□ 1.11
NECTIN3-211ENST00000493615 MTMR6Q9Y217 621 aa21.98■■□□□ 1.11
NECTIN3-211ENST00000493615 POLR2AP24928 1970 aaKnown RBP21.97■■□□□ 1.11
NECTIN3-211ENST00000493615 UBE2Q2LH0YL09 131 aa21.97■■□□□ 1.11
NECTIN3-211ENST00000493615 TBC1D12O60347 775 aa21.97■■□□□ 1.11
NECTIN3-211ENST00000493615 PLEKHA8P1O95397 391 aa21.97■■□□□ 1.11
NECTIN3-211ENST00000493615 TOP1P11387 765 aaKnown RBP21.97■■□□□ 1.11
NECTIN3-211ENST00000493615 IFNAR1P17181 557 aa21.97■■□□□ 1.11
NECTIN3-211ENST00000493615 MAP3K10Q02779 954 aa21.97■■□□□ 1.11
NECTIN3-211ENST00000493615 RASGRP2Q7LDG7 609 aa21.97■■□□□ 1.11
NECTIN3-211ENST00000493615 FAM184AQ8NB25 1140 aa21.97■■□□□ 1.11
NECTIN3-211ENST00000493615 CLIP2Q9UDT6 1046 aa21.97■■□□□ 1.11
NECTIN3-211ENST00000493615 MYH8P13535 1937 aa21.97■■□□□ 1.11
NECTIN3-211ENST00000493615 CCDC196A0A1B0GTZ2 297 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 KIF3CO14782 793 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 SEPT2Q15019 361 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 ABCB5Q2M3G0 1257 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 NBPF11Q86T75 865 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 MTMR7Q9Y216 660 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 TTLL1O95922 423 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 GH2P01242 217 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 PDCP20941 246 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 FOSBP53539 338 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 FUT2Q10981 343 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 PRAMEF18Q5VWM3 479 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 CPLX2Q6PUV4 134 aaKnown RBP21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 SIAH1Q8IUQ4 282 aa21.96■■□□□ 1.11
NECTIN3-211ENST00000493615 WDR33Q9C0J8 1336 aaKnown RBP21.95■■□□□ 1.1
NECTIN3-211ENST00000493615 CDKL5O76039 1030 aa21.95■■□□□ 1.1
NECTIN3-211ENST00000493615 PPP2R5BQ15173 497 aa21.95■■□□□ 1.1
NECTIN3-211ENST00000493615 NBPF12Q5TAG4 269 aaPredicted RBP21.95■■□□□ 1.1
NECTIN3-211ENST00000493615 APOBEC3FQ8IUX4 373 aaKnown RBP21.95■■□□□ 1.1
NECTIN3-211ENST00000493615 LRRC47Q8N1G4 583 aaKnown RBP21.95■■□□□ 1.1
NECTIN3-211ENST00000493615 AIFM3Q96NN9 605 aa21.95■■□□□ 1.1
NECTIN3-211ENST00000493615 GREB1LQ9C091 1923 aaPredicted RBP21.95■■□□□ 1.1
NECTIN3-211ENST00000493615 VPS37CA5D8V6 355 aaPredicted RBP21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms