RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 PRKAR2AP13861 404 aaKnown RBP12.47□□□□□ -0.41
NUDCD3-210ENST00000493613 ABCB5Q2M3G0 1257 aa12.47□□□□□ -0.41
NUDCD3-210ENST00000493613 Q3C1V9 767 aa12.47□□□□□ -0.41
NUDCD3-210ENST00000493613 MAP3K21Q5TCX8 1036 aa12.47□□□□□ -0.41
NUDCD3-210ENST00000493613 GPR142Q7Z601 462 aa12.47□□□□□ -0.41
NUDCD3-210ENST00000493613 RHPN1Q8TCX5 695 aa12.47□□□□□ -0.41
NUDCD3-210ENST00000493613 C12orf42Q96LP6 360 aa12.47□□□□□ -0.41
NUDCD3-210ENST00000493613 RIOK1Q9BRS2 568 aaKnown RBP12.47□□□□□ -0.41
NUDCD3-210ENST00000493613 BCL11AQ9H165 835 aa12.47□□□□□ -0.41
NUDCD3-210ENST00000493613 PORCNQ9H237 461 aa12.47□□□□□ -0.41
NUDCD3-210ENST00000493613 USP17L15C9J2P7 530 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 USP17L13C9JLJ4 530 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 USP17L11C9JVI0 530 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 USP17L18D6R9N7 530 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 USP17L22D6RA61 530 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 USP17L17D6RBQ6 530 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 USP17L19D6RCP7 530 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 USP17L20D6RJB6 530 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 APBB1O00213 710 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 MS4A1P11836 297 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 ZKSCAN1P17029 563 aaPredicted RBP12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 RGS2P41220 211 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 PLCD1P51178 756 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 USP14P54578 494 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 USP17L24Q0WX57 530 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 SLC9C2Q5TAH2 1124 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 PLEKHH3Q7Z736 793 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 TRMT44Q8IYL2 757 aaKnown RBP12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 CLASRPQ8N2M8 674 aaKnown RBP12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 CRNKL1Q9BZJ0 848 aaKnown RBP12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 NBPF3Q9H094 633 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 KIAA1683Q9H0B3 1180 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 CWC22Q9HCG8 908 aaKnown RBP12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 CABP5Q9NP86 173 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 RABGAP1Q9Y3P9 1069 aa12.46□□□□□ -0.41
NUDCD3-210ENST00000493613 COL6A3P12111 3177 aa12.46□□□□□ -0.42
NUDCD3-210ENST00000493613 MYH4Q9Y623 1939 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 GOLIM4O00461 696 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 POLR3DP05423 398 aaPredicted RBP12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 PDE6AP16499 860 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 VCAM1P19320 739 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 SHMT1P34896 483 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 CCNA1P78396 465 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 CACNB2Q08289 660 aaPredicted RBP12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 MORN1Q5T089 497 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 RPAP2Q8IXW5 612 aaPredicted RBP12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 C7orf61Q8IZ16 206 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 ACER1Q8TDN7 264 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 USP6NLQ92738 828 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 KIF1BPQ96EK5 621 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 DNAJC2Q99543 621 aaKnown RBP12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 APBA2Q99767 749 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 OGDHLQ9ULD0 1010 aa12.45□□□□□ -0.42
NUDCD3-210ENST00000493613 ZNF532Q9HCE3 1301 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 A0A1W2PPC1 479 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 HMMRO75330 724 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 CNMDO75829 334 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 GLRX3O76003 335 aaKnown RBP12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 IFIT2P09913 472 aaKnown RBP12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 MNX1P50219 401 aaPredicted RBP12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 CCL14Q16627 93 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 WDR78Q5VTH9 848 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 CATSPERGQ6ZRH7 1159 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 C11orf49Q9H6J7 331 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 MCM9Q9NXL9 1143 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 STAP2Q9UGK3 403 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 DDX19BQ9UMR2 479 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 COG6Q9Y2V7 657 aa12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 LAMA2P24043 3122 aaKnown RBP12.44□□□□□ -0.42
NUDCD3-210ENST00000493613 GREB1LQ9C091 1923 aaPredicted RBP12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 TCRBV5S4A2TA0A5A2 114 aa12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 MPHOSPH10O00566 681 aaKnown RBP12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 CCND3P30281 292 aaPredicted RBP12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 EVX2Q03828 476 aa12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 GABPAQ06546 454 aa12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 MAP2K5Q13163 448 aa12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 SEPT2Q15019 361 aa12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 LBX2Q6XYB7 198 aa12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 SDR42E1Q8WUS8 393 aa12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 RPAP3Q9H6T3 665 aaPredicted RBP12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 LTBP2Q14767 1821 aa12.43□□□□□ -0.42
NUDCD3-210ENST00000493613 SPDYE16A6NNV3 312 aaPredicted RBP12.42□□□□□ -0.42
NUDCD3-210ENST00000493613 GUCY1A2P33402 732 aa12.42□□□□□ -0.42
NUDCD3-210ENST00000493613 SIRT2Q8IXJ6 389 aa12.42□□□□□ -0.42
NUDCD3-210ENST00000493613 LCORLQ8N3X6 602 aa12.42□□□□□ -0.42
NUDCD3-210ENST00000493613 EDC3Q96F86 508 aaKnown RBP12.42□□□□□ -0.42
NUDCD3-210ENST00000493613 DCP1AQ9NPI6 582 aaPredicted RBP12.42□□□□□ -0.42
NUDCD3-210ENST00000493613 ZBTB40Q9NUA8 1239 aa12.42□□□□□ -0.42
NUDCD3-210ENST00000493613 PAG1Q9NWQ8 432 aa12.42□□□□□ -0.42
NUDCD3-210ENST00000493613 BTBD7Q9P203 1132 aa12.42□□□□□ -0.42
NUDCD3-210ENST00000493613 ZMYND8Q9ULU4 1186 aaPredicted RBP12.42□□□□□ -0.42
NUDCD3-210ENST00000493613 IVNS1ABPQ9Y6Y0 642 aa12.42□□□□□ -0.42
NUDCD3-210ENST00000493613 PFASO15067 1338 aa12.41□□□□□ -0.42
NUDCD3-210ENST00000493613 SLC15A5A6NIM6 579 aa12.41□□□□□ -0.42
NUDCD3-210ENST00000493613 RAB11FIP3O75154 756 aa12.41□□□□□ -0.42
NUDCD3-210ENST00000493613 SYN1P17600 705 aa12.41□□□□□ -0.42
NUDCD3-210ENST00000493613 PTPREP23469 700 aa12.41□□□□□ -0.42
NUDCD3-210ENST00000493613 LHX8Q68G74 356 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms