RNA–Protein interactions for RNA: ENST00000493551.1

CLIP4-212, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 3

Gene CLIP4, Length 627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-212ENST00000493551 ZNF644Q9H582 1327 aaPredicted RBP6.99□□□□□ -1.29
CLIP4-212ENST00000493551 DNMT1P26358 1616 aaKnown RBP6.98□□□□□ -1.29
CLIP4-212ENST00000493551 GDNFP39905 211 aa6.98□□□□□ -1.29
CLIP4-212ENST00000493551 NKPD1Q17RQ9 610 aa6.98□□□□□ -1.29
CLIP4-212ENST00000493551 CCDC87Q9NVE4 849 aa6.98□□□□□ -1.29
CLIP4-212ENST00000493551 RGS17Q9UGC6 210 aaPredicted RBP6.98□□□□□ -1.29
CLIP4-212ENST00000493551 A2ML1A8K2U0 1454 aa6.98□□□□□ -1.29
CLIP4-212ENST00000493551 ALKQ9UM73 1620 aa6.98□□□□□ -1.29
CLIP4-212ENST00000493551 TNRQ92752 1358 aa6.97□□□□□ -1.29
CLIP4-212ENST00000493551 TCAF2A6NFQ2 919 aa6.97□□□□□ -1.29
CLIP4-212ENST00000493551 GNAT3A8MTJ3 354 aa6.97□□□□□ -1.29
CLIP4-212ENST00000493551 POLR1AO95602 1720 aaPredicted RBP6.97□□□□□ -1.29
CLIP4-212ENST00000493551 NEFLP07196 543 aa6.97□□□□□ -1.29
CLIP4-212ENST00000493551 MED14OSP0DP75 135 aa6.97□□□□□ -1.29
CLIP4-212ENST00000493551 SF3B2Q13435 895 aaKnown RBP6.97□□□□□ -1.29
CLIP4-212ENST00000493551 RNF214Q8ND24 703 aa6.97□□□□□ -1.29
CLIP4-212ENST00000493551 ABCB6Q9NP58 842 aa6.97□□□□□ -1.29
CLIP4-212ENST00000493551 CFDP1Q9UEE9 299 aaPredicted RBP6.97□□□□□ -1.29
CLIP4-212ENST00000493551 CPS1P31327 1500 aa6.96□□□□□ -1.29
CLIP4-212ENST00000493551 VWDEQ8N2E2 1590 aa6.96□□□□□ -1.29
CLIP4-212ENST00000493551 INO80Q9ULG1 1556 aaPredicted RBP6.96□□□□□ -1.29
CLIP4-212ENST00000493551 KIF3BO15066 747 aa6.96□□□□□ -1.3
CLIP4-212ENST00000493551 USPL1Q5W0Q7 1092 aa6.96□□□□□ -1.3
CLIP4-212ENST00000493551 KRTAP5-3Q6L8H2 238 aa6.96□□□□□ -1.3
CLIP4-212ENST00000493551 PRPF40BQ6NWY9 871 aaKnown RBP6.96□□□□□ -1.3
CLIP4-212ENST00000493551 ATG14Q6ZNE5 492 aa6.96□□□□□ -1.3
CLIP4-212ENST00000493551 EPB41L4BQ9H329 900 aa6.96□□□□□ -1.3
CLIP4-212ENST00000493551 CARS2Q9HA77 564 aaKnown RBP6.96□□□□□ -1.3
CLIP4-212ENST00000493551 NPHS2Q9NP85 383 aa6.96□□□□□ -1.3
CLIP4-212ENST00000493551 C19orf73Q9NVV2 129 aa6.96□□□□□ -1.3
CLIP4-212ENST00000493551 GPATCH8Q9UKJ3 1502 aaKnown RBP6.96□□□□□ -1.3
CLIP4-212ENST00000493551 SETD1AO15047 1707 aaKnown RBP6.96□□□□□ -1.3
CLIP4-212ENST00000493551 PLXNC1O60486 1568 aa6.95□□□□□ -1.3
CLIP4-212ENST00000493551 NPHP4O75161 1426 aaPredicted RBP6.95□□□□□ -1.3
CLIP4-212ENST00000493551 HOXA5P20719 270 aa6.95□□□□□ -1.3
CLIP4-212ENST00000493551 ZNF157P51786 506 aaPredicted RBP6.95□□□□□ -1.3
CLIP4-212ENST00000493551 ERVK-24P63145 666 aa6.95□□□□□ -1.3
CLIP4-212ENST00000493551 FKBP4Q02790 459 aaKnown RBP eCLIP6.95□□□□□ -1.3
CLIP4-212ENST00000493551 FAAP100Q0VG06 881 aa6.95□□□□□ -1.3
CLIP4-212ENST00000493551 CCDC120Q96HB5 630 aa6.95□□□□□ -1.3
CLIP4-212ENST00000493551 PRDM10Q9NQV6 1147 aa6.95□□□□□ -1.3
CLIP4-212ENST00000493551 MTMR7Q9Y216 660 aa6.95□□□□□ -1.3
CLIP4-212ENST00000493551 CCNB3Q8WWL7 1395 aa6.95□□□□□ -1.3
CLIP4-212ENST00000493551 CCDC18Q5T9S5 1454 aa6.94□□□□□ -1.3
CLIP4-212ENST00000493551 PRKCSHP14314 528 aaPredicted RBP6.94□□□□□ -1.3
CLIP4-212ENST00000493551 GLDCP23378 1020 aa6.94□□□□□ -1.3
CLIP4-212ENST00000493551 ZC3H12AQ5D1E8 599 aaKnown RBP6.94□□□□□ -1.3
CLIP4-212ENST00000493551 KCNB2Q92953 911 aa6.94□□□□□ -1.3
CLIP4-212ENST00000493551 DCP1AQ9NPI6 582 aaPredicted RBP6.94□□□□□ -1.3
CLIP4-212ENST00000493551 STRCP1A6NGW2 1772 aa6.94□□□□□ -1.3
CLIP4-212ENST00000493551 CASKIN1Q8WXD9 1431 aa6.93□□□□□ -1.3
CLIP4-212ENST00000493551 LRRC7Q96NW7 1537 aa6.93□□□□□ -1.3
CLIP4-212ENST00000493551 TMEM238LA0A1B0GVL6 79 aa6.93□□□□□ -1.3
CLIP4-212ENST00000493551 NUAK1O60285 661 aa6.93□□□□□ -1.3
CLIP4-212ENST00000493551 SSFA2P28290 1259 aa6.93□□□□□ -1.3
CLIP4-212ENST00000493551 PDZD3Q86UT5 571 aa6.93□□□□□ -1.3
CLIP4-212ENST00000493551 RELTQ969Z4 430 aa6.93□□□□□ -1.3
CLIP4-212ENST00000493551 C20orf173Q96LM9 149 aa6.93□□□□□ -1.3
CLIP4-212ENST00000493551 FOXQ1Q9C009 403 aa6.93□□□□□ -1.3
CLIP4-212ENST00000493551 WASHC2CQ9Y4E1 1318 aa6.93□□□□□ -1.3
CLIP4-212ENST00000493551 LINC00310P59036 64 aa6.92□□□□□ -1.3
CLIP4-212ENST00000493551 PPP2R3AQ06190 1150 aa6.92□□□□□ -1.3
CLIP4-212ENST00000493551 NPAS4Q8IUM7 802 aa6.92□□□□□ -1.3
CLIP4-212ENST00000493551 PRDM5Q9NQX1 630 aaPredicted RBP6.92□□□□□ -1.3
CLIP4-212ENST00000493551 SMG5Q9UPR3 1016 aaKnown RBP6.92□□□□□ -1.3
CLIP4-212ENST00000493551 TRAK1Q9UPV9 953 aa6.92□□□□□ -1.3
CLIP4-212ENST00000493551 MAPK8IP1Q9UQF2 711 aa6.92□□□□□ -1.3
CLIP4-212ENST00000493551 IQGAP1P46940 1657 aa6.92□□□□□ -1.3
CLIP4-212ENST00000493551 FAM135AQ9P2D6 1515 aa6.91□□□□□ -1.3
CLIP4-212ENST00000493551 UGGT1Q9NYU2 1555 aa6.91□□□□□ -1.3
CLIP4-212ENST00000493551 RNF17Q9BXT8 1623 aaKnown RBP6.91□□□□□ -1.3
CLIP4-212ENST00000493551 ADGBQ8N7X0 1667 aa6.91□□□□□ -1.3
CLIP4-212ENST00000493551 ETV2O00321 342 aaPredicted RBP6.91□□□□□ -1.3
CLIP4-212ENST00000493551 CPNE3O75131 537 aaKnown RBP6.91□□□□□ -1.3
CLIP4-212ENST00000493551 THEMISQ8N1K5 641 aaPredicted RBP6.91□□□□□ -1.3
CLIP4-212ENST00000493551 SLC26A8Q96RN1 970 aa6.91□□□□□ -1.3
CLIP4-212ENST00000493551 KCNK12Q9HB15 430 aa6.91□□□□□ -1.3
CLIP4-212ENST00000493551 MTUS2Q5JR59 1369 aa6.91□□□□□ -1.3
CLIP4-212ENST00000493551 CSRNP1Q96S65 589 aa6.9□□□□□ -1.3
CLIP4-212ENST00000493551 ATP13A1Q9HD20 1204 aa6.9□□□□□ -1.3
CLIP4-212ENST00000493551 SEMA3GQ9NS98 782 aa6.9□□□□□ -1.3
CLIP4-212ENST00000493551 TMEM39AQ9NV64 488 aa6.9□□□□□ -1.3
CLIP4-212ENST00000493551 GPN3Q9UHW5 284 aaPredicted RBP6.9□□□□□ -1.3
CLIP4-212ENST00000493551 PZPP20742 1482 aa6.9□□□□□ -1.31
CLIP4-212ENST00000493551 PLEKHH2Q8IVE3 1493 aa6.9□□□□□ -1.31
CLIP4-212ENST00000493551 KDM5DQ9BY66 1539 aa6.9□□□□□ -1.31
CLIP4-212ENST00000493551 EOMESO95936 686 aa6.89□□□□□ -1.31
CLIP4-212ENST00000493551 RAC2P15153 192 aa6.89□□□□□ -1.31
CLIP4-212ENST00000493551 DBX2Q6ZNG2 339 aa6.89□□□□□ -1.31
CLIP4-212ENST00000493551 PARD6AQ9NPB6 346 aa6.89□□□□□ -1.31
CLIP4-212ENST00000493551 MIA2Q96PC5 1412 aa6.89□□□□□ -1.31
CLIP4-212ENST00000493551 KIAA1107Q9UPP5 1409 aa6.89□□□□□ -1.31
CLIP4-212ENST00000493551 FYCO1Q9BQS8 1478 aa6.89□□□□□ -1.31
CLIP4-212ENST00000493551 TIAM1Q13009 1591 aa6.89□□□□□ -1.31
CLIP4-212ENST00000493551 DHX29Q7Z478 1369 aaKnown RBP6.88□□□□□ -1.31
CLIP4-212ENST00000493551 GADD45BO75293 160 aaPredicted RBP6.88□□□□□ -1.31
CLIP4-212ENST00000493551 SRFP11831 508 aa6.88□□□□□ -1.31
CLIP4-212ENST00000493551 ORC1Q13415 861 aa6.88□□□□□ -1.31
CLIP4-212ENST00000493551 SULF2Q8IWU5 870 aa6.88□□□□□ -1.31
CLIP4-212ENST00000493551 ABHD4Q8TB40 342 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms