RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 LRRC26Q2I0M4 334 aa13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 Q7L0L9 218 aa13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 ADGRA1Q86SQ6 560 aa13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 TTC6Q86TZ1 520 aa13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 LPAR1Q92633 364 aa13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 SNRKQ9NRH2 765 aa13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 PRKAG2Q9UGJ0 569 aa13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 DDX20Q9UHI6 824 aaKnown RBP13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 CUL9Q8IWT3 2517 aa13.43□□□□□ -0.26
SNRNP200-207ENST00000493271 DNM1LO00429 736 aa13.42□□□□□ -0.26
SNRNP200-207ENST00000493271 PTPREP23469 700 aa13.42□□□□□ -0.26
SNRNP200-207ENST00000493271 USP5P45974 858 aa13.42□□□□□ -0.26
SNRNP200-207ENST00000493271 CCL14Q16627 93 aa13.42□□□□□ -0.26
SNRNP200-207ENST00000493271 CATSPERGQ6ZRH7 1159 aa13.42□□□□□ -0.26
SNRNP200-207ENST00000493271 SSH3Q8TE77 659 aa13.42□□□□□ -0.26
SNRNP200-207ENST00000493271 DBNDD2Q9BQY9 259 aa13.42□□□□□ -0.26
SNRNP200-207ENST00000493271 CABP5Q9NP86 173 aa13.42□□□□□ -0.26
SNRNP200-207ENST00000493271 CDK5RAP2Q96SN8 1893 aa13.42□□□□□ -0.26
SNRNP200-207ENST00000493271 POTEB2H3BUK9 544 aa13.41□□□□□ -0.26
SNRNP200-207ENST00000493271 STRNO43815 780 aa13.41□□□□□ -0.26
SNRNP200-207ENST00000493271 CYP7A1P22680 504 aa13.41□□□□□ -0.26
SNRNP200-207ENST00000493271 ATP2B2Q01814 1243 aa13.41□□□□□ -0.26
SNRNP200-207ENST00000493271 GRB14Q14449 540 aa13.41□□□□□ -0.26
SNRNP200-207ENST00000493271 SENP6Q9GZR1 1112 aaPredicted RBP13.41□□□□□ -0.26
SNRNP200-207ENST00000493271 SAP30BPQ9UHR5 308 aaKnown RBP13.41□□□□□ -0.26
SNRNP200-207ENST00000493271 PEX10O60683 326 aa13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 SURF6O75683 361 aaKnown RBP13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 CNMDO75829 334 aa13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 VCAM1P19320 739 aa13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 ZAP70P43403 619 aa13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 ATP8B2P98198 1209 aa13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 MDM2Q00987 491 aaPredicted RBP13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 MAP3K12Q12852 859 aa13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 ABCB5Q2M3G0 1257 aa13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 CERKLQ49MI3 558 aaPredicted RBP13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 WDR78Q5VTH9 848 aa13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 POTEEQ6S8J3 1075 aa13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 ARRDC4Q8NCT1 418 aa13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 NOP58Q9Y2X3 529 aaKnown RBP13.4□□□□□ -0.26
SNRNP200-207ENST00000493271 FRMPD3Q5JV73 1810 aa13.39□□□□□ -0.27
SNRNP200-207ENST00000493271 IDH1O75874 414 aaKnown RBP13.39□□□□□ -0.27
SNRNP200-207ENST00000493271 RAB3GAP1Q15042 981 aa13.39□□□□□ -0.27
SNRNP200-207ENST00000493271 OLFML2BQ68BL8 750 aa13.39□□□□□ -0.27
SNRNP200-207ENST00000493271 FRAT1Q92837 279 aaPredicted RBP13.39□□□□□ -0.27
SNRNP200-207ENST00000493271 PIH1D3Q9NQM4 214 aaKnown RBP13.39□□□□□ -0.27
SNRNP200-207ENST00000493271 SLC5A4Q9NY91 659 aa13.39□□□□□ -0.27
SNRNP200-207ENST00000493271 HOXC10Q9NYD6 342 aa13.39□□□□□ -0.27
SNRNP200-207ENST00000493271 ZNF236Q9UL36 1845 aa13.39□□□□□ -0.27
SNRNP200-207ENST00000493271 IGHA2P01877 340 aa13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 CNGA1P29973 690 aa13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 DYNLL1P63167 89 aaKnown RBP13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 ZYXQ15942 572 aaKnown RBP13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 SHROOM1Q2M3G4 852 aaPredicted RBP13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 ZNF697Q5TEC3 545 aa13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 ZKSCAN2Q63HK3 967 aa13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 MB21D1Q8N884 522 aa13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 SHCBP1Q8NEM2 672 aa13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 RPAP3Q9H6T3 665 aaPredicted RBP13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 FLRT1Q9NZU1 646 aa13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 DBNLQ9UJU6 430 aaKnown RBP13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 UNC80Q8N2C7 3258 aa13.38□□□□□ -0.27
SNRNP200-207ENST00000493271 MYH1P12882 1939 aa13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 SPDYE16A6NNV3 312 aaPredicted RBP13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 KBTBD13C9JR72 458 aa13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 CYBAP13498 195 aa13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 COG2Q14746 738 aa13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 DPP9Q86TI2 863 aa13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 ERC1Q8IUD2 1116 aa13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 ABRAQ8N0Z2 381 aa13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 MAGEB6Q8N7X4 407 aa13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 CLUAP1Q96AJ1 413 aa13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 BTBD7Q9P203 1132 aa13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 DNAH12Q6ZR08 3092 aa13.37□□□□□ -0.27
SNRNP200-207ENST00000493271 CCER2I3L3R5 266 aa13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 SEPT4O43236 478 aa13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 CYP2C19P33261 490 aa13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 RTP1P59025 263 aa13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 TTF1Q15361 905 aaPredicted RBP13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 C1orf53Q5VUE5 145 aa13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 TMEM57Q8N5G2 664 aa13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 MIGA1Q8NAN2 632 aa13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 NPLOC4Q8TAT6 608 aa13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 ACER1Q8TDN7 264 aa13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 GUCD1Q96NT3 240 aa13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 MROH8Q9H579 483 aa13.36□□□□□ -0.27
SNRNP200-207ENST00000493271 BCAR3O75815 825 aa13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 POLR3DP05423 398 aaPredicted RBP13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 ADORA2AP29274 412 aa13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 SHMT1P34896 483 aa13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 ATN1P54259 1190 aaPredicted RBP13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 SNX17Q15036 470 aa13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 EAF2Q96CJ1 260 aaPredicted RBP13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 COL25A1Q9BXS0 654 aaPredicted RBP13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 MOV10L1Q9BXT6 1211 aaKnown RBP13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 CRNKL1Q9BZJ0 848 aaKnown RBP13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 SPATC1LQ9H0A9 340 aa13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 SH2D4AQ9H788 454 aa13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 NRBP1Q9UHY1 535 aa13.35□□□□□ -0.27
SNRNP200-207ENST00000493271 NDUFB9Q9Y6M9 179 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms