RNA–Protein interactions for RNA: ENST00000493213.1

CDK16-207, Transcript of cyclin dependent kinase 16, humanhuman

TSL 3

Gene CDK16, Length 866 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK16-207ENST00000493213 NR2E3Q9Y5X4 410 aa12.78□□□□□ -0.36
CDK16-207ENST00000493213 CEP290O15078 2479 aa12.78□□□□□ -0.36
CDK16-207ENST00000493213 FOCADQ5VW36 1801 aa12.77□□□□□ -0.37
CDK16-207ENST00000493213 FAM196BA6NMK8 535 aa12.77□□□□□ -0.37
CDK16-207ENST00000493213 INHAP05111 366 aa12.77□□□□□ -0.37
CDK16-207ENST00000493213 XRCC5P13010 732 aaKnown RBP12.77□□□□□ -0.37
CDK16-207ENST00000493213 CYP7A1P22680 504 aa12.77□□□□□ -0.37
CDK16-207ENST00000493213 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
CDK16-207ENST00000493213 TTC6Q86TZ1 520 aa12.77□□□□□ -0.37
CDK16-207ENST00000493213 MAPKAPK5Q8IW41 473 aa12.77□□□□□ -0.37
CDK16-207ENST00000493213 C12orf42Q96LP6 360 aa12.77□□□□□ -0.37
CDK16-207ENST00000493213 UNC93B1Q9H1C4 597 aa12.77□□□□□ -0.37
CDK16-207ENST00000493213 DNAJC18Q9H819 358 aa12.77□□□□□ -0.37
CDK16-207ENST00000493213 PIH1D3Q9NQM4 214 aaKnown RBP12.77□□□□□ -0.37
CDK16-207ENST00000493213 GJD2Q9UKL4 321 aa12.77□□□□□ -0.37
CDK16-207ENST00000493213 H0YGN5 161 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 FARP2O94887 1054 aaPredicted RBP12.76□□□□□ -0.37
CDK16-207ENST00000493213 MYCP01106 439 aaPredicted RBP12.76□□□□□ -0.37
CDK16-207ENST00000493213 HMGCRP04035 888 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 MAPK4P31152 587 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 FXR1P51114 621 aaKnown RBP eCLIP12.76□□□□□ -0.37
CDK16-207ENST00000493213 MTMR2Q13614 643 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 USP17L2Q6R6M4 530 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 CCDC84Q86UT8 332 aaPredicted RBP12.76□□□□□ -0.37
CDK16-207ENST00000493213 GPRC5AQ8NFJ5 357 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 SOCS4Q8WXH5 440 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 DPF3Q92784 378 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 CCDC8Q9H0W5 538 aaPredicted RBP12.76□□□□□ -0.37
CDK16-207ENST00000493213 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.76□□□□□ -0.37
CDK16-207ENST00000493213 SERPINB13Q9UIV8 391 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 PALD1Q9ULE6 856 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 ZBTB21Q9ULJ3 1066 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 ATAD5Q96QE3 1844 aa12.76□□□□□ -0.37
CDK16-207ENST00000493213 A0A1W2PPC1 479 aa12.75□□□□□ -0.37
CDK16-207ENST00000493213 SIPA1L1O43166 1804 aa12.75□□□□□ -0.37
CDK16-207ENST00000493213 HMMRO75330 724 aa12.75□□□□□ -0.37
CDK16-207ENST00000493213 IDH1O75874 414 aaKnown RBP12.75□□□□□ -0.37
CDK16-207ENST00000493213 USP14P54578 494 aa12.75□□□□□ -0.37
CDK16-207ENST00000493213 HERVK_113P62684 666 aa12.75□□□□□ -0.37
CDK16-207ENST00000493213 DIEXFQ68CQ4 756 aaKnown RBP12.75□□□□□ -0.37
CDK16-207ENST00000493213 RPTORQ8N122 1335 aa12.75□□□□□ -0.37
CDK16-207ENST00000493213 KIF1BPQ96EK5 621 aa12.75□□□□□ -0.37
CDK16-207ENST00000493213 TRIOBPQ9H2D6 2365 aa12.75□□□□□ -0.37
CDK16-207ENST00000493213 C1orf115Q9H7X2 142 aa12.75□□□□□ -0.37
CDK16-207ENST00000493213 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
CDK16-207ENST00000493213 RAB11FIP3O75154 756 aa12.74□□□□□ -0.37
CDK16-207ENST00000493213 TFRCP02786 760 aaKnown RBP12.74□□□□□ -0.37
CDK16-207ENST00000493213 ELNP15502 786 aa12.74□□□□□ -0.37
CDK16-207ENST00000493213 USP5P45974 858 aa12.74□□□□□ -0.37
CDK16-207ENST00000493213 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
CDK16-207ENST00000493213 AACSQ86V21 672 aa12.74□□□□□ -0.37
CDK16-207ENST00000493213 CLASRPQ8N2M8 674 aaKnown RBP12.74□□□□□ -0.37
CDK16-207ENST00000493213 MAGEB6Q8N7X4 407 aa12.74□□□□□ -0.37
CDK16-207ENST00000493213 RHPN1Q8TCX5 695 aa12.74□□□□□ -0.37
CDK16-207ENST00000493213 P2RX7Q99572 595 aaKnown RBP12.74□□□□□ -0.37
CDK16-207ENST00000493213 KIAA1683Q9H0B3 1180 aa12.74□□□□□ -0.37
CDK16-207ENST00000493213 HMX1Q9NP08 348 aaPredicted RBP12.74□□□□□ -0.37
CDK16-207ENST00000493213 TLR7Q9NYK1 1049 aaKnown RBP12.74□□□□□ -0.37
CDK16-207ENST00000493213 DDX19BQ9UMR2 479 aa12.74□□□□□ -0.37
CDK16-207ENST00000493213 USP17L15C9J2P7 530 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 USP17L13C9JLJ4 530 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 USP17L11C9JVI0 530 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 USP17L18D6R9N7 530 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 USP17L22D6RA61 530 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 USP17L17D6RBQ6 530 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 USP17L19D6RCP7 530 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 USP17L20D6RJB6 530 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 DYNLL1P63167 89 aaKnown RBP12.73□□□□□ -0.37
CDK16-207ENST00000493213 JAG1P78504 1218 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 USP17L24Q0WX57 530 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 MAP3K21Q5TCX8 1036 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 DEFB118Q96PH6 123 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 NUDT12Q9BQG2 462 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 RIOK1Q9BRS2 568 aaKnown RBP12.73□□□□□ -0.37
CDK16-207ENST00000493213 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.73□□□□□ -0.37
CDK16-207ENST00000493213 PRO3102Q9H379 93 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 CABP5Q9NP86 173 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 EMILIN3Q9NT22 766 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 RBPJLQ9UBG7 517 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 RABGAP1Q9Y3P9 1069 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 CDK5RAP2Q96SN8 1893 aa12.73□□□□□ -0.37
CDK16-207ENST00000493213 GLRX3O76003 335 aaKnown RBP12.72□□□□□ -0.37
CDK16-207ENST00000493213 GH2P01242 217 aa12.72□□□□□ -0.37
CDK16-207ENST00000493213 ERVK-9P63128 1117 aa12.72□□□□□ -0.37
CDK16-207ENST00000493213 ERVK-24P63145 666 aa12.72□□□□□ -0.37
CDK16-207ENST00000493213 CCNA1P78396 465 aa12.72□□□□□ -0.37
CDK16-207ENST00000493213 PDE3AQ14432 1141 aa12.72□□□□□ -0.37
CDK16-207ENST00000493213 CERKLQ49MI3 558 aaPredicted RBP12.72□□□□□ -0.37
CDK16-207ENST00000493213 NECAB2Q7Z6G3 386 aa12.72□□□□□ -0.37
CDK16-207ENST00000493213 USP6NLQ92738 828 aa12.72□□□□□ -0.37
CDK16-207ENST00000493213 CRNKL1Q9BZJ0 848 aaKnown RBP12.72□□□□□ -0.37
CDK16-207ENST00000493213 ZBTB40Q9NUA8 1239 aa12.72□□□□□ -0.37
CDK16-207ENST00000493213 EXOC6BQ9Y2D4 811 aa12.72□□□□□ -0.37
CDK16-207ENST00000493213 MAGEB6P1A0A0J9YX57 407 aa12.71□□□□□ -0.37
CDK16-207ENST00000493213 GDF11O95390 407 aa12.71□□□□□ -0.37
CDK16-207ENST00000493213 GABPAQ06546 454 aa12.71□□□□□ -0.37
CDK16-207ENST00000493213 ABCB5Q2M3G0 1257 aa12.71□□□□□ -0.37
CDK16-207ENST00000493213 CATSPERGQ6ZRH7 1159 aa12.71□□□□□ -0.37
CDK16-207ENST00000493213 MIGA1Q8NAN2 632 aa12.71□□□□□ -0.37
CDK16-207ENST00000493213 PANK1Q8TE04 598 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms