RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 RESTQ13127 1097 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 SPRYD7Q5W111 196 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 MTERF4Q7Z6M4 381 aaKnown RBP8.17□□□□□ -1.1
HERC4-211ENST00000492996 NKX2-3Q8TAU0 364 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 MS4A4AQ96JQ5 239 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 CRISPLD2Q9H0B8 497 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 NUP62CLQ9H1M0 184 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 RALGAPA2Q2PPJ7 1873 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 WTIPA6NIX2 430 aaPredicted RBP8.16□□□□□ -1.1
HERC4-211ENST00000492996 GOLGA8BA8MQT2 603 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 PDE6AP16499 860 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 ADD2P35612 726 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 NOVP48745 357 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 BCAMP50895 628 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 IRX3P78415 501 aaPredicted RBP8.16□□□□□ -1.1
HERC4-211ENST00000492996 PUM3Q15397 648 aaKnown RBP8.16□□□□□ -1.1
HERC4-211ENST00000492996 PGBD1Q96JS3 809 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 RNF186Q9NXI6 227 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 MCM5P33992 734 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 CBX1P83916 185 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 CCDC144CPQ8IYA2 1237 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 LARGE2Q8N3Y3 721 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 CCDC24Q8N4L8 307 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 SMARCC2Q8TAQ2 1214 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 TRPM4Q8TD43 1214 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 ZSWIM8A7E2V4 1837 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 CXCL11O14625 94 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 CPLX1O14810 134 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 NR1I2O75469 434 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 LETM1O95202 739 aaPredicted RBP8.16□□□□□ -1.1
HERC4-211ENST00000492996 ANTXR2P58335 489 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 TRDNQ13061 729 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 RASGRF1Q13972 1273 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 AOC3Q16853 763 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 UTP14CQ5TAP6 766 aaKnown RBP8.16□□□□□ -1.1
HERC4-211ENST00000492996 FAM109BQ6ICB4 259 aaPredicted RBP8.16□□□□□ -1.1
HERC4-211ENST00000492996 ZNF804AQ7Z570 1209 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 MAGEB6Q8N7X4 407 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 NCOA7Q8NI08 942 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 LPIN2Q92539 896 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 ZNF622Q969S3 477 aaKnown RBP eCLIP8.16□□□□□ -1.1
HERC4-211ENST00000492996 AIDAQ96BJ3 306 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 WNK4Q96J92 1243 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 OSBPL5Q9H0X9 879 aaPredicted RBP8.16□□□□□ -1.1
HERC4-211ENST00000492996 TNMDQ9H2S6 317 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 TOMM22Q9NS69 142 aa8.16□□□□□ -1.1
HERC4-211ENST00000492996 MYO5AQ9Y4I1 1855 aaKnown RBP8.16□□□□□ -1.1
HERC4-211ENST00000492996 ZMYM6O95789 1325 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 B4E1Z4 1266 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 ADCY5O95622 1261 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 POLR3DP05423 398 aaPredicted RBP8.15□□□□□ -1.1
HERC4-211ENST00000492996 USP17L8P0C7I0 530 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 SLC5A1P13866 664 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 EPS15P42566 896 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 HMGN5P82970 282 aaKnown RBP8.15□□□□□ -1.1
HERC4-211ENST00000492996 PPATQ06203 517 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 SPATA5Q8NB90 893 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 PXYLP1Q8TE99 480 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 CD209Q9NNX6 404 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 MORF4L1Q9UBU8 362 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 FDPSP14324 419 aaKnown RBP8.15□□□□□ -1.1
HERC4-211ENST00000492996 TNFAIP1Q13829 316 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 ZSCAN25Q6NSZ9 544 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 TBC1D10CQ8IV04 446 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 MICALL2Q8IY33 904 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 MB21D2Q8IYB1 491 aaPredicted RBP8.15□□□□□ -1.1
HERC4-211ENST00000492996 C2orf69Q8N8R5 385 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 ZNF274Q96GC6 653 aaPredicted RBP8.15□□□□□ -1.1
HERC4-211ENST00000492996 USP28Q96RU2 1077 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 LLPHQ9BRT6 129 aaKnown RBP8.15□□□□□ -1.1
HERC4-211ENST00000492996 AGXT2Q9BYV1 514 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 ARMT1Q9H993 441 aa8.15□□□□□ -1.1
HERC4-211ENST00000492996 MBD4O95243 580 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 CCDC192P0DO97 292 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 IGHMBP2P38935 993 aaKnown RBP8.14□□□□□ -1.11
HERC4-211ENST00000492996 TTF1Q15361 905 aaPredicted RBP8.14□□□□□ -1.11
HERC4-211ENST00000492996 RRP12Q5JTH9 1297 aaKnown RBP8.14□□□□□ -1.11
HERC4-211ENST00000492996 MIGA1Q8NAN2 632 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 ABHD8Q96I13 439 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 MYL10Q9BUA6 226 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 WDR18Q9BV38 432 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 TMX4Q9H1E5 349 aaPredicted RBP8.14□□□□□ -1.11
HERC4-211ENST00000492996 SENP2Q9HC62 589 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 ORC3Q9UBD5 711 aaPredicted RBP8.14□□□□□ -1.11
HERC4-211ENST00000492996 ABCF2Q9UG63 623 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 KIF3AQ9Y496 699 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 A0A087WWV3 80 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 PRKAB2O43741 272 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 UQCRFS1P1P0C7P4 283 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 ADD1P35611 737 aaKnown RBP8.14□□□□□ -1.11
HERC4-211ENST00000492996 CTDSPL2Q05D32 466 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 USP6NLQ92738 828 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 FBXW7Q969H0 707 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 FUCA2Q9BTY2 467 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 NBPF3Q9H094 633 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 ZSCAN16Q9H4T2 348 aaPredicted RBP8.14□□□□□ -1.11
HERC4-211ENST00000492996 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.14□□□□□ -1.11
HERC4-211ENST00000492996 HDAC9Q9UKV0 1011 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 ELP1O95163 1332 aa8.14□□□□□ -1.11
HERC4-211ENST00000492996 TYRO3Q06418 890 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms