RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 ERVK-24P63145 666 aa19.73■□□□□ 0.75
C9orf78-206ENST00000492991 LBX2Q6XYB7 198 aa19.73■□□□□ 0.75
C9orf78-206ENST00000492991 CATSPERGQ6ZRH7 1159 aa19.73■□□□□ 0.75
C9orf78-206ENST00000492991 DPF3Q92784 378 aa19.73■□□□□ 0.75
C9orf78-206ENST00000492991 DEFB118Q96PH6 123 aa19.73■□□□□ 0.75
C9orf78-206ENST00000492991 NUDT12Q9BQG2 462 aa19.73■□□□□ 0.75
C9orf78-206ENST00000492991 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.73■□□□□ 0.75
C9orf78-206ENST00000492991 DCP1AQ9NPI6 582 aaPredicted RBP19.73■□□□□ 0.75
C9orf78-206ENST00000492991 ATP8A2Q9NTI2 1148 aa19.73■□□□□ 0.75
C9orf78-206ENST00000492991 MCM9Q9NXL9 1143 aa19.73■□□□□ 0.75
C9orf78-206ENST00000492991 RPTORQ8N122 1335 aa19.73■□□□□ 0.75
C9orf78-206ENST00000492991 ADD2P35612 726 aa19.72■□□□□ 0.75
C9orf78-206ENST00000492991 RAB3GAP1Q15042 981 aa19.72■□□□□ 0.75
C9orf78-206ENST00000492991 Q3C1V9 767 aa19.72■□□□□ 0.75
C9orf78-206ENST00000492991 ANKLE1Q8NAG6 615 aa19.72■□□□□ 0.75
C9orf78-206ENST00000492991 USP6NLQ92738 828 aa19.72■□□□□ 0.75
C9orf78-206ENST00000492991 FEZ1Q99689 392 aa19.72■□□□□ 0.75
C9orf78-206ENST00000492991 LRRCC1Q9C099 1032 aa19.72■□□□□ 0.75
C9orf78-206ENST00000492991 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.72■□□□□ 0.75
C9orf78-206ENST00000492991 HMX1Q9NP08 348 aaPredicted RBP19.72■□□□□ 0.75
C9orf78-206ENST00000492991 SWAP70Q9UH65 585 aa19.72■□□□□ 0.75
C9orf78-206ENST00000492991 NR2E3Q9Y5X4 410 aa19.72■□□□□ 0.75
C9orf78-206ENST00000492991 GUCY1A2P33402 732 aa19.71■□□□□ 0.75
C9orf78-206ENST00000492991 UBE3CQ15386 1083 aa19.71■□□□□ 0.75
C9orf78-206ENST00000492991 POTEEQ6S8J3 1075 aa19.71■□□□□ 0.75
C9orf78-206ENST00000492991 BOLA2Q9H3K6 86 aa19.71■□□□□ 0.75
C9orf78-206ENST00000492991 COLQQ9Y215 455 aaPredicted RBP19.71■□□□□ 0.75
C9orf78-206ENST00000492991 CCNA1P78396 465 aa19.7■□□□□ 0.74
C9orf78-206ENST00000492991 MAP3K21Q5TCX8 1036 aa19.7■□□□□ 0.74
C9orf78-206ENST00000492991 LCORLQ8N3X6 602 aa19.7■□□□□ 0.74
C9orf78-206ENST00000492991 ACER1Q8TDN7 264 aa19.7■□□□□ 0.74
C9orf78-206ENST00000492991 EDC3Q96F86 508 aaKnown RBP19.7■□□□□ 0.74
C9orf78-206ENST00000492991 DDX60LQ5H9U9 1706 aaKnown RBP19.69■□□□□ 0.74
C9orf78-206ENST00000492991 VCAM1P19320 739 aa19.69■□□□□ 0.74
C9orf78-206ENST00000492991 MORN1Q5T089 497 aa19.69■□□□□ 0.74
C9orf78-206ENST00000492991 ZSCAN25Q6NSZ9 544 aa19.69■□□□□ 0.74
C9orf78-206ENST00000492991 GPR142Q7Z601 462 aa19.69■□□□□ 0.74
C9orf78-206ENST00000492991 PLEKHH3Q7Z736 793 aa19.69■□□□□ 0.74
C9orf78-206ENST00000492991 CCAR1Q8IX12 1150 aaKnown RBP19.69■□□□□ 0.74
C9orf78-206ENST00000492991 SDR42E1Q8WUS8 393 aa19.69■□□□□ 0.74
C9orf78-206ENST00000492991 TRIB2Q92519 343 aa19.69■□□□□ 0.74
C9orf78-206ENST00000492991 PORCNQ9H237 461 aa19.69■□□□□ 0.74
C9orf78-206ENST00000492991 GLRX3O76003 335 aaKnown RBP19.68■□□□□ 0.74
C9orf78-206ENST00000492991 CYP2B6P20813 491 aa19.68■□□□□ 0.74
C9orf78-206ENST00000492991 RGS2P41220 211 aa19.68■□□□□ 0.74
C9orf78-206ENST00000492991 SEPT2Q15019 361 aa19.68■□□□□ 0.74
C9orf78-206ENST00000492991 C20orf194Q5TEA3 1177 aa19.68■□□□□ 0.74
C9orf78-206ENST00000492991 TMEM179Q6ZVK1 233 aa19.68■□□□□ 0.74
C9orf78-206ENST00000492991 CCDC17Q96LX7 622 aa19.68■□□□□ 0.74
C9orf78-206ENST00000492991 PAGR1Q9BTK6 254 aa19.68■□□□□ 0.74
C9orf78-206ENST00000492991 ARMT1Q9H993 441 aa19.68■□□□□ 0.74
C9orf78-206ENST00000492991 HOXC10Q9NYD6 342 aa19.68■□□□□ 0.74
C9orf78-206ENST00000492991 CNMDO75829 334 aa19.67■□□□□ 0.74
C9orf78-206ENST00000492991 ZYXQ15942 572 aaKnown RBP19.67■□□□□ 0.74
C9orf78-206ENST00000492991 NECAB2Q7Z6G3 386 aa19.67■□□□□ 0.74
C9orf78-206ENST00000492991 DCTPP1Q9H773 170 aa19.67■□□□□ 0.74
C9orf78-206ENST00000492991 PLXNB2O15031 1838 aa19.67■□□□□ 0.74
C9orf78-206ENST00000492991 PEX10O60683 326 aa19.66■□□□□ 0.74
C9orf78-206ENST00000492991 MBD4O95243 580 aa19.66■□□□□ 0.74
C9orf78-206ENST00000492991 FXR1P51114 621 aaKnown RBP eCLIP19.66■□□□□ 0.74
C9orf78-206ENST00000492991 C12orf60Q5U649 245 aa19.66■□□□□ 0.74
C9orf78-206ENST00000492991 DDRGK1Q96HY6 314 aa19.66■□□□□ 0.74
C9orf78-206ENST00000492991 RPAP3Q9H6T3 665 aaPredicted RBP19.66■□□□□ 0.74
C9orf78-206ENST00000492991 OGDHLQ9ULD0 1010 aa19.66■□□□□ 0.74
C9orf78-206ENST00000492991 A0A1W2PRG0 241 aa19.65■□□□□ 0.74
C9orf78-206ENST00000492991 SLC15A5A6NIM6 579 aa19.65■□□□□ 0.74
C9orf78-206ENST00000492991 ZKSCAN1P17029 563 aaPredicted RBP19.65■□□□□ 0.74
C9orf78-206ENST00000492991 TRIM32Q13049 653 aa19.65■□□□□ 0.74
C9orf78-206ENST00000492991 MAP2K5Q13163 448 aa19.65■□□□□ 0.74
C9orf78-206ENST00000492991 COG2Q14746 738 aa19.65■□□□□ 0.74
C9orf78-206ENST00000492991 AMOTL1Q8IY63 956 aa19.65■□□□□ 0.74
C9orf78-206ENST00000492991 LPAR1Q92633 364 aa19.65■□□□□ 0.74
C9orf78-206ENST00000492991 PAWRQ96IZ0 340 aaKnown RBP19.65■□□□□ 0.74
C9orf78-206ENST00000492991 APBA2Q99767 749 aa19.65■□□□□ 0.74
C9orf78-206ENST00000492991 ECHDC1Q9NTX5 307 aa19.65■□□□□ 0.74
C9orf78-206ENST00000492991 SPDYE16A6NNV3 312 aaPredicted RBP19.64■□□□□ 0.73
C9orf78-206ENST00000492991 MPHOSPH10O00566 681 aaKnown RBP19.64■□□□□ 0.73
C9orf78-206ENST00000492991 PRKAB2O43741 272 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 EVI5O60447 810 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 HOXC6P09630 235 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 CYP2D6P10635 497 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 PRKAR2AP13861 404 aaKnown RBP19.64■□□□□ 0.73
C9orf78-206ENST00000492991 PTPREP23469 700 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 EVX2Q03828 476 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 NBPF3Q9H094 633 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 PRO3102Q9H379 93 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 SH2D4AQ9H788 454 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 TMX2Q9Y320 296 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 NAV1Q8NEY1 1877 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 TRIOBPQ9H2D6 2365 aa19.64■□□□□ 0.73
C9orf78-206ENST00000492991 USP17L12C9JPN9 530 aa19.63■□□□□ 0.73
C9orf78-206ENST00000492991 USP17L21D6R901 530 aa19.63■□□□□ 0.73
C9orf78-206ENST00000492991 CACNB2Q08289 660 aaPredicted RBP19.63■□□□□ 0.73
C9orf78-206ENST00000492991 C16orf86Q6ZW13 317 aa19.63■□□□□ 0.73
C9orf78-206ENST00000492991 SIAH1Q8IUQ4 282 aa19.63■□□□□ 0.73
C9orf78-206ENST00000492991 MB21D1Q8N884 522 aa19.63■□□□□ 0.73
C9orf78-206ENST00000492991 ARHGEF10LQ9HCE6 1279 aa19.63■□□□□ 0.73
C9orf78-206ENST00000492991 CWC22Q9HCG8 908 aaKnown RBP19.63■□□□□ 0.73
C9orf78-206ENST00000492991 BTBD7Q9P203 1132 aa19.63■□□□□ 0.73
C9orf78-206ENST00000492991 STRNO43815 780 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms