RNA–Protein interactions for RNA: ENST00000492519.1

PABPC4-217, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 2

Gene PABPC4, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-217	ENST00000492519	CCDC74B	Q96LY2	380 aa		4.98	□□□□□ -1.61
PABPC4-217	ENST00000492519	UBL7	Q96S82	380 aa	Predicted RBP	4.98	□□□□□ -1.61
PABPC4-217	ENST00000492519	PHAX	Q9H814	394 aa	Known RBP	4.98	□□□□□ -1.61
PABPC4-217	ENST00000492519	KANSL2	Q9H9L4	492 aa		4.98	□□□□□ -1.61
PABPC4-217	ENST00000492519	LGR6	Q9HBX8	967 aa		4.98	□□□□□ -1.61
PABPC4-217	ENST00000492519	FAM86C1	Q9NVL1	165 aa		4.98	□□□□□ -1.61
PABPC4-217	ENST00000492519	PCOLCE2	Q9UKZ9	415 aa		4.98	□□□□□ -1.61
PABPC4-217	ENST00000492519	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	C9orf172	C9J069	976 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	GAS2	O43903	313 aa	Known RBP	4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	PROC	P04070	461 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	GBP1	P32455	592 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	CAP2	P40123	477 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	IREB2	P48200	963 aa	Known RBP	4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	USP11	P51784	963 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	SLC7A5	Q01650	507 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	MBTPS1	Q14703	1052 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	GNPTAB	Q3T906	1256 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	EGFLAM	Q63HQ2	1017 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	KIAA1211L	Q6NV74	962 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	CDPF1	Q6NVV7	123 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	SPATC1	Q76KD6	591 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	ARMCX6	Q7L4S7	300 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	PPFIBP1	Q86W92	1011 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	CYB5D2	Q8WUJ1	264 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	WFDC12	Q8WWY7	111 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	SLC6A18	Q96N87	628 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	NACC1	Q96RE7	527 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	CEP41	Q9BYV8	373 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	FOXQ1	Q9C009	403 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	ACSS3	Q9H6R3	686 aa		4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	ZNF214	Q9UL59	606 aa	Predicted RBP	4.97	□□□□□ -1.61
PABPC4-217	ENST00000492519	DIAPH1	O60610	1272 aa	Known RBP	4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	APBA3	O96018	575 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	CCNF	P41002	786 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	NRG1	Q02297	640 aa	Predicted RBP	4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	NCAPH	Q15003	741 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	MTERF2	Q49AM1	385 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	SGO2	Q562F6	1265 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	TDRD10	Q5VZ19	366 aa	Known RBP	4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	SH3TC2	Q8TF17	1288 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	PPP1R13L	Q8WUF5	828 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	FBLIM1	Q8WUP2	373 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	FAM46A	Q96IP4	442 aa	Known RBP	4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	SEMA6C	Q9H3T2	930 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	SUCO	Q9UBS9	1254 aa	Known RBP	4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	PFDN2	Q9UHV9	154 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	DAGLA	Q9Y4D2	1042 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	KDM2B	Q8NHM5	1336 aa		4.96	□□□□□ -1.62
PABPC4-217	ENST00000492519	SBNO2	Q9Y2G9	1366 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519		C9IYK1	514 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	RBAK-RBAKDN	I3L0D1	243 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	ENPP3	O14638	875 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	DYNC1LI2	O43237	492 aa	Predicted RBP	4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	SUSD5	O60279	629 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	LRIG2	O94898	1065 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	TP53	P04637	393 aa	Predicted RBP	4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	NFIC	P08651	508 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	PMS1	P54277	932 aa	Known RBP	4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	CHMP4BP1	P59074	171 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	EEPD1	Q7L9B9	569 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	MFSD2A	Q8NA29	543 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	ST13P5	Q8NFI4	369 aa	Predicted RBP	4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	RIN3	Q8TB24	985 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	MEGF10	Q96KG7	1140 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	SPOCK3	Q9BQ16	436 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	ZMYM5	Q9UJ78	669 aa		4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
PABPC4-217	ENST00000492519	ESYT3	A0FGR9	886 aa		4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	CLEC3A	O75596	197 aa		4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	HSD3B2	P26439	372 aa		4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	RXRB	P28702	533 aa		4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	SSRP1	Q08945	709 aa	Known RBP	4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	SQSTM1	Q13501	440 aa		4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	GPAT2	Q6NUI2	795 aa		4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	ARMC10	Q8N2F6	343 aa		4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	DNAJB8	Q8NHS0	232 aa		4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	EZH1	Q92800	747 aa	Predicted RBP	4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	DHRS1	Q96LJ7	313 aa		4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	MIPEP	Q99797	713 aa		4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	CEP131	Q9UPN4	1083 aa		4.94	□□□□□ -1.62
PABPC4-217	ENST00000492519	ANKRD62	A6NC57	917 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	SLITRK5	O94991	958 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	IGHA1	P01876	353 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	BMP3	P12645	472 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	GATA4	P43694	442 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	CDK5R2	Q13319	367 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	SLC10A6	Q3KNW5	377 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	BBS9	Q3SYG4	887 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	C2orf27A	Q580R0	203 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	LETMD1	Q6P1Q0	360 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	SEZ6L2	Q6UXD5	910 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	CDH24	Q86UP0	819 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	TXNRD3	Q86VQ6	643 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	CCDC144CP	Q8IYA2	1237 aa		4.93	□□□□□ -1.62
PABPC4-217	ENST00000492519	DZIP1L	Q8IYY4	767 aa	Known RBP	4.93	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms