RNA–Protein interactions for RNA: ENST00000492451.1

PTPN7-215, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-215ENST00000492451 TRIM17Q9Y577 477 aa16.47■□□□□ 0.23
PTPN7-215ENST00000492451 PABPC4Q13310 644 aaKnown RBP eCLIP16.46■□□□□ 0.23
PTPN7-215ENST00000492451 GPAT2Q6NUI2 795 aa16.46■□□□□ 0.23
PTPN7-215ENST00000492451 TMOD4Q9NZQ9 345 aa16.46■□□□□ 0.23
PTPN7-215ENST00000492451 AGTPBP1Q9UPW5 1226 aa16.46■□□□□ 0.23
PTPN7-215ENST00000492451 FOXP2O15409 715 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 HSPD1P10809 573 aaKnown RBP16.45■□□□□ 0.22
PTPN7-215ENST00000492451 HMGCS2P54868 508 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 SP3Q02447 781 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 MLLT1Q03111 559 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-215ENST00000492451 PDE4BQ07343 736 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 MTMR2Q13614 643 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 SEPT2Q15019 361 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 VPS53Q5VIR6 699 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 USP17L2Q6R6M4 530 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 ZNF589Q86UQ0 364 aaPredicted RBP16.45■□□□□ 0.22
PTPN7-215ENST00000492451 RUFY2Q8WXA3 655 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 PARK7Q99497 189 aaKnown RBP16.45■□□□□ 0.22
PTPN7-215ENST00000492451 FEZ1Q99689 392 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 PPP4R2Q9NY27 417 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 PNMA3Q9UL41 463 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 LOC285556D6RIA3 1793 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 ZMYM6O95789 1325 aa16.45■□□□□ 0.22
PTPN7-215ENST00000492451 SMIM22K7EJ46 135 aa16.44■□□□□ 0.22
PTPN7-215ENST00000492451 TLR2O60603 784 aa16.44■□□□□ 0.22
PTPN7-215ENST00000492451 AKR1B1P15121 316 aa16.44■□□□□ 0.22
PTPN7-215ENST00000492451 GUCY1A2P33402 732 aa16.44■□□□□ 0.22
PTPN7-215ENST00000492451 USP14P54578 494 aa16.44■□□□□ 0.22
PTPN7-215ENST00000492451 PPARAQ07869 468 aa16.44■□□□□ 0.22
PTPN7-215ENST00000492451 ZNF444Q8N0Y2 327 aaPredicted RBP16.44■□□□□ 0.22
PTPN7-215ENST00000492451 ARHGAP39Q9C0H5 1083 aa16.44■□□□□ 0.22
PTPN7-215ENST00000492451 KIAA1683Q9H0B3 1180 aa16.44■□□□□ 0.22
PTPN7-215ENST00000492451 ZSWIM8A7E2V4 1837 aa16.43■□□□□ 0.22
PTPN7-215ENST00000492451 FGAP02671 866 aa16.43■□□□□ 0.22
PTPN7-215ENST00000492451 ERO1AQ96HE7 468 aa16.43■□□□□ 0.22
PTPN7-215ENST00000492451 SH2D4AQ9H788 454 aa16.43■□□□□ 0.22
PTPN7-215ENST00000492451 KANSL2Q9H9L4 492 aa16.43■□□□□ 0.22
PTPN7-215ENST00000492451 ARHGEF10LQ9HCE6 1279 aa16.43■□□□□ 0.22
PTPN7-215ENST00000492451 ANAPC4Q9UJX5 808 aa16.43■□□□□ 0.22
PTPN7-215ENST00000492451 RAD50Q92878 1312 aa16.43■□□□□ 0.22
PTPN7-215ENST00000492451 ADGRA2Q96PE1 1338 aa16.43■□□□□ 0.22
PTPN7-215ENST00000492451 RASA1P20936 1047 aa16.42■□□□□ 0.22
PTPN7-215ENST00000492451 OSBPP22059 807 aa16.42■□□□□ 0.22
PTPN7-215ENST00000492451 CHMLP26374 656 aa16.42■□□□□ 0.22
PTPN7-215ENST00000492451 CTGFP29279 349 aa16.42■□□□□ 0.22
PTPN7-215ENST00000492451 TREML2Q5T2D2 321 aa16.42■□□□□ 0.22
PTPN7-215ENST00000492451 STK11IPQ8N1F8 1099 aa16.42■□□□□ 0.22
PTPN7-215ENST00000492451 C12orf42Q96LP6 360 aa16.42■□□□□ 0.22
PTPN7-215ENST00000492451 EFCC1Q9HA90 598 aa16.42■□□□□ 0.22
PTPN7-215ENST00000492451 PTPN22Q9Y2R2 807 aa16.42■□□□□ 0.22
PTPN7-215ENST00000492451 TNRC18O15417 2968 aaPredicted RBP16.41■□□□□ 0.22
PTPN7-215ENST00000492451 ECM2O94769 699 aaPredicted RBP16.41■□□□□ 0.22
PTPN7-215ENST00000492451 HOXA7P31268 230 aaPredicted RBP16.41■□□□□ 0.22
PTPN7-215ENST00000492451 ICA1Q05084 483 aa16.41■□□□□ 0.22
PTPN7-215ENST00000492451 ARHGEF6Q15052 776 aa16.41■□□□□ 0.22
PTPN7-215ENST00000492451 BMP2KLQ5H9B9 411 aa16.41■□□□□ 0.22
PTPN7-215ENST00000492451 ACER1Q8TDN7 264 aa16.41■□□□□ 0.22
PTPN7-215ENST00000492451 DSCC1Q9BVC3 393 aa16.41■□□□□ 0.22
PTPN7-215ENST00000492451 EMILIN3Q9NT22 766 aa16.41■□□□□ 0.22
PTPN7-215ENST00000492451 CYP2C8P10632 490 aa16.4■□□□□ 0.22
PTPN7-215ENST00000492451 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
PTPN7-215ENST00000492451 C17orf99Q6UX52 265 aa16.4■□□□□ 0.22
PTPN7-215ENST00000492451 SMCR8Q8TEV9 937 aaPredicted RBP16.4■□□□□ 0.22
PTPN7-215ENST00000492451 CPA4Q9UI42 421 aa16.4■□□□□ 0.22
PTPN7-215ENST00000492451 CTNNA3Q9UI47 895 aa16.4■□□□□ 0.22
PTPN7-215ENST00000492451 PRDM1O75626 825 aa16.39■□□□□ 0.21
PTPN7-215ENST00000492451 PCP11498 1178 aaKnown RBP16.39■□□□□ 0.21
PTPN7-215ENST00000492451 IRX3P78415 501 aaPredicted RBP16.39■□□□□ 0.21
PTPN7-215ENST00000492451 CTDSPL2Q05D32 466 aa16.39■□□□□ 0.21
PTPN7-215ENST00000492451 KIF22Q14807 665 aa16.39■□□□□ 0.21
PTPN7-215ENST00000492451 PPP4R3BQ5MIZ7 849 aa16.39■□□□□ 0.21
PTPN7-215ENST00000492451 ASCC2Q9H1I8 757 aaPredicted RBP16.39■□□□□ 0.21
PTPN7-215ENST00000492451 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
PTPN7-215ENST00000492451 TMX2Q9Y320 296 aa16.39■□□□□ 0.21
PTPN7-215ENST00000492451 GREB1LQ9C091 1923 aaPredicted RBP16.39■□□□□ 0.21
PTPN7-215ENST00000492451 A0A1W2PRG0 241 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 USP17L15C9J2P7 530 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 USP17L13C9JLJ4 530 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 USP17L11C9JVI0 530 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 USP17L18D6R9N7 530 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 USP17L22D6RA61 530 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 USP17L17D6RBQ6 530 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 USP17L19D6RCP7 530 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 USP17L20D6RJB6 530 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 ZNF213O14771 459 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 ORC4O43929 436 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 TSPY3P0CV98 308 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 TSPY8P0CW00 308 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 EEF2P13639 858 aaKnown RBP16.38■□□□□ 0.21
PTPN7-215ENST00000492451 GCLCP48506 637 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-215ENST00000492451 LACTBP83111 547 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-215ENST00000492451 USP17L24Q0WX57 530 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 SIAH1Q8IUQ4 282 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 NEDD1Q8NHV4 660 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 LPAR1Q92633 364 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.38■□□□□ 0.21
PTPN7-215ENST00000492451 RNF41Q9H4P4 317 aaPredicted RBP16.38■□□□□ 0.21
PTPN7-215ENST00000492451 NYAP2Q9P242 653 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 PTCH2Q9Y6C5 1203 aa16.38■□□□□ 0.21
PTPN7-215ENST00000492451 POTEFA5A3E0 1075 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms