RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 KRT222Q8N1A0 295 aa18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 EPSTI1Q96J88 318 aa18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 PARP3Q9Y6F1 533 aa18.41■□□□□ 0.54
SEMA4D-220ENST00000492386 hCG_1642624A0A1W2PR95 340 aa18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 PRDM1O75626 825 aa18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 PLEKHA8P1O95397 391 aa18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 KRT2P35908 639 aa18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 ADKP55263 362 aaKnown RBP18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 NR1I3Q14994 352 aa18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 DHX58Q96C10 678 aa18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 CDC5LQ99459 802 aaKnown RBP18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 WNT7AO00755 349 aa18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 XBP1P17861 261 aa18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 DYNLL1P63167 89 aaKnown RBP18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 SH3RF1Q7Z6J0 888 aa18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 BRIP1Q9BX63 1249 aa18.4■□□□□ 0.54
SEMA4D-220ENST00000492386 A0A1B0GTH6 734 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 FGRP09769 529 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 SLFN14P0C7P3 912 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 TOGARAM2Q6ZUX3 1019 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 APTXQ7Z2E3 356 aaKnown RBP18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 ZNF384Q8TF68 577 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 SRRTQ9BXP5 876 aaKnown RBP18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 GNL3LQ9NVN8 582 aaKnown RBP18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 V9GY48 417 aaPredicted RBP18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 IGSF3O75054 1194 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 TROAPQ12815 778 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 NPY5RQ15761 445 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 ARHGAP29Q52LW3 1261 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 IFIT1BQ5T764 474 aaKnown RBP18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 CATIPQ7Z7H3 387 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 TNFRSF25Q93038 417 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 ACSBG1Q96GR2 724 aa18.39■□□□□ 0.53
SEMA4D-220ENST00000492386 A0A0G2JS52 829 aa18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 URI1O94763 535 aaPredicted RBP18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 CT47A1Q5JQC4 288 aaPredicted RBP18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 C3orf67Q6ZVT6 689 aa18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 SYMPKQ92797 1274 aaKnown RBP18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 PAGE5Q96GU1 130 aa18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 RBM28Q9NW13 759 aaKnown RBP18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 TADA3O75528 432 aa18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 CD44P16070 742 aaKnown RBP18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 AFMP43652 599 aa18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 CLCN6P51797 869 aa18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 CUL4BQ13620 913 aa18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 UBE4AQ14139 1066 aa18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 NOM1Q5C9Z4 860 aaKnown RBP18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 FERMT2Q96AC1 680 aa18.38■□□□□ 0.53
SEMA4D-220ENST00000492386 GOLGA6L9A6NEM1 432 aa18.37■□□□□ 0.53
SEMA4D-220ENST00000492386 WDR24Q96S15 920 aa18.37■□□□□ 0.53
SEMA4D-220ENST00000492386 KIF20AO95235 890 aa18.37■□□□□ 0.53
SEMA4D-220ENST00000492386 CASP1P29466 404 aa18.37■□□□□ 0.53
SEMA4D-220ENST00000492386 DPYDQ12882 1025 aa18.37■□□□□ 0.53
SEMA4D-220ENST00000492386 SPATA1Q5VX52 437 aa18.37■□□□□ 0.53
SEMA4D-220ENST00000492386 CTR9Q6PD62 1173 aa18.37■□□□□ 0.53
SEMA4D-220ENST00000492386 TMTC3Q6ZXV5 915 aa18.37■□□□□ 0.53
SEMA4D-220ENST00000492386 ANKRD18AQ8IVF6 992 aa18.37■□□□□ 0.53
SEMA4D-220ENST00000492386 UBXN4Q92575 508 aa18.37■□□□□ 0.53
SEMA4D-220ENST00000492386 MYH13Q9UKX3 1938 aa18.36■□□□□ 0.53
SEMA4D-220ENST00000492386 BMP15O95972 392 aa18.36■□□□□ 0.53
SEMA4D-220ENST00000492386 ERFEQ4G0M1 354 aa18.36■□□□□ 0.53
SEMA4D-220ENST00000492386 IQCA1Q86XH1 822 aa18.36■□□□□ 0.53
SEMA4D-220ENST00000492386 FAM177A1Q8N128 213 aaPredicted RBP18.36■□□□□ 0.53
SEMA4D-220ENST00000492386 CCDC34Q96HJ3 373 aa18.36■□□□□ 0.53
SEMA4D-220ENST00000492386 CARD6Q9BX69 1037 aa18.36■□□□□ 0.53
SEMA4D-220ENST00000492386 TEX33O43247 280 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 DDAH1O94760 285 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 CALM1P0DP23 149 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 CALM2P0DP24 149 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 CALM3P0DP25 149 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 PCP11498 1178 aaKnown RBP18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 DDB1Q16531 1140 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 CDKAL1Q5VV42 579 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 MNS1Q8NEH6 495 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 FAM84BQ96KN1 310 aaPredicted RBP18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 CDCA7Q9BWT1 371 aaPredicted RBP18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 BSDC1Q9NW68 430 aaPredicted RBP18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 CNTNAP5Q8WYK1 1306 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 SYNRGQ9UMZ2 1314 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 COL5A3P25940 1745 aaPredicted RBP18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 LAMB1P07942 1786 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 EFCAB8A8MWE9 144 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 GNG11P61952 73 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 SF3B3Q15393 1217 aaKnown RBP18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 ZNF174Q15697 407 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 MARCH10Q8NA82 808 aaPredicted RBP18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 GSDMAQ96QA5 445 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 FHOD1Q9Y613 1164 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 ROBO1Q9Y6N7 1651 aa18.35■□□□□ 0.53
SEMA4D-220ENST00000492386 PPP1R3GB7ZBB8 358 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 PBX1P40424 430 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 MAP3K9P80192 1104 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 EVX2Q03828 476 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 CAVIN4Q5BKX8 364 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 TTC38Q5R3I4 469 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 KLHL10Q6JEL2 608 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 KIFC2Q96AC6 838 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 PANX2Q96RD6 677 aa18.34■□□□□ 0.53
SEMA4D-220ENST00000492386 MINPP1Q9UNW1 487 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms