RNA–Protein interactions for RNA: ENST00000492235.1

TREX1-204, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3

Gene TREX1, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-204ENST00000492235 USP17L22D6RA61 530 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 USP17L17D6RBQ6 530 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 USP17L19D6RCP7 530 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 USP17L20D6RJB6 530 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 BCAR3O75815 825 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 CCNA1P78396 465 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 USP17L24Q0WX57 530 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 POLA2Q14181 598 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 RAB3GAP1Q15042 981 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 MFSD14CQ5VZR4 134 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 C12orf42Q96LP6 360 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 SENP6Q9GZR1 1112 aaPredicted RBP15.27■□□□□ 0.04
TREX1-204ENST00000492235 FLRT1Q9NZU1 646 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 RABGAP1Q9Y3P9 1069 aa15.27■□□□□ 0.04
TREX1-204ENST00000492235 SURF6O75683 361 aaKnown RBP15.26■□□□□ 0.03
TREX1-204ENST00000492235 IDH1O75874 414 aaKnown RBP15.26■□□□□ 0.03
TREX1-204ENST00000492235 GLRX3O76003 335 aaKnown RBP15.26■□□□□ 0.03
TREX1-204ENST00000492235 CNGA1P29973 690 aa15.26■□□□□ 0.03
TREX1-204ENST00000492235 USP5P45974 858 aa15.26■□□□□ 0.03
TREX1-204ENST00000492235 TMEM57Q8N5G2 664 aa15.26■□□□□ 0.03
TREX1-204ENST00000492235 ZNF512BQ96KM6 892 aaPredicted RBP15.26■□□□□ 0.03
TREX1-204ENST00000492235 TLR7Q9NYK1 1049 aaKnown RBP15.26■□□□□ 0.03
TREX1-204ENST00000492235 SLC15A5A6NIM6 579 aa15.25■□□□□ 0.03
TREX1-204ENST00000492235 VCAM1P19320 739 aa15.25■□□□□ 0.03
TREX1-204ENST00000492235 PTPREP23469 700 aa15.25■□□□□ 0.03
TREX1-204ENST00000492235 ATN1P54259 1190 aaPredicted RBP15.25■□□□□ 0.03
TREX1-204ENST00000492235 TATDN1Q6P1N9 297 aa15.25■□□□□ 0.03
TREX1-204ENST00000492235 CATSPERGQ6ZRH7 1159 aa15.25■□□□□ 0.03
TREX1-204ENST00000492235 MAGEB6Q8N7X4 407 aa15.25■□□□□ 0.03
TREX1-204ENST00000492235 ACER1Q8TDN7 264 aa15.25■□□□□ 0.03
TREX1-204ENST00000492235 SSH3Q8TE77 659 aa15.25■□□□□ 0.03
TREX1-204ENST00000492235 COL25A1Q9BXS0 654 aaPredicted RBP15.25■□□□□ 0.03
TREX1-204ENST00000492235 CCDC8Q9H0W5 538 aaPredicted RBP15.25■□□□□ 0.03
TREX1-204ENST00000492235 C1orf115Q9H7X2 142 aa15.25■□□□□ 0.03
TREX1-204ENST00000492235 BTBD7Q9P203 1132 aa15.25■□□□□ 0.03
TREX1-204ENST00000492235 SERPINB13Q9UIV8 391 aa15.25■□□□□ 0.03
TREX1-204ENST00000492235 DBNLQ9UJU6 430 aaKnown RBP15.25■□□□□ 0.03
TREX1-204ENST00000492235 USP14P54578 494 aa15.24■□□□□ 0.03
TREX1-204ENST00000492235 ATP8B2P98198 1209 aa15.24■□□□□ 0.03
TREX1-204ENST00000492235 ATP2B2Q01814 1243 aa15.24■□□□□ 0.03
TREX1-204ENST00000492235 ABCB5Q2M3G0 1257 aa15.24■□□□□ 0.03
TREX1-204ENST00000492235 CERKLQ49MI3 558 aaPredicted RBP15.24■□□□□ 0.03
TREX1-204ENST00000492235 NPLOC4Q8TAT6 608 aa15.24■□□□□ 0.03
TREX1-204ENST00000492235 LBHD1Q9BQE6 289 aaPredicted RBP15.24■□□□□ 0.03
TREX1-204ENST00000492235 KIAA1683Q9H0B3 1180 aa15.24■□□□□ 0.03
TREX1-204ENST00000492235 DDX20Q9UHI6 824 aaKnown RBP15.24■□□□□ 0.03
TREX1-204ENST00000492235 IVNS1ABPQ9Y6Y0 642 aa15.24■□□□□ 0.03
TREX1-204ENST00000492235 IGSF3O75054 1194 aa15.23■□□□□ 0.03
TREX1-204ENST00000492235 CYP2C19P33261 490 aa15.23■□□□□ 0.03
TREX1-204ENST00000492235 GRB14Q14449 540 aa15.23■□□□□ 0.03
TREX1-204ENST00000492235 FAM161BQ96MY7 647 aa15.23■□□□□ 0.03
TREX1-204ENST00000492235 EHD4Q9H223 541 aa15.23■□□□□ 0.03
TREX1-204ENST00000492235 RPAP3Q9H6T3 665 aaPredicted RBP15.23■□□□□ 0.03
TREX1-204ENST00000492235 DNAH12Q6ZR08 3092 aa15.23■□□□□ 0.03
TREX1-204ENST00000492235 SPDYE16A6NNV3 312 aaPredicted RBP15.22■□□□□ 0.03
TREX1-204ENST00000492235 MSCO60682 206 aa15.22■□□□□ 0.03
TREX1-204ENST00000492235 SHMT1P34896 483 aa15.22■□□□□ 0.03
TREX1-204ENST00000492235 LBX2Q6XYB7 198 aa15.22■□□□□ 0.03
TREX1-204ENST00000492235 TTC6Q86TZ1 520 aa15.22■□□□□ 0.03
TREX1-204ENST00000492235 CERS3Q8IU89 383 aa15.22■□□□□ 0.03
TREX1-204ENST00000492235 TRPV1Q8NER1 839 aa15.22■□□□□ 0.03
TREX1-204ENST00000492235 LPAR1Q92633 364 aa15.22■□□□□ 0.03
TREX1-204ENST00000492235 EAF2Q96CJ1 260 aaPredicted RBP15.22■□□□□ 0.03
TREX1-204ENST00000492235 ANTXR1Q9H6X2 564 aa15.22■□□□□ 0.03
TREX1-204ENST00000492235 CABP5Q9NP86 173 aa15.22■□□□□ 0.03
TREX1-204ENST00000492235 UNC80Q8N2C7 3258 aa15.21■□□□□ 0.03
TREX1-204ENST00000492235 POTEB2H3BUK9 544 aa15.21■□□□□ 0.03
TREX1-204ENST00000492235 DNM1LO00429 736 aa15.21■□□□□ 0.03
TREX1-204ENST00000492235 HOXC6P09630 235 aa15.21■□□□□ 0.03
TREX1-204ENST00000492235 PLCD1P51178 756 aa15.21■□□□□ 0.03
TREX1-204ENST00000492235 RTP1P59025 263 aa15.21■□□□□ 0.03
TREX1-204ENST00000492235 ZKSCAN2Q63HK3 967 aa15.21■□□□□ 0.03
TREX1-204ENST00000492235 GUCD1Q96NT3 240 aa15.21■□□□□ 0.03
TREX1-204ENST00000492235 PRKAG2Q9UGJ0 569 aa15.21■□□□□ 0.03
TREX1-204ENST00000492235 LTBP2Q14767 1821 aa15.21■□□□□ 0.03
TREX1-204ENST00000492235 NAV1Q8NEY1 1877 aa15.2■□□□□ 0.02
TREX1-204ENST00000492235 GUCY1A2P33402 732 aa15.2■□□□□ 0.02
TREX1-204ENST00000492235 MAP3K12Q12852 859 aa15.2■□□□□ 0.02
TREX1-204ENST00000492235 SEPT2Q15019 361 aa15.2■□□□□ 0.02
TREX1-204ENST00000492235 GJC2Q5T442 439 aaPredicted RBP15.2■□□□□ 0.02
TREX1-204ENST00000492235 ANO1Q5XXA6 986 aa15.2■□□□□ 0.02
TREX1-204ENST00000492235 FAM109BQ6ICB4 259 aaPredicted RBP15.2■□□□□ 0.02
TREX1-204ENST00000492235 DPP9Q86TI2 863 aa15.2■□□□□ 0.02
TREX1-204ENST00000492235 ATP11BQ9Y2G3 1177 aa15.2■□□□□ 0.02
TREX1-204ENST00000492235 NOP58Q9Y2X3 529 aaKnown RBP15.2■□□□□ 0.02
TREX1-204ENST00000492235 RLFQ13129 1914 aa15.19■□□□□ 0.02
TREX1-204ENST00000492235 MPHOSPH10O00566 681 aaKnown RBP15.19■□□□□ 0.02
TREX1-204ENST00000492235 POLR3DP05423 398 aaPredicted RBP15.19■□□□□ 0.02
TREX1-204ENST00000492235 CYBAP13498 195 aa15.19■□□□□ 0.02
TREX1-204ENST00000492235 ADORA2AP29274 412 aa15.19■□□□□ 0.02
TREX1-204ENST00000492235 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.19■□□□□ 0.02
TREX1-204ENST00000492235 MOV10L1Q9BXT6 1211 aaKnown RBP15.19■□□□□ 0.02
TREX1-204ENST00000492235 ZNF236Q9UL36 1845 aa15.18■□□□□ 0.02
TREX1-204ENST00000492235 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
TREX1-204ENST00000492235 EVX2Q03828 476 aa15.18■□□□□ 0.02
TREX1-204ENST00000492235 COG2Q14746 738 aa15.18■□□□□ 0.02
TREX1-204ENST00000492235 ZNF697Q5TEC3 545 aa15.18■□□□□ 0.02
TREX1-204ENST00000492235 ARRDC4Q8NCT1 418 aa15.18■□□□□ 0.02
TREX1-204ENST00000492235 RIOK1Q9BRS2 568 aaKnown RBP15.18■□□□□ 0.02
TREX1-204ENST00000492235 TANGO6Q9C0B7 1094 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms