RNA–Protein interactions for RNA: ENST00000491607.5

SMIM4-205, Transcript of small integral membrane protein 4, humanhuman

TSL 3

Gene SMIM4, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-205ENST00000491607 C12orf42Q96LP6 360 aa22.22■■□□□ 1.15
SMIM4-205ENST00000491607 DCP1AQ9NPI6 582 aaPredicted RBP22.22■■□□□ 1.15
SMIM4-205ENST00000491607 PAK6Q9NQU5 681 aaPredicted RBP22.22■■□□□ 1.15
SMIM4-205ENST00000491607 USP17L15C9J2P7 530 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 USP17L13C9JLJ4 530 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 USP17L11C9JVI0 530 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 USP17L18D6R9N7 530 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 USP17L22D6RA61 530 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 USP17L17D6RBQ6 530 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 USP17L19D6RCP7 530 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 USP17L20D6RJB6 530 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 CYP2B6P20813 491 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 ADD2P35612 726 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 USP17L24Q0WX57 530 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 SLFNL1Q499Z3 407 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 HAUS7Q99871 368 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 KIAA1683Q9H0B3 1180 aa22.21■■□□□ 1.15
SMIM4-205ENST00000491607 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.21■■□□□ 1.15
SMIM4-205ENST00000491607 CWC22Q9HCG8 908 aaKnown RBP22.21■■□□□ 1.15
SMIM4-205ENST00000491607 SMARCA5O60264 1052 aaPredicted RBP22.2■■□□□ 1.14
SMIM4-205ENST00000491607 MBD4O95243 580 aa22.2■■□□□ 1.14
SMIM4-205ENST00000491607 CYP2D6P10635 497 aa22.2■■□□□ 1.14
SMIM4-205ENST00000491607 VCAM1P19320 739 aa22.2■■□□□ 1.14
SMIM4-205ENST00000491607 MAPK4P31152 587 aa22.2■■□□□ 1.14
SMIM4-205ENST00000491607 GABPAQ06546 454 aa22.2■■□□□ 1.14
SMIM4-205ENST00000491607 SEPT2Q15019 361 aa22.2■■□□□ 1.14
SMIM4-205ENST00000491607 Q3C1V9 767 aa22.2■■□□□ 1.14
SMIM4-205ENST00000491607 SOCS4Q8WXH5 440 aa22.2■■□□□ 1.14
SMIM4-205ENST00000491607 NUDT12Q9BQG2 462 aa22.2■■□□□ 1.14
SMIM4-205ENST00000491607 COLQQ9Y215 455 aaPredicted RBP22.2■■□□□ 1.14
SMIM4-205ENST00000491607 PRKAB2O43741 272 aa22.19■■□□□ 1.14
SMIM4-205ENST00000491607 TRIM32Q13049 653 aa22.19■■□□□ 1.14
SMIM4-205ENST00000491607 PORCNQ9H237 461 aa22.19■■□□□ 1.14
SMIM4-205ENST00000491607 GUCY1A2P33402 732 aa22.18■■□□□ 1.14
SMIM4-205ENST00000491607 CATSPERGQ6ZRH7 1159 aa22.18■■□□□ 1.14
SMIM4-205ENST00000491607 GPR142Q7Z601 462 aa22.18■■□□□ 1.14
SMIM4-205ENST00000491607 TRIB2Q92519 343 aa22.18■■□□□ 1.14
SMIM4-205ENST00000491607 HMX1Q9NP08 348 aaPredicted RBP22.18■■□□□ 1.14
SMIM4-205ENST00000491607 RPTORQ8N122 1335 aa22.17■■□□□ 1.14
SMIM4-205ENST00000491607 CHGBP05060 677 aa22.17■■□□□ 1.14
SMIM4-205ENST00000491607 CAPN2P17655 700 aa22.17■■□□□ 1.14
SMIM4-205ENST00000491607 POTEEQ6S8J3 1075 aa22.17■■□□□ 1.14
SMIM4-205ENST00000491607 AMOTL1Q8IY63 956 aa22.17■■□□□ 1.14
SMIM4-205ENST00000491607 SLC44A5Q8NCS7 719 aa22.17■■□□□ 1.14
SMIM4-205ENST00000491607 DYNLL2Q96FJ2 89 aa22.17■■□□□ 1.14
SMIM4-205ENST00000491607 CRISPLD2Q9H0B8 497 aa22.17■■□□□ 1.14
SMIM4-205ENST00000491607 RPAP3Q9H6T3 665 aaPredicted RBP22.17■■□□□ 1.14
SMIM4-205ENST00000491607 ATP8A2Q9NTI2 1148 aa22.17■■□□□ 1.14
SMIM4-205ENST00000491607 SWAP70Q9UH65 585 aa22.17■■□□□ 1.14
SMIM4-205ENST00000491607 RABGAP1Q9Y3P9 1069 aa22.17■■□□□ 1.14
SMIM4-205ENST00000491607 CCNA1P78396 465 aa22.16■■□□□ 1.14
SMIM4-205ENST00000491607 UBE3CQ15386 1083 aa22.16■■□□□ 1.14
SMIM4-205ENST00000491607 WDR78Q5VTH9 848 aa22.16■■□□□ 1.14
SMIM4-205ENST00000491607 ZSCAN25Q6NSZ9 544 aa22.16■■□□□ 1.14
SMIM4-205ENST00000491607 PLEKHH3Q7Z736 793 aa22.16■■□□□ 1.14
SMIM4-205ENST00000491607 DDRGK1Q96HY6 314 aa22.16■■□□□ 1.14
SMIM4-205ENST00000491607 PLXNB2O15031 1838 aa22.15■■□□□ 1.14
SMIM4-205ENST00000491607 DOCK3Q8IZD9 2030 aa22.15■■□□□ 1.14
SMIM4-205ENST00000491607 CNMDO75829 334 aa22.15■■□□□ 1.14
SMIM4-205ENST00000491607 ZKSCAN1P17029 563 aaPredicted RBP22.15■■□□□ 1.14
SMIM4-205ENST00000491607 RGS2P41220 211 aa22.15■■□□□ 1.14
SMIM4-205ENST00000491607 CHRDL2Q6WN34 429 aa22.15■■□□□ 1.14
SMIM4-205ENST00000491607 PAWRQ96IZ0 340 aaKnown RBP22.15■■□□□ 1.14
SMIM4-205ENST00000491607 NR2E3Q9Y5X4 410 aa22.15■■□□□ 1.14
SMIM4-205ENST00000491607 SLC4A4Q9Y6R1 1079 aa22.15■■□□□ 1.14
SMIM4-205ENST00000491607 A0A1W2PRG0 241 aa22.14■■□□□ 1.13
SMIM4-205ENST00000491607 XRCC5P13010 732 aaKnown RBP22.14■■□□□ 1.13
SMIM4-205ENST00000491607 PRKAR2AP13861 404 aaKnown RBP22.14■■□□□ 1.13
SMIM4-205ENST00000491607 TMEM179Q6ZVK1 233 aa22.14■■□□□ 1.13
SMIM4-205ENST00000491607 TRMT44Q8IYL2 757 aaKnown RBP22.14■■□□□ 1.13
SMIM4-205ENST00000491607 ECHDC1Q9NTX5 307 aa22.14■■□□□ 1.13
SMIM4-205ENST00000491607 CYP2D7A0A087X1C5 515 aa22.13■■□□□ 1.13
SMIM4-205ENST00000491607 EVI5O60447 810 aa22.13■■□□□ 1.13
SMIM4-205ENST00000491607 GLRX3O76003 335 aaKnown RBP22.13■■□□□ 1.13
SMIM4-205ENST00000491607 MORN1Q5T089 497 aa22.13■■□□□ 1.13
SMIM4-205ENST00000491607 NECAB2Q7Z6G3 386 aa22.13■■□□□ 1.13
SMIM4-205ENST00000491607 DIS3LQ8TF46 1054 aaKnown RBP22.13■■□□□ 1.13
SMIM4-205ENST00000491607 GPATCH3Q96I76 525 aa22.13■■□□□ 1.13
SMIM4-205ENST00000491607 TANGO6Q9C0B7 1094 aa22.13■■□□□ 1.13
SMIM4-205ENST00000491607 SPDYE16A6NNV3 312 aaPredicted RBP22.12■■□□□ 1.13
SMIM4-205ENST00000491607 USP17L12C9JPN9 530 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 USP17L21D6R901 530 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 AKR1B1P15121 316 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 CCL14Q16627 93 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 C12orf60Q5U649 245 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 LBX2Q6XYB7 198 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 USP6NLQ92738 828 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 APBA2Q99767 749 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 PUS7LQ9H0K6 701 aaKnown RBP22.12■■□□□ 1.13
SMIM4-205ENST00000491607 DCTPP1Q9H773 170 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 ARHGEF10LQ9HCE6 1279 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 BTBD7Q9P203 1132 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 PCDH10Q9P2E7 1040 aa22.12■■□□□ 1.13
SMIM4-205ENST00000491607 ICA1Q05084 483 aa22.11■■□□□ 1.13
SMIM4-205ENST00000491607 MAP3K21Q5TCX8 1036 aa22.11■■□□□ 1.13
SMIM4-205ENST00000491607 CLEC10AQ8IUN9 316 aa22.11■■□□□ 1.13
SMIM4-205ENST00000491607 ANKLE1Q8NAG6 615 aa22.11■■□□□ 1.13
SMIM4-205ENST00000491607 SMIM22K7EJ46 135 aa22.1■■□□□ 1.13
SMIM4-205ENST00000491607 CDK8P49336 464 aa22.1■■□□□ 1.13
SMIM4-205ENST00000491607 FXR1P51114 621 aaKnown RBP eCLIP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms