RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 GJB1P08034 283 aa10.81□□□□□ -0.68
HDAC3-211ENST00000491581 ADD2P35612 726 aa10.81□□□□□ -0.68
HDAC3-211ENST00000491581 IRX3P78415 501 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-211ENST00000491581 GABPAQ06546 454 aa10.81□□□□□ -0.68
HDAC3-211ENST00000491581 ABCB5Q2M3G0 1257 aa10.81□□□□□ -0.68
HDAC3-211ENST00000491581 CERKLQ49MI3 558 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-211ENST00000491581 SLAIN1Q8ND83 568 aa10.81□□□□□ -0.68
HDAC3-211ENST00000491581 DCP1AQ9NPI6 582 aaPredicted RBP10.81□□□□□ -0.68
HDAC3-211ENST00000491581 PAG1Q9NWQ8 432 aa10.81□□□□□ -0.68
HDAC3-211ENST00000491581 MCM9Q9NXL9 1143 aa10.81□□□□□ -0.68
HDAC3-211ENST00000491581 TMOD4Q9NZQ9 345 aa10.81□□□□□ -0.68
HDAC3-211ENST00000491581 BTBD7Q9P203 1132 aa10.81□□□□□ -0.68
HDAC3-211ENST00000491581 A0A0G2JMZ2 1700 aa10.81□□□□□ -0.68
HDAC3-211ENST00000491581 MPHOSPH10O00566 681 aaKnown RBP10.8□□□□□ -0.68
HDAC3-211ENST00000491581 SGPL1O95470 568 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 AKR1B1P15121 316 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 VCAM1P19320 739 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 KCNA4P22459 653 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 SIAH1Q8IUQ4 282 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 DPF3Q92784 378 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 COA7Q96BR5 231 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 FEZ1Q99689 392 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 PUS7LQ9H0K6 701 aaKnown RBP10.8□□□□□ -0.68
HDAC3-211ENST00000491581 FLRT1Q9NZU1 646 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 MORF4L1Q9UBU8 362 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 PNMA3Q9UL41 463 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 PCDHB15Q9Y5E8 787 aa10.8□□□□□ -0.68
HDAC3-211ENST00000491581 FARP2O94887 1054 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-211ENST00000491581 TFRCP02786 760 aaKnown RBP10.79□□□□□ -0.68
HDAC3-211ENST00000491581 ATP5JP18859 108 aa10.79□□□□□ -0.68
HDAC3-211ENST00000491581 CCND3P30281 292 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-211ENST00000491581 HOXA7P31268 230 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-211ENST00000491581 MNX1P50219 401 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-211ENST00000491581 ERVK-9P63128 1117 aa10.79□□□□□ -0.68
HDAC3-211ENST00000491581 ERVK-24P63145 666 aa10.79□□□□□ -0.68
HDAC3-211ENST00000491581 UBXN2AP68543 259 aa10.79□□□□□ -0.68
HDAC3-211ENST00000491581 IRF5Q13568 498 aa10.79□□□□□ -0.68
HDAC3-211ENST00000491581 USP17L2Q6R6M4 530 aa10.79□□□□□ -0.68
HDAC3-211ENST00000491581 SPICE1Q8N0Z3 855 aa10.79□□□□□ -0.68
HDAC3-211ENST00000491581 PAWRQ96IZ0 340 aaKnown RBP10.79□□□□□ -0.68
HDAC3-211ENST00000491581 HAUS7Q99871 368 aa10.79□□□□□ -0.68
HDAC3-211ENST00000491581 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.79□□□□□ -0.68
HDAC3-211ENST00000491581 RPAP3Q9H6T3 665 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-211ENST00000491581 PAK6Q9NQU5 681 aaPredicted RBP10.79□□□□□ -0.68
HDAC3-211ENST00000491581 C19orf81C9J6K1 198 aa10.78□□□□□ -0.68
HDAC3-211ENST00000491581 RAB11FIP3O75154 756 aa10.78□□□□□ -0.68
HDAC3-211ENST00000491581 HMMRO75330 724 aa10.78□□□□□ -0.68
HDAC3-211ENST00000491581 GCLCP48506 637 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-211ENST00000491581 HSP90AB4PQ58FF6 505 aa10.78□□□□□ -0.68
HDAC3-211ENST00000491581 WDR78Q5VTH9 848 aa10.78□□□□□ -0.68
HDAC3-211ENST00000491581 GPR142Q7Z601 462 aa10.78□□□□□ -0.68
HDAC3-211ENST00000491581 GPRC5AQ8NFJ5 357 aa10.78□□□□□ -0.68
HDAC3-211ENST00000491581 PXYLP1Q8TE99 480 aa10.78□□□□□ -0.68
HDAC3-211ENST00000491581 CHMP4CQ96CF2 233 aa10.78□□□□□ -0.68
HDAC3-211ENST00000491581 YTHDC1Q96MU7 727 aaKnown RBP10.78□□□□□ -0.68
HDAC3-211ENST00000491581 SEC62Q99442 399 aaKnown RBP10.78□□□□□ -0.68
HDAC3-211ENST00000491581 CRNKL1Q9BZJ0 848 aaKnown RBP10.78□□□□□ -0.68
HDAC3-211ENST00000491581 LRRCC1Q9C099 1032 aa10.78□□□□□ -0.68
HDAC3-211ENST00000491581 EHD4Q9H223 541 aa10.78□□□□□ -0.68
HDAC3-211ENST00000491581 RBM27Q9P2N5 1060 aaKnown RBP10.78□□□□□ -0.68
HDAC3-211ENST00000491581 GREB1LQ9C091 1923 aaPredicted RBP10.78□□□□□ -0.68
HDAC3-211ENST00000491581 SPDYE16A6NNV3 312 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-211ENST00000491581 USP17L12C9JPN9 530 aa10.77□□□□□ -0.69
HDAC3-211ENST00000491581 USP17L21D6R901 530 aa10.77□□□□□ -0.69
HDAC3-211ENST00000491581 M0R2C6 588 aa10.77□□□□□ -0.69
HDAC3-211ENST00000491581 FXR1P51114 621 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDAC3-211ENST00000491581 PABPC4Q13310 644 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDAC3-211ENST00000491581 TTF1Q15361 905 aaPredicted RBP10.77□□□□□ -0.69
HDAC3-211ENST00000491581 CATSPERGQ6ZRH7 1159 aa10.77□□□□□ -0.69
HDAC3-211ENST00000491581 TTC6Q86TZ1 520 aa10.77□□□□□ -0.69
HDAC3-211ENST00000491581 NPLOC4Q8TAT6 608 aa10.77□□□□□ -0.69
HDAC3-211ENST00000491581 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.77□□□□□ -0.69
HDAC3-211ENST00000491581 USP6NLQ92738 828 aa10.77□□□□□ -0.69
HDAC3-211ENST00000491581 FBXO28Q9NVF7 368 aa10.77□□□□□ -0.69
HDAC3-211ENST00000491581 ZNFX1Q9P2E3 1918 aaKnown RBP10.76□□□□□ -0.69
HDAC3-211ENST00000491581 HMGCRP04035 888 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 MS4A1P11836 297 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 PRKAR2AP13861 404 aaKnown RBP10.76□□□□□ -0.69
HDAC3-211ENST00000491581 SYN1P17600 705 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 CACNB2Q08289 660 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-211ENST00000491581 MORN1Q5T089 497 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 ANO1Q5XXA6 986 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 CTR9Q6PD62 1173 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 OSBP2Q969R2 916 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 C12orf42Q96LP6 360 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 CRBNQ96SW2 442 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.76□□□□□ -0.69
HDAC3-211ENST00000491581 TBC1D2Q9BYX2 928 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 KIAA1683Q9H0B3 1180 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 CRISPLD2Q9H0B8 497 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 EPB41L4AQ9HCS5 686 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-211ENST00000491581 SLC4A4Q9Y6R1 1079 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 MYH4Q9Y623 1939 aa10.76□□□□□ -0.69
HDAC3-211ENST00000491581 USP17L15C9J2P7 530 aa10.75□□□□□ -0.69
HDAC3-211ENST00000491581 USP17L13C9JLJ4 530 aa10.75□□□□□ -0.69
HDAC3-211ENST00000491581 USP17L11C9JVI0 530 aa10.75□□□□□ -0.69
HDAC3-211ENST00000491581 USP17L18D6R9N7 530 aa10.75□□□□□ -0.69
HDAC3-211ENST00000491581 USP17L22D6RA61 530 aa10.75□□□□□ -0.69
HDAC3-211ENST00000491581 USP17L17D6RBQ6 530 aa10.75□□□□□ -0.69
HDAC3-211ENST00000491581 USP17L19D6RCP7 530 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms