RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 EMILIN3Q9NT22 766 aa19.87■□□□□ 0.77
PDLIM2-217ENST00000491330 HOXC10Q9NYD6 342 aa19.87■□□□□ 0.77
PDLIM2-217ENST00000491330 ARPP21Q9UBL0 812 aaPredicted RBP19.87■□□□□ 0.77
PDLIM2-217ENST00000491330 RABGAP1Q9Y3P9 1069 aa19.87■□□□□ 0.77
PDLIM2-217ENST00000491330 APPP05067 770 aa19.86■□□□□ 0.77
PDLIM2-217ENST00000491330 GJA8P48165 433 aa19.86■□□□□ 0.77
PDLIM2-217ENST00000491330 JAG1P78504 1218 aa19.86■□□□□ 0.77
PDLIM2-217ENST00000491330 GABPAQ06546 454 aa19.86■□□□□ 0.77
PDLIM2-217ENST00000491330 NACAP1Q9BZK3 213 aa19.86■□□□□ 0.77
PDLIM2-217ENST00000491330 IVNS1ABPQ9Y6Y0 642 aa19.86■□□□□ 0.77
PDLIM2-217ENST00000491330 USP17L12C9JPN9 530 aa19.85■□□□□ 0.77
PDLIM2-217ENST00000491330 USP17L21D6R901 530 aa19.85■□□□□ 0.77
PDLIM2-217ENST00000491330 RNF113AO15541 343 aaKnown RBP19.85■□□□□ 0.77
PDLIM2-217ENST00000491330 TFRCP02786 760 aaKnown RBP19.85■□□□□ 0.77
PDLIM2-217ENST00000491330 INHAP05111 366 aa19.85■□□□□ 0.77
PDLIM2-217ENST00000491330 SEPT2Q15019 361 aa19.85■□□□□ 0.77
PDLIM2-217ENST00000491330 MTFR1Q15390 333 aa19.85■□□□□ 0.77
PDLIM2-217ENST00000491330 GIMAP6Q6P9H5 292 aa19.85■□□□□ 0.77
PDLIM2-217ENST00000491330 APPBP2Q92624 585 aa19.85■□□□□ 0.77
PDLIM2-217ENST00000491330 LPAR1Q92633 364 aa19.85■□□□□ 0.77
PDLIM2-217ENST00000491330 MKNK2Q9HBH9 465 aa19.85■□□□□ 0.77
PDLIM2-217ENST00000491330 HMGCRP04035 888 aa19.84■□□□□ 0.77
PDLIM2-217ENST00000491330 SLC3A2P08195 630 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-217ENST00000491330 ELNP15502 786 aa19.84■□□□□ 0.77
PDLIM2-217ENST00000491330 ERVK-9P63128 1117 aa19.84■□□□□ 0.77
PDLIM2-217ENST00000491330 ERVK-24P63145 666 aa19.84■□□□□ 0.77
PDLIM2-217ENST00000491330 C12orf60Q5U649 245 aa19.84■□□□□ 0.77
PDLIM2-217ENST00000491330 WDR78Q5VTH9 848 aa19.84■□□□□ 0.77
PDLIM2-217ENST00000491330 CATSPERGQ6ZRH7 1159 aa19.84■□□□□ 0.77
PDLIM2-217ENST00000491330 MYO5AQ9Y4I1 1855 aaKnown RBP19.84■□□□□ 0.77
PDLIM2-217ENST00000491330 FOCADQ5VW36 1801 aa19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 PRKAB2O43741 272 aa19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 VCAM1P19320 739 aa19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 RGS2P41220 211 aa19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 ICA1Q05084 483 aa19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 COG2Q14746 738 aa19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 PLEKHH3Q7Z736 793 aa19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 U2AF1L4Q8WU68 220 aaKnown RBP19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 DPF3Q92784 378 aa19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 FSD1Q9BTV5 496 aa19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 TANGO6Q9C0B7 1094 aa19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 RPAP3Q9H6T3 665 aaPredicted RBP19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 KANSL2Q9H9L4 492 aa19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 HMX1Q9NP08 348 aaPredicted RBP19.83■□□□□ 0.77
PDLIM2-217ENST00000491330 SGPL1O95470 568 aa19.82■□□□□ 0.76
PDLIM2-217ENST00000491330 XRCC5P13010 732 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-217ENST00000491330 TDO2P48775 406 aa19.82■□□□□ 0.76
PDLIM2-217ENST00000491330 CDK8P49336 464 aa19.82■□□□□ 0.76
PDLIM2-217ENST00000491330 ATP2B2Q01814 1243 aa19.82■□□□□ 0.76
PDLIM2-217ENST00000491330 ANKRD45Q5TZF3 282 aa19.82■□□□□ 0.76
PDLIM2-217ENST00000491330 STRBPQ96SI9 672 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-217ENST00000491330 PUS7LQ9H0K6 701 aaKnown RBP19.82■□□□□ 0.76
PDLIM2-217ENST00000491330 SLC5A4Q9NY91 659 aa19.82■□□□□ 0.76
PDLIM2-217ENST00000491330 RBPJLQ9UBG7 517 aa19.82■□□□□ 0.76
PDLIM2-217ENST00000491330 PCDHB15Q9Y5E8 787 aa19.82■□□□□ 0.76
PDLIM2-217ENST00000491330 CYP2D6P10635 497 aa19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 ZKSCAN1P17029 563 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 MX1P20591 662 aa19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 CYP2B6P20813 491 aa19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 SHROOM1Q2M3G4 852 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 C16orf86Q6ZW13 317 aa19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 MB21D1Q8N884 522 aa19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 ACER1Q8TDN7 264 aa19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 DYNLL2Q96FJ2 89 aa19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 UNC93B1Q9H1C4 597 aa19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 RWDD1Q9H446 243 aaPredicted RBP19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 GOPCQ9HD26 462 aa19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 NR2E3Q9Y5X4 410 aa19.81■□□□□ 0.76
PDLIM2-217ENST00000491330 RPTORQ8N122 1335 aa19.8■□□□□ 0.76
PDLIM2-217ENST00000491330 MINDY4BA8MYZ0 360 aa19.8■□□□□ 0.76
PDLIM2-217ENST00000491330 SBK1Q52WX2 424 aa19.8■□□□□ 0.76
PDLIM2-217ENST00000491330 CTR9Q6PD62 1173 aa19.8■□□□□ 0.76
PDLIM2-217ENST00000491330 LBX2Q6XYB7 198 aa19.8■□□□□ 0.76
PDLIM2-217ENST00000491330 DEFB118Q96PH6 123 aa19.8■□□□□ 0.76
PDLIM2-217ENST00000491330 CRBNQ96SW2 442 aa19.8■□□□□ 0.76
PDLIM2-217ENST00000491330 RAD21O60216 631 aa19.79■□□□□ 0.76
PDLIM2-217ENST00000491330 FARP2O94887 1054 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-217ENST00000491330 HDAC1Q13547 482 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-217ENST00000491330 GPR142Q7Z601 462 aa19.79■□□□□ 0.76
PDLIM2-217ENST00000491330 ZNF444Q8N0Y2 327 aaPredicted RBP19.79■□□□□ 0.76
PDLIM2-217ENST00000491330 TXNRD2Q9NNW7 524 aa19.79■□□□□ 0.76
PDLIM2-217ENST00000491330 GJD2Q9UKL4 321 aa19.79■□□□□ 0.76
PDLIM2-217ENST00000491330 TMX2Q9Y320 296 aa19.79■□□□□ 0.76
PDLIM2-217ENST00000491330 CDK5RAP2Q96SN8 1893 aa19.79■□□□□ 0.76
PDLIM2-217ENST00000491330 MYH1P12882 1939 aa19.78■□□□□ 0.76
PDLIM2-217ENST00000491330 MYH7P12883 1935 aa19.78■□□□□ 0.76
PDLIM2-217ENST00000491330 GPAA1O43292 621 aa19.78■□□□□ 0.76
PDLIM2-217ENST00000491330 AKR1B1P15121 316 aa19.78■□□□□ 0.76
PDLIM2-217ENST00000491330 PPP4R3BQ5MIZ7 849 aa19.78■□□□□ 0.76
PDLIM2-217ENST00000491330 MFSD14CQ5VZR4 134 aa19.78■□□□□ 0.76
PDLIM2-217ENST00000491330 SLC44A5Q8NCS7 719 aa19.78■□□□□ 0.76
PDLIM2-217ENST00000491330 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.78■□□□□ 0.76
PDLIM2-217ENST00000491330 VCPKMTQ9H867 229 aa19.78■□□□□ 0.76
PDLIM2-217ENST00000491330 PHIPQ8WWQ0 1821 aa19.78■□□□□ 0.76
PDLIM2-217ENST00000491330 SLC15A5A6NIM6 579 aa19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 PATL2C9JE40 543 aaKnown RBP19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 WDR46O15213 610 aaKnown RBP19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 STRNO43815 780 aa19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 FLOT1O75955 427 aa19.77■□□□□ 0.76
PDLIM2-217ENST00000491330 GUCY1A2P33402 732 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms